Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is 93006913
Identifier: 93006913
GI number: 93006913
Start: 2557587
End: 2558702
Strand: Direct
Name: 93006913
Synonym: Pcryo_2089
Alternate gene names: NA
Gene position: 2557587-2558702 (Clockwise)
Preceding gene: 93006912
Following gene: 93006914
Centisome position: 83.58
GC content: 44.53
Gene sequence:
>1116_bases GTGCCCGCCTCTTCCACTACTCGCCCGCCCATAGAGTCAACGTCCACGCTCAATCAGTCCTTAGCAGGGTCAGAGCCACC AACAGGGTCACCAGAGACTCCGCCTTCAAGACCAAATCGTCCTAAACCAAATCGTTTAAAGCTTACTTATGATATCGTGA TGATTATCGCCATCAGTATTGATTTATTGGTTATCAGTACTGATGCTATTTTGATGAGTAGTTTTAGTAGTGACGCGGCA AACTGGCTTGGAATTTCCAATCAATTAATCTGGTATCAAAGTAATATCCATGACTCATTACGTACCGTGGGCGGCTTTTT TACCTTGTTTTTGATTGCAGAGCTGCTATTACGCTGGGCGATTGCCATCAAAGAAAAAATCTATTACCGCTGGTTCTTTT TTCCTTTTGTGCATTGGTACGAGGTATTAGGCTGTTTTCCGCAATTGCGTGCGCTGCGATTATTTCGCGTTGTTATTATC GGACAACGCCTATATCAACTAGGCTATCAAGTATTGCCTCAGCCATGGATCAATAGAATCAACTTCTATATCGATGTAGT ATTAGAGGAGTTGTCTGACCGCGTTATTTTAACGACCATTCAGACCTTTCGGCAAGAGCTTACTGATCCGAAGAGGCAAA AATCGTTTATCGACTCTACCATCTCGCGCAATCGTGATGAGATTGAAGCCGCTATATTGTCACTACTGCGTAAAGAGATG ACACCAAAACTACAAGCTCTAACTGAGTCAGCAGGTGGCGGCGCTATTATCGCTAGTGAAGTGGGCAATGCGATCCAAGA TGGGCTTGCCAATACGCCAGAATTGCGCCGCTATCTGCGTATGATACCTATTGCGGGTAGCTTGATTGAATCACAGCTAC AGCATGTGGGGCAAAATATTGGTGAAAATGTGGTTTATGCGCTCAACGAGCGTCTGCTTGACGCCGAACGCCTTGACGCA TTGATGGTCGCTATCGCTAGTGGTATCGCTCAAATCGATACAGACAATCCGGCATTAGACCATCTCATTGCTAGCATTAT CGATGATGGTCTGACAGAATTTGAAGCGCAAATAAAAGTTCAACAGTGGAAGCATCAAGACTTGCTTAAATTATAG
Upstream 100 bases:
>100_bases TTGATAATGTGAATGACCGTTAGAACGCTGTGTTGATTTTGTTGTGATTGGTGTAATACTTCTCATGACTGCTGCCATTT ATTACTTATAAGGACTGACT
Downstream 100 bases:
>100_bases AATCTTTAAAGCTTTAAAATAATGATTTGATAAGAAAAATATCACCACGAATATAGCATTACGATTACCTTTTGAGGATG TAGATTATGACCATTGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MPASSTTRPPIESTSTLNQSLAGSEPPTGSPETPPSRPNRPKPNRLKLTYDIVMIIAISIDLLVISTDAILMSSFSSDAA NWLGISNQLIWYQSNIHDSLRTVGGFFTLFLIAELLLRWAIAIKEKIYYRWFFFPFVHWYEVLGCFPQLRALRLFRVVII GQRLYQLGYQVLPQPWINRINFYIDVVLEELSDRVILTTIQTFRQELTDPKRQKSFIDSTISRNRDEIEAAILSLLRKEM TPKLQALTESAGGGAIIASEVGNAIQDGLANTPELRRYLRMIPIAGSLIESQLQHVGQNIGENVVYALNERLLDAERLDA LMVAIASGIAQIDTDNPALDHLIASIIDDGLTEFEAQIKVQQWKHQDLLKL
Sequences:
