Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is 93006594
Identifier: 93006594
GI number: 93006594
Start: 2190772
End: 2191512
Strand: Direct
Name: 93006594
Synonym: Pcryo_1770
Alternate gene names: NA
Gene position: 2190772-2191512 (Clockwise)
Preceding gene: 93006589
Following gene: 93006595
Centisome position: 71.6
GC content: 42.38
Gene sequence:
>741_bases ATGTATAGCCATGTTTTAAATAGGCTTTCAAGCTCGCTATGGGCGACTTGGCAGACCCGTCTGTTAGTGTTCTCAGTACT TCTTATTTGTATTCTTACTGGCAGCAATGAAGCGCTTGCTCATGCTGTAACCGCAGGGGATAAAGGATATATTCAGGAGA TTTCAGGAGTCAATATTTTACCCTTTATGTACTTGGGCGCTAAGCATATGATAACGGGGTATGACCACATACTGTTTCTC TTCGGGGTCATCTTTTTTCTCTACCGTATGAAGCACATTGGTATCTATGTGAGCCTATTTGCACTAGGTCATTCCACAAC GATGATTTTAGGCGTGTACTTCAACATCGGTATGAACAGTTATCTGATTGATGCCATTATTGGTCTCTCTGTTGTTTACA AAGCTTTAGATAACATTGGCGCGTATCAAACATGGTTCGGGTATCAACCAAACACCAAAATAGCAGTGCTTATATTTGGC CTTTTCCATGGCTTTGGGTTATCAACTAAAATTCTTGAATATGAGATGTCACCTGACGGTCTACTTCCTAACCTGCTCGC ATTTAACATGGGTGTGGAAATTGGGCAACTACTGGCTCTAGCGATCATATTGATTGGTATGAGCTACTGGCGACGCACGT CAAGTTTCATCCGTAACGCCTATACCGCCAACGTTGCCATGATGAGCGCAGGATTTATTTTAGTGGGCATGCAGCTCACT GGCTATTTAATGTCTCAATAA
Upstream 100 bases:
>100_bases TAGTAACACAAATCATACTTACTCCATTGGTTAGGATTAACTGTTCTTATCGCATTGCATCACGCAACACATTCATTATT TTCAGACCACAGGATTCTTA
Downstream 100 bases:
>100_bases TCTAAGGATTTCTAATATGTATAACAGCGATACCCCCTTGCAAGCTGAACTTCCCTCTTCAAAGCAGCTTATGAAATCTA CTGTTCTGGCTGTAATTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MYSHVLNRLSSSLWATWQTRLLVFSVLLICILTGSNEALAHAVTAGDKGYIQEISGVNILPFMYLGAKHMITGYDHILFL FGVIFFLYRMKHIGIYVSLFALGHSTTMILGVYFNIGMNSYLIDAIIGLSVVYKALDNIGAYQTWFGYQPNTKIAVLIFG LFHGFGLSTKILEYEMSPDGLLPNLLAFNMGVEIGQLLALAIILIGMSYWRRTSSFIRNAYTANVAMMSAGFILVGMQLT GYLMSQ
Sequences:
>Translated_246_residues MYSHVLNRLSSSLWATWQTRLLVFSVLLICILTGSNEALAHAVTAGDKGYIQEISGVNILPFMYLGAKHMITGYDHILFL FGVIFFLYRMKHIGIYVSLFALGHSTTMILGVYFNIGMNSYLIDAIIGLSVVYKALDNIGAYQTWFGYQPNTKIAVLIFG LFHGFGLSTKILEYEMSPDGLLPNLLAFNMGVEIGQLLALAIILIGMSYWRRTSSFIRNAYTANVAMMSAGFILVGMQLT GYLMSQ >Mature_246_residues MYSHVLNRLSSSLWATWQTRLLVFSVLLICILTGSNEALAHAVTAGDKGYIQEISGVNILPFMYLGAKHMITGYDHILFL FGVIFFLYRMKHIGIYVSLFALGHSTTMILGVYFNIGMNSYLIDAIIGLSVVYKALDNIGAYQTWFGYQPNTKIAVLIFG LFHGFGLSTKILEYEMSPDGLLPNLLAFNMGVEIGQLLALAIILIGMSYWRRTSSFIRNAYTANVAMMSAGFILVGMQLT GYLMSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27363; Mature: 27363
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSHVLNRLSSSLWATWQTRLLVFSVLLICILTGSNEALAHAVTAGDKGYIQEISGVNIL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHCCCCCH PFMYLGAKHMITGYDHILFLFGVIFFLYRMKHIGIYVSLFALGHSTTMILGVYFNIGMNS HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHCCCHH YLIDAIIGLSVVYKALDNIGAYQTWFGYQPNTKIAVLIFGLFHGFGLSTKILEYEMSPDG HHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCC LLPNLLAFNMGVEIGQLLALAIILIGMSYWRRTSSFIRNAYTANVAMMSAGFILVGMQLT CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHH GYLMSQ HHHHCC >Mature Secondary Structure MYSHVLNRLSSSLWATWQTRLLVFSVLLICILTGSNEALAHAVTAGDKGYIQEISGVNIL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHCCCCCH PFMYLGAKHMITGYDHILFLFGVIFFLYRMKHIGIYVSLFALGHSTTMILGVYFNIGMNS HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHCCCHH YLIDAIIGLSVVYKALDNIGAYQTWFGYQPNTKIAVLIFGLFHGFGLSTKILEYEMSPDG HHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCC LLPNLLAFNMGVEIGQLLALAIILIGMSYWRRTSSFIRNAYTANVAMMSAGFILVGMQLT CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHH GYLMSQ HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA