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The map label for this gene is ygfA [H]

Identifier: 93006719

GI number: 93006719

Start: 2341303

End: 2342013

Strand: Direct

Name: ygfA [H]

Synonym: Pcryo_1895

Alternate gene names: 93006719

Gene position: 2341303-2342013 (Clockwise)

Preceding gene: 93006715

Following gene: 93006720

Centisome position: 76.52

GC content: 45.85

Gene sequence:

>711_bases
ATGTCTAAGAGCACCAGCCAACAACAATCTACCAGTTCGCTACCTGAGTTATCTACCGTGAGCAGTCAAGCTACTAATAA
TGTGCAAATAGCTGATACCATTAGCAACCCACCCAGACGCCATTTCACTCGCCAGCGTCGTAGGCTCTTGGATAATGAGC
GTAAACAATACGCACGCATGGCAAGCTTGCATTTAATCAAGCTACAGCAACGCTTACCGCCGAATGCACGTATCGGCTTA
TATTATGATGGCTTTGGTGAGCTACCCACTCAGCCAATTTTGGATTGGTGTCAACGCTTAGGCTATTTGCCGTATTTGCC
GGTGGTCGGCTCATTTGGTCGTACTAGCAATGGCTTGGAAGATAAACGATTGCGCTTTGTGCCTATTTATCATGCAAAGT
TATTAAATGTACCGACACGCATTCATAGCTTAGGCATGAAGCAAAACCATCATCGCCGATTGCTATGGGCAGCAGAATTA
GATGTGATTATTTGTCCGTTAGTGGCGGTCGATAAAAATGGCAATCGTATGGGTATGGGTGGTGGCTTTTATGACACAAC
TCTAGGTAATAGCTATCGGTCTGGCGCTGAAAAACCGCTAAAGATAGGCTGGTGCTATGACTTTCAAGTGGTTGAGCAAC
TAGAGCGTCAATCATGGGATGTGCCGTTAGATGCCATAATTACGCCAAGTGGCTTGAGGTGGTTTCGATGA

Upstream 100 bases:

>100_bases
AAAGTGCAACAGCTGCTGCACACAAAGAAAAATACGCTGTAAAGTGGCGTTATGATAGCATGACTTATCACAAATTTCTC
CACGTCCGTGAGGGTAACTG

Downstream 100 bases:

>100_bases
ATGATAATAAGAAATCTCTAGATACTAACTCTAGTGCAGAGAATGTCGAACAACATTTGCAAGAGTTAGAAAAAGCGGAT
TATGAGCGGCTTTATTATAG

Product: 5-formyltetrahydrofolate cyclo-ligase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MSKSTSQQQSTSSLPELSTVSSQATNNVQIADTISNPPRRHFTRQRRRLLDNERKQYARMASLHLIKLQQRLPPNARIGL
YYDGFGELPTQPILDWCQRLGYLPYLPVVGSFGRTSNGLEDKRLRFVPIYHAKLLNVPTRIHSLGMKQNHHRRLLWAAEL
DVIICPLVAVDKNGNRMGMGGGFYDTTLGNSYRSGAEKPLKIGWCYDFQVVEQLERQSWDVPLDAIITPSGLRWFR

Sequences:

>Translated_236_residues
MSKSTSQQQSTSSLPELSTVSSQATNNVQIADTISNPPRRHFTRQRRRLLDNERKQYARMASLHLIKLQQRLPPNARIGL
YYDGFGELPTQPILDWCQRLGYLPYLPVVGSFGRTSNGLEDKRLRFVPIYHAKLLNVPTRIHSLGMKQNHHRRLLWAAEL
DVIICPLVAVDKNGNRMGMGGGFYDTTLGNSYRSGAEKPLKIGWCYDFQVVEQLERQSWDVPLDAIITPSGLRWFR
>Mature_235_residues
SKSTSQQQSTSSLPELSTVSSQATNNVQIADTISNPPRRHFTRQRRRLLDNERKQYARMASLHLIKLQQRLPPNARIGLY
YDGFGELPTQPILDWCQRLGYLPYLPVVGSFGRTSNGLEDKRLRFVPIYHAKLLNVPTRIHSLGMKQNHHRRLLWAAELD
VIICPLVAVDKNGNRMGMGGGFYDTTLGNSYRSGAEKPLKIGWCYDFQVVEQLERQSWDVPLDAIITPSGLRWFR

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family [H]

Homologues:

Organism=Escherichia coli, GI1789278, Length=193, Percent_Identity=36.2694300518135, Blast_Score=94, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002698 [H]

Pfam domain/function: PF01812 5-FTHF_cyc-lig [H]

EC number: NA

Molecular weight: Translated: 27007; Mature: 26876

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKSTSQQQSTSSLPELSTVSSQATNNVQIADTISNPPRRHFTRQRRRLLDNERKQYARM
CCCCCCHHHHHHCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
ASLHLIKLQQRLPPNARIGLYYDGFGELPTQPILDWCQRLGYLPYLPVVGSFGRTSNGLE
HHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCC
DKRLRFVPIYHAKLLNVPTRIHSLGMKQNHHRRLLWAAELDVIICPLVAVDKNGNRMGMG
CCCEEEEEEHHHHHHCCHHHHHHHCCCCCCCEEEEEEECCCEEEECEEEECCCCCEECCC
GGFYDTTLGNSYRSGAEKPLKIGWCYDFQVVEQLERQSWDVPLDAIITPSGLRWFR
CCCHHHHCCCCHHCCCCCCEEEEEEECHHHHHHHHHCCCCCCHHEEECCCCCCCCC
>Mature Secondary Structure 
SKSTSQQQSTSSLPELSTVSSQATNNVQIADTISNPPRRHFTRQRRRLLDNERKQYARM
CCCCCHHHHHHCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
ASLHLIKLQQRLPPNARIGLYYDGFGELPTQPILDWCQRLGYLPYLPVVGSFGRTSNGLE
HHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCC
DKRLRFVPIYHAKLLNVPTRIHSLGMKQNHHRRLLWAAELDVIICPLVAVDKNGNRMGMG
CCCEEEEEEHHHHHHCCHHHHHHHCCCCCCCEEEEEEECCCEEEECEEEECCCCCEECCC
GGFYDTTLGNSYRSGAEKPLKIGWCYDFQVVEQLERQSWDVPLDAIITPSGLRWFR
CCCHHHHCCCCHHCCCCCCEEEEEEECHHHHHHHHHCCCCCCHHEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]