Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
---|---|
Accession | NC_007969 |
Length | 3,059,876 |
Click here to switch to the map view.
The map label for this gene is mhpC [C]
Identifier: 93007091
GI number: 93007091
Start: 2784565
End: 2785401
Strand: Direct
Name: mhpC [C]
Synonym: Pcryo_2267
Alternate gene names: 93007091
Gene position: 2784565-2785401 (Clockwise)
Preceding gene: 93007090
Following gene: 93007094
Centisome position: 91.0
GC content: 42.29
Gene sequence:
>837_bases ATGCCATATGTAAAAGTTGCAACACAAAACGAGCAACCTGTCGAACTGTATTACGAAATCCAAGGTACTGGCAAACCTGT CGTGTTAATTCATGGTTGGCCATTAAGCGGACGGGCATGGGAGTCACAACTTCCTGCGCTGGTTGAGGCTGGTTATCAAG TGATTACGTATGATAGACGTGGTTTTGGGAAATCCTCCCAGCCATGGAATGGTTATGATTACGATACTTTGGCACAAGAT TTAAAAGCCTTGATGGATGAGCTAGATTTAACAAATGCTACTATCGTCGGCTTCTCTATGGGCGGCGGCGAAGTGGCACG TTATCTTGGGAAATATGGTTCTGAGCGTGTCAGTAAAACAGTATTAGCCTCTGCTGTGCCGCCTTATTTATATAAAGCAG ATGACAATCCTGAAGGTGGTCTAGAAAAGCAAGATATTCAGGAATTCTTAGATGGTGTCAGCGGTGACCGTATTGCCTTC CTAAATGATTTTACTAAGCAGTTTTTTACCCCAAAAGATGGCACATTATTAGTTAGTAAACCATTACGCTTATATAACCG TGATATTGCTGCATTTGCCTCCGCCAAAGCTAGCTATGATTGTGTCAAAGCTTTTAGCTATACCGATTTCCGTGATGACC TAAAAGCATTTGATGTACCAAATTTGGTCATTCATGGCGATGCAGATCAAATCGTACCGTTAGAGGTCAGTGGTCAGCGT TCGCACGAAATGATTGCAGATAGTCAACTTCATATCGTTGAAGGCGGCCCGCACGGTATCAATGTGACGCATGCTAAAGA ATTTAATGAAGCTTTAATTGCTTTTTTAAACAGCTAA
Upstream 100 bases:
>100_bases TTATACTAAAAAGCTGACGTTCGCCTTCATTAACCAAAAAACCAAATCAAAAAAGTGCGTCATTATAAAAACTTTATAAT AATATAAAAAGGATCTGAAC
Downstream 100 bases:
>100_bases TGAATTTTGTATATAAACAAGAAAGCGACCTTGAATGGTCGCTTTCTTGTTTATAAGTTATCAGAAAATTCTTAGGTTTA ATCAGCCAATTCTTTTATAA
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: Chloride peroxidase [H]
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MPYVKVATQNEQPVELYYEIQGTGKPVVLIHGWPLSGRAWESQLPALVEAGYQVITYDRRGFGKSSQPWNGYDYDTLAQD LKALMDELDLTNATIVGFSMGGGEVARYLGKYGSERVSKTVLASAVPPYLYKADDNPEGGLEKQDIQEFLDGVSGDRIAF LNDFTKQFFTPKDGTLLVSKPLRLYNRDIAAFASAKASYDCVKAFSYTDFRDDLKAFDVPNLVIHGDADQIVPLEVSGQR SHEMIADSQLHIVEGGPHGINVTHAKEFNEALIAFLNS
Sequences:
>Translated_278_residues MPYVKVATQNEQPVELYYEIQGTGKPVVLIHGWPLSGRAWESQLPALVEAGYQVITYDRRGFGKSSQPWNGYDYDTLAQD LKALMDELDLTNATIVGFSMGGGEVARYLGKYGSERVSKTVLASAVPPYLYKADDNPEGGLEKQDIQEFLDGVSGDRIAF LNDFTKQFFTPKDGTLLVSKPLRLYNRDIAAFASAKASYDCVKAFSYTDFRDDLKAFDVPNLVIHGDADQIVPLEVSGQR SHEMIADSQLHIVEGGPHGINVTHAKEFNEALIAFLNS >Mature_277_residues PYVKVATQNEQPVELYYEIQGTGKPVVLIHGWPLSGRAWESQLPALVEAGYQVITYDRRGFGKSSQPWNGYDYDTLAQDL KALMDELDLTNATIVGFSMGGGEVARYLGKYGSERVSKTVLASAVPPYLYKADDNPEGGLEKQDIQEFLDGVSGDRIAFL NDFTKQFFTPKDGTLLVSKPLRLYNRDIAAFASAKASYDCVKAFSYTDFRDDLKAFDVPNLVIHGDADQIVPLEVSGQRS HEMIADSQLHIVEGGPHGINVTHAKEFNEALIAFLNS
Specific function: 3-hydroxyphenylpropionate degradation. [C]
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial non-heme bromo- and chloro- peroxidases family [H]
Homologues:
Organism=Homo sapiens, GI27597073, Length=119, Percent_Identity=35.2941176470588, Blast_Score=74, Evalue=1e-13, Organism=Escherichia coli, GI87081721, Length=276, Percent_Identity=28.6231884057971, Blast_Score=78, Evalue=8e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =1.11.1.10 [H]
Molecular weight: Translated: 30738; Mature: 30607
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYVKVATQNEQPVELYYEIQGTGKPVVLIHGWPLSGRAWESQLPALVEAGYQVITYDRR CCEEEEECCCCCCEEEEEEEECCCCCEEEEECCCCCCCCHHHHCCHHHHCCCEEEEECCC GFGKSSQPWNGYDYDTLAQDLKALMDELDLTNATIVGFSMGGGEVARYLGKYGSERVSKT CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCHHHHHHH VLASAVPPYLYKADDNPEGGLEKQDIQEFLDGVSGDRIAFLNDFTKQFFTPKDGTLLVSK HHHHCCCCEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEHHHHHHHHHCCCCCCEEEEEC PLRLYNRDIAAFASAKASYDCVKAFSYTDFRDDLKAFDVPNLVIHGDADQIVPLEVSGQR CHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHCCCCCEEEECCCCCEEEEEECCCC SHEMIADSQLHIVEGGPHGINVTHAKEFNEALIAFLNS CHHHHCCCEEEEEECCCCCCEECHHHHHHHHHHHHHCC >Mature Secondary Structure PYVKVATQNEQPVELYYEIQGTGKPVVLIHGWPLSGRAWESQLPALVEAGYQVITYDRR CEEEEECCCCCCEEEEEEEECCCCCEEEEECCCCCCCCHHHHCCHHHHCCCEEEEECCC GFGKSSQPWNGYDYDTLAQDLKALMDELDLTNATIVGFSMGGGEVARYLGKYGSERVSKT CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCHHHHHHH VLASAVPPYLYKADDNPEGGLEKQDIQEFLDGVSGDRIAFLNDFTKQFFTPKDGTLLVSK HHHHCCCCEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEHHHHHHHHHCCCCCCEEEEEC PLRLYNRDIAAFASAKASYDCVKAFSYTDFRDDLKAFDVPNLVIHGDADQIVPLEVSGQR CHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHCCCCCEEEECCCCCEEEEEECCCC SHEMIADSQLHIVEGGPHGINVTHAKEFNEALIAFLNS CHHHHCCCEEEEEECCCCCCEECHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]