The gene/protein map for NC_012490 is currently unavailable.
Definition Psychrobacter cryohalolentis K5 chromosome, complete genome.
Accession NC_007969
Length 3,059,876

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The map label for this gene is ydfG [H]

Identifier: 93007088

GI number: 93007088

Start: 2781755

End: 2782507

Strand: Direct

Name: ydfG [H]

Synonym: Pcryo_2264

Alternate gene names: 93007088

Gene position: 2781755-2782507 (Clockwise)

Preceding gene: 93007087

Following gene: 93007090

Centisome position: 90.91

GC content: 47.41

Gene sequence:

>753_bases
ATGAACGTATTGATTACAGGCGCAAGCGCGGGTTTCGGTAAAGCGCTGGCTGAGCGTTTGATTGCCAATGGTCATCGCGT
GATTGGCTGTGCCAGACGCTTAGACAAACTCAATGCTTTGGCAGAAACTTTGGGCGAGGCGTTTTTACCTGTGGTCATGG
ATGTGAGTGATACAGCGTCTATCCCGCAAGTCATTGCGGATTTGCCTGCTGATTTTAAACAAATCGATGTCTTGGTAAAT
AACGCTGGACTGGCACTTGGTACAGAACCTGCTCACAGTGCTAGTCTTGATGATTGGATGCGTATGACCGATACCAATAT
TAAAGGTTTAATGGCGCTGACTCACGCGGTCTTGCCAGCCATGGTCGCACGCGATAGCGGTTATATCATTAATGTCGGCT
CAATTGCCGGAAGTTGGCCTTATTTTGGTGGTAACGTCTATGGCGCGACCAAAGCCTTTGTCAAACAGTTTAGCTTAAAT
TTGCGTGCGGATCTCATCGGTACGCAAGTGCGCGTGACCAACCTTGAGCCCGGTAATGTTGCCGGAACTGAGTTTTCAAA
CGTGCGCTATCATGGTGATGATGATAAAGCCGCTCAGGTTTACGACGGCTTTAAAACCATGACCGGCGATGATATCGGCG
ATATTTTATTATGGTTGATTGAATCGCCTGCCCATATTAATGTCAATCGCTTGGAAGTCATGCCTGTCGCGCAAACTTAT
AACGGACTAACGATTGCTAAGCAAGACTCTTAA

Upstream 100 bases:

>100_bases
AGCAATTATTTAATAAGTAAGCCAAAGCAGATAAACTAAGACAAGCTGTCGTCTCAAACAACATGACATATGTACAAAAC
ATCAATGATAAGGATATAAG

Downstream 100 bases:

>100_bases
AATTTTAGCTGACTGTTTGGCCTATTAACGTAATTCATAAGACCGAAGCAATATAGTCGCATCTATGTTGCTTCTTTTTT
TGCTACTGACATTCTCTTCA

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MNVLITGASAGFGKALAERLIANGHRVIGCARRLDKLNALAETLGEAFLPVVMDVSDTASIPQVIADLPADFKQIDVLVN
NAGLALGTEPAHSASLDDWMRMTDTNIKGLMALTHAVLPAMVARDSGYIINVGSIAGSWPYFGGNVYGATKAFVKQFSLN
LRADLIGTQVRVTNLEPGNVAGTEFSNVRYHGDDDKAAQVYDGFKTMTGDDIGDILLWLIESPAHINVNRLEVMPVAQTY
NGLTIAKQDS

Sequences:

>Translated_250_residues
MNVLITGASAGFGKALAERLIANGHRVIGCARRLDKLNALAETLGEAFLPVVMDVSDTASIPQVIADLPADFKQIDVLVN
NAGLALGTEPAHSASLDDWMRMTDTNIKGLMALTHAVLPAMVARDSGYIINVGSIAGSWPYFGGNVYGATKAFVKQFSLN
LRADLIGTQVRVTNLEPGNVAGTEFSNVRYHGDDDKAAQVYDGFKTMTGDDIGDILLWLIESPAHINVNRLEVMPVAQTY
NGLTIAKQDS
>Mature_250_residues
MNVLITGASAGFGKALAERLIANGHRVIGCARRLDKLNALAETLGEAFLPVVMDVSDTASIPQVIADLPADFKQIDVLVN
NAGLALGTEPAHSASLDDWMRMTDTNIKGLMALTHAVLPAMVARDSGYIINVGSIAGSWPYFGGNVYGATKAFVKQFSLN
LRADLIGTQVRVTNLEPGNVAGTEFSNVRYHGDDDKAAQVYDGFKTMTGDDIGDILLWLIESPAHINVNRLEVMPVAQTY
NGLTIAKQDS

Specific function: Catalyzes the NADP-dependent oxidation of L-allo- threonine and L-serine [H]

COG id: COG4221

COG function: function code R; Short-chain alcohol dehydrogenase of unknown specificity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI109715829, Length=246, Percent_Identity=30.8943089430894, Blast_Score=121, Evalue=6e-28,
Organism=Homo sapiens, GI20149619, Length=188, Percent_Identity=32.4468085106383, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI150247226, Length=191, Percent_Identity=34.0314136125654, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI157739938, Length=183, Percent_Identity=30.6010928961749, Blast_Score=85, Evalue=8e-17,
Organism=Homo sapiens, GI7657478, Length=191, Percent_Identity=32.9842931937173, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI7706318, Length=257, Percent_Identity=28.7937743190661, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI22507405, Length=180, Percent_Identity=31.6666666666667, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI7705855, Length=206, Percent_Identity=28.6407766990291, Blast_Score=78, Evalue=9e-15,
Organism=Homo sapiens, GI40254992, Length=176, Percent_Identity=29.5454545454545, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI4557649, Length=194, Percent_Identity=30.4123711340206, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI19743808, Length=179, Percent_Identity=32.4022346368715, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI40548397, Length=178, Percent_Identity=29.7752808988764, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI214010158, Length=178, Percent_Identity=29.7752808988764, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI214010156, Length=178, Percent_Identity=29.7752808988764, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI22758144, Length=178, Percent_Identity=29.7752808988764, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI226371731, Length=186, Percent_Identity=29.0322580645161, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI44680136, Length=187, Percent_Identity=30.4812834224599, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI44680133, Length=187, Percent_Identity=30.4812834224599, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI17738292, Length=187, Percent_Identity=30.4812834224599, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI50726952, Length=178, Percent_Identity=30.3370786516854, Blast_Score=65, Evalue=6e-11,
Organism=Homo sapiens, GI31542939, Length=214, Percent_Identity=27.1028037383178, Blast_Score=65, Evalue=7e-11,
Organism=Escherichia coli, GI1787820, Length=248, Percent_Identity=56.4516129032258, Blast_Score=299, Evalue=1e-82,
Organism=Escherichia coli, GI1787335, Length=203, Percent_Identity=33.9901477832512, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI1786812, Length=199, Percent_Identity=29.6482412060301, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI87082100, Length=185, Percent_Identity=35.1351351351351, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1789208, Length=209, Percent_Identity=26.7942583732057, Blast_Score=65, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17560332, Length=209, Percent_Identity=29.1866028708134, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17562910, Length=208, Percent_Identity=31.25, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17565030, Length=217, Percent_Identity=29.4930875576037, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17560150, Length=188, Percent_Identity=30.3191489361702, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI71994604, Length=183, Percent_Identity=30.6010928961749, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17559104, Length=193, Percent_Identity=29.5336787564767, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17538480, Length=209, Percent_Identity=26.7942583732057, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17544670, Length=204, Percent_Identity=26.9607843137255, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71994600, Length=246, Percent_Identity=26.4227642276423, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17562990, Length=189, Percent_Identity=30.1587301587302, Blast_Score=71, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI71997402, Length=171, Percent_Identity=31.5789473684211, Blast_Score=70, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI25152911, Length=194, Percent_Identity=30.4123711340206, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17538486, Length=209, Percent_Identity=27.2727272727273, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17563726, Length=193, Percent_Identity=29.0155440414508, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17562904, Length=213, Percent_Identity=30.5164319248826, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17508895, Length=191, Percent_Identity=30.3664921465969, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17551412, Length=238, Percent_Identity=25.6302521008403, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17560676, Length=199, Percent_Identity=25.6281407035176, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17562906, Length=189, Percent_Identity=26.984126984127, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17562908, Length=187, Percent_Identity=27.807486631016, Blast_Score=65, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=225, Percent_Identity=42.2222222222222, Blast_Score=163, Evalue=3e-41,
Organism=Saccharomyces cerevisiae, GI6322067, Length=220, Percent_Identity=30.4545454545455, Blast_Score=77, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6322227, Length=198, Percent_Identity=28.2828282828283, Blast_Score=75, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6322226, Length=189, Percent_Identity=26.984126984127, Blast_Score=70, Evalue=3e-13,
Organism=Drosophila melanogaster, GI116007236, Length=251, Percent_Identity=28.6852589641434, Blast_Score=108, Evalue=3e-24,
Organism=Drosophila melanogaster, GI21358495, Length=185, Percent_Identity=34.5945945945946, Blast_Score=102, Evalue=3e-22,
Organism=Drosophila melanogaster, GI281364494, Length=253, Percent_Identity=27.6679841897233, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI21357041, Length=200, Percent_Identity=35, Blast_Score=92, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24641388, Length=250, Percent_Identity=30, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI23397609, Length=187, Percent_Identity=34.2245989304813, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24643142, Length=175, Percent_Identity=33.1428571428571, Blast_Score=88, Evalue=4e-18,
Organism=Drosophila melanogaster, GI28571526, Length=180, Percent_Identity=32.7777777777778, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24641232, Length=253, Percent_Identity=28.0632411067194, Blast_Score=85, Evalue=4e-17,
Organism=Drosophila melanogaster, GI116007238, Length=184, Percent_Identity=32.6086956521739, Blast_Score=84, Evalue=7e-17,
Organism=Drosophila melanogaster, GI24648693, Length=252, Percent_Identity=28.1746031746032, Blast_Score=84, Evalue=9e-17,
Organism=Drosophila melanogaster, GI21355889, Length=252, Percent_Identity=28.1746031746032, Blast_Score=84, Evalue=9e-17,
Organism=Drosophila melanogaster, GI28571387, Length=250, Percent_Identity=28.8, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24640442, Length=194, Percent_Identity=32.4742268041237, Blast_Score=81, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24584748, Length=181, Percent_Identity=29.8342541436464, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI161076933, Length=181, Percent_Identity=29.8342541436464, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24644339, Length=206, Percent_Identity=29.6116504854369, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI116007234, Length=251, Percent_Identity=27.0916334661355, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24663911, Length=253, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21355631, Length=169, Percent_Identity=27.810650887574, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI17737361, Length=188, Percent_Identity=28.7234042553192, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24647946, Length=209, Percent_Identity=29.1866028708134, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI45553409, Length=208, Percent_Identity=29.3269230769231, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24647948, Length=208, Percent_Identity=29.3269230769231, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24584744, Length=186, Percent_Identity=29.5698924731183, Blast_Score=64, Evalue=6e-11,
Organism=Drosophila melanogaster, GI28574402, Length=186, Percent_Identity=29.5698924731183, Blast_Score=64, Evalue=7e-11,

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 26717; Mature: 26717

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MNVLITGASAGFGKALAERLIANGHRVIGCARRLDKLNALAETLGEAFLPVVMDVSDTAS
CEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHH
IPQVIADLPADFKQIDVLVNNAGLALGTEPAHSASLDDWMRMTDTNIKGLMALTHAVLPA
HHHHHHHCCCCHHHEEEEEECCCEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHH
MVARDSGYIINVGSIAGSWPYFGGNVYGATKAFVKQFSLNLRADLIGTQVRVTNLEPGNV
HHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCEEEEEECCCCCC
AGTEFSNVRYHGDDDKAAQVYDGFKTMTGDDIGDILLWLIESPAHINVNRLEVMPVAQTY
CCCCCCCEEEECCCCCHHHHHHCHHHCCCCCHHHHHHHHHCCCCCCCCEEEEEEEHHHCC
NGLTIAKQDS
CCEEEEECCC
>Mature Secondary Structure
MNVLITGASAGFGKALAERLIANGHRVIGCARRLDKLNALAETLGEAFLPVVMDVSDTAS
CEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHH
IPQVIADLPADFKQIDVLVNNAGLALGTEPAHSASLDDWMRMTDTNIKGLMALTHAVLPA
HHHHHHHCCCCHHHEEEEEECCCEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHH
MVARDSGYIINVGSIAGSWPYFGGNVYGATKAFVKQFSLNLRADLIGTQVRVTNLEPGNV
HHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCEEEEEECCCCCC
AGTEFSNVRYHGDDDKAAQVYDGFKTMTGDDIGDILLWLIESPAHINVNRLEVMPVAQTY
CCCCCCCEEEECCCCCHHHHHHCHHHCCCCCHHHHHHHHHCCCCCCCCEEEEEEEHHHCC
NGLTIAKQDS
CCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]