>Translated_371_residues MPASSTTRPPIESTSTLNQSLAGSEPPTGSPETPPSRPNRPKPNRLKLTYDIVMIIAISIDLLVISTDAILMSSFSSDAA NWLGISNQLIWYQSNIHDSLRTVGGFFTLFLIAELLLRWAIAIKEKIYYRWFFFPFVHWYEVLGCFPQLRALRLFRVVII GQRLYQLGYQVLPQPWINRINFYIDVVLEELSDRVILTTIQTFRQELTDPKRQKSFIDSTISRNRDEIEAAILSLLRKEM TPKLQALTESAGGGAIIASEVGNAIQDGLANTPELRRYLRMIPIAGSLIESQLQHVGQNIGENVVYALNERLLDAERLDA LMVAIASGIAQIDTDNPALDHLIASIIDDGLTEFEAQIKVQQWKHQDLLKL >Mature_370_residues PASSTTRPPIESTSTLNQSLAGSEPPTGSPETPPSRPNRPKPNRLKLTYDIVMIIAISIDLLVISTDAILMSSFSSDAAN WLGISNQLIWYQSNIHDSLRTVGGFFTLFLIAELLLRWAIAIKEKIYYRWFFFPFVHWYEVLGCFPQLRALRLFRVVIIG QRLYQLGYQVLPQPWINRINFYIDVVLEELSDRVILTTIQTFRQELTDPKRQKSFIDSTISRNRDEIEAAILSLLRKEMT PKLQALTESAGGGAIIASEVGNAIQDGLANTPELRRYLRMIPIAGSLIESQLQHVGQNIGENVVYALNERLLDAERLDAL MVAIASGIAQIDTDNPALDHLIASIIDDGLTEFEAQIKVQQWKHQDLLKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41843; Mature: 41712
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPASSTTRPPIESTSTLNQSLAGSEPPTGSPETPPSRPNRPKPNRLKLTYDIVMIIAISI CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHH DLLVISTDAILMSSFSSDAANWLGISNQLIWYQSNIHDSLRTVGGFFTLFLIAELLLRWA HHHEEEHHHHHHHHHCCHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH IAIKEKIYYRWFFFPFVHWYEVLGCFPQLRALRLFRVVIIGQRLYQLGYQVLPQPWINRI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH NFYIDVVLEELSDRVILTTIQTFRQELTDPKRQKSFIDSTISRNRDEIEAAILSLLRKEM HHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH TPKLQALTESAGGGAIIASEVGNAIQDGLANTPELRRYLRMIPIAGSLIESQLQHVGQNI CHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GENVVYALNERLLDAERLDALMVAIASGIAQIDTDNPALDHLIASIIDDGLTEFEAQIKV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QQWKHQDLLKL HHHHHHHHHCC >Mature Secondary Structure PASSTTRPPIESTSTLNQSLAGSEPPTGSPETPPSRPNRPKPNRLKLTYDIVMIIAISI CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHH DLLVISTDAILMSSFSSDAANWLGISNQLIWYQSNIHDSLRTVGGFFTLFLIAELLLRWA HHHEEEHHHHHHHHHCCHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH IAIKEKIYYRWFFFPFVHWYEVLGCFPQLRALRLFRVVIIGQRLYQLGYQVLPQPWINRI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH NFYIDVVLEELSDRVILTTIQTFRQELTDPKRQKSFIDSTISRNRDEIEAAILSLLRKEM HHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH TPKLQALTESAGGGAIIASEVGNAIQDGLANTPELRRYLRMIPIAGSLIESQLQHVGQNI CHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GENVVYALNERLLDAERLDALMVAIASGIAQIDTDNPALDHLIASIIDDGLTEFEAQIKV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QQWKHQDLLKL HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA