Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is yibN [C]
Identifier: 93006560
GI number: 93006560
Start: 2151268
End: 2151723
Strand: Direct
Name: yibN [C]
Synonym: Pcryo_1736
Alternate gene names: 93006560
Gene position: 2151268-2151723 (Clockwise)
Preceding gene: 93006559
Following gene: 93006561
Centisome position: 70.31
GC content: 44.3
Gene sequence:
>456_bases TTGGATCGTGCGCTGGAATTTGTGGGCAACCACCCGTTTTTATTTGGTATATTAGCCGTACTAGCCGTGCTATTTTTTGC TATTGAAAACAAACGTAGCGGTAAAAAGATTTCACCCAATACCCTTGGTATGATGGTGAACTCGCAAAATGCGCAGCTTA TCGATATCCGTGCCAAAAAGAAGTTTGTCACCGGTTATATCCAAGGCAGTCGCAATATCCCATTTACTGAGCTAAAAGAC CGCATTGAGGAAATTCGTGCGATTGAACAGCCAGTGATTATTATCTGCGATATGGGCGTACAAGCAGGTGCTGCCATTCA GATGATTGGTAAAGAAAACGTCTATCGCTTAGAAGGCGGTGTTGGTGGCTGGCAAGCTGCTGGAATGCCACTTGTTGGCA TAAAGGATACTAAGCCGAAGACTAAAGTCAAAGCAAAACCGAGCTTGCATAAGTAG
Upstream 100 bases:
>100_bases CGTTTACTATGGATAGGCTAATCGGTATAATAGCGCCTTGTTCAATCCATTAGGCTGTCTTCTCAGCGTAATAGAACACT TATTTTTTTGGAGGTATGGT
Downstream 100 bases:
>100_bases TTTGATAGCGCGCTTTATTAAACTATGACTTACTATCTATCGGTAGTGAATAAAAAAGACACCTCTTCATAGGGTGTTTT TTTTATGTGGCATTTATGAT
Product: rhodanese-like protein
Products: NA
Alternate protein names: Rhodanese Domain Protein; Rhodanese-Like Protein; Rhodanese-Related Sulfurtransferase; Rhodanese-Like Domain-Containing Protein; Rhodanese-Like Domain Protein; Rhodanese Sulfur Transferase; Thiosulfate Sulfurtransferase; Rhodanese-Like Sulfurtransferase Protein; Rhodanese Related Sulfurtransferase-Like Protein; Transmembrane Protein; Rhodanese Domain Containing Protein; PspE Protein
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MDRALEFVGNHPFLFGILAVLAVLFFAIENKRSGKKISPNTLGMMVNSQNAQLIDIRAKKKFVTGYIQGSRNIPFTELKD RIEEIRAIEQPVIIICDMGVQAGAAIQMIGKENVYRLEGGVGGWQAAGMPLVGIKDTKPKTKVKAKPSLHK
Sequences:
>Translated_151_residues MDRALEFVGNHPFLFGILAVLAVLFFAIENKRSGKKISPNTLGMMVNSQNAQLIDIRAKKKFVTGYIQGSRNIPFTELKD RIEEIRAIEQPVIIICDMGVQAGAAIQMIGKENVYRLEGGVGGWQAAGMPLVGIKDTKPKTKVKAKPSLHK >Mature_151_residues MDRALEFVGNHPFLFGILAVLAVLFFAIENKRSGKKISPNTLGMMVNSQNAQLIDIRAKKKFVTGYIQGSRNIPFTELKD RIEEIRAIEQPVIIICDMGVQAGAAIQMIGKENVYRLEGGVGGWQAAGMPLVGIKDTKPKTKVKAKPSLHK
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790040, Length=142, Percent_Identity=30.2816901408451, Blast_Score=61, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16592; Mature: 16592
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRALEFVGNHPFLFGILAVLAVLFFAIENKRSGKKISPNTLGMMVNSQNAQLIDIRAKK CCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCEEEEEEECCCCEEEEEECCC KFVTGYIQGSRNIPFTELKDRIEEIRAIEQPVIIICDMGVQAGAAIQMIGKENVYRLEGG EEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEECCCCEEEEECC VGGWQAAGMPLVGIKDTKPKTKVKAKPSLHK CCCCHHCCCCEECCCCCCCCCEEECCCCCCC >Mature Secondary Structure MDRALEFVGNHPFLFGILAVLAVLFFAIENKRSGKKISPNTLGMMVNSQNAQLIDIRAKK CCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCEEEEEEECCCCEEEEEECCC KFVTGYIQGSRNIPFTELKDRIEEIRAIEQPVIIICDMGVQAGAAIQMIGKENVYRLEGG EEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEECCCCEEEEECC VGGWQAAGