Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is 93006802
Identifier: 93006802
GI number: 93006802
Start: 2438779
End: 2439429
Strand: Direct
Name: 93006802
Synonym: Pcryo_1978
Alternate gene names: NA
Gene position: 2438779-2439429 (Clockwise)
Preceding gene: 93006801
Following gene: 93006810
Centisome position: 79.7
GC content: 42.24
Gene sequence:
>651_bases ATGGATAGCTGTCTTATTATGAAAACTCTTCCCTCTACCTTTACCTTTACCTTTATAAAATCAAAACCATATTTTCAGGC TGTATCTGCCATTTTTTTAAGCTTATCACTGTTGATTGCCTGCAAAAAAACACCAGAGCATGAGACAGCTAATGAAACAA CCACAGAACTAACAACTCAAACGACACCTGTGACTTCCAACATTAATGCACCCAATGTTGCTGATGATATTAAAACCAAC GCGTCTGCTGCGAATCCAGAACAAGATGTGAACTTAACGGAGCTAGAGGATAATATTGGCACAACGGATACCTCTGTCAT TGCCCCTGCTCCAGCGCCCAATCCAGAGCAAGCCATTAAAGGCGCGCAAATCACTGACGTTAAATATCGAAATGCCTCAG GCGAATCATTATCAGTCGTTTTTGAGACTTCAGCAGCGGGCATGCTTAATGCCATCATCACCTTACCGAACAAACCTAAA ATGACCTTGAGCGCGCCTGAGGGTCAAGGTAATAATCCTACCTATCGCTCAAGCGATGGCAATGTTCAGCTAGTTAGTCA TGCTGGCGGTGGTACGGTAGATTTTATTCAAAATAATAAAATGACAAGCTTTGATGCCATTAGTGCCGATGCAGAAGTGA TTACTGAGTAA
Upstream 100 bases:
>100_bases CCAATCGGGCGCGGCTACATAAAGTACATAAGCATAAAACACGTCAAGCAGTAATTTAGGTTCAGTACCTTAGCTATATG CCTAATTATGACCCTCACTA
Downstream 100 bases:
>100_bases GCTTTATAAGTATAAAAATATGTCGTAAAGTTAGTGGAAATGGCAATAAAAAAGGCTGCAAACGTTGATATCGTTGCTGC CTTTTTTATTGCCTAACTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MDSCLIMKTLPSTFTFTFIKSKPYFQAVSAIFLSLSLLIACKKTPEHETANETTTELTTQTTPVTSNINAPNVADDIKTN ASAANPEQDVNLTELEDNIGTTDTSVIAPAPAPNPEQAIKGAQITDVKYRNASGESLSVVFETSAAGMLNAIITLPNKPK MTLSAPEGQGNNPTYRSSDGNVQLVSHAGGGTVDFIQNNKMTSFDAISADAEVITE
Sequences:
>Translated_216_residues MDSCLIMKTLPSTFTFTFIKSKPYFQAVSAIFLSLSLLIACKKTPEHETANETTTELTTQTTPVTSNINAPNVADDIKTN ASAANPEQDVNLTELEDNIGTTDTSVIAPAPAPNPEQAIKGAQITDVKYRNASGESLSVVFETSAAGMLNAIITLPNKPK MTLSAPEGQGNNPTYRSSDGNVQLVSHAGGGTVDFIQNNKMTSFDAISADAEVITE >Mature_216_residues MDSCLIMKTLPSTFTFTFIKSKPYFQAVSAIFLSLSLLIACKKTPEHETANETTTELTTQTTPVTSNINAPNVADDIKTN ASAANPEQDVNLTELEDNIGTTDTSVIAPAPAPNPEQAIKGAQITDVKYRNASGESLSVVFETSAAGMLNAIITLPNKPK MTLSAPEGQGNNPTYRSSDGNVQLVSHAGGGTVDFIQNNKMTSFDAISADAEVITE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22874; Mature: 22874
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSCLIMKTLPSTFTFTFIKSKPYFQAVSAIFLSLSLLIACKKTPEHETANETTTELTTQ CCCEEEEEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEEEC TTPVTSNINAPNVADDIKTNASAANPEQDVNLTELEDNIGTTDTSVIAPAPAPNPEQAIK CCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCEEEECCCCCCHHHHHC GAQITDVKYRNASGESLSVVFETSAAGMLNAIITLPNKPKMTLSAPEGQGNNPTYRSSDG CCEEEEEEECCCCCCEEEEEEECCCCCEEEEEEECCCCCCEEEECCCCCCCCCCEECCCC NVQLVSHAGGGTVDFIQNNKMTSFDAISADAEVITE CEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHCC >Mature Secondary Structure MDSCLIMKTLPSTFTFTFIKSKPYFQAVSAIFLSLSLLIACKKTPEHETANETTTELTTQ CCCEEEEEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEEEC TTPVTSNINAPNVADDIKTNASAANPEQDVNLTELEDNIGTTDTSVIAPAPAPNPEQAIK CCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCEEEECCCCCCHHHHHC GAQITDVKYRNASGESLSVVFETSAAGMLNAIITLPNKPKMTLSAPEGQGNNPTYRSSDG CCEEEEEEECCCCCCEEEEEEECCCCCEEEEEEECCCCCCEEEECCCCCCCCCCEECCCC NVQLVSHAGGGTVDFIQNNKMTSFDAISADAEVITE CEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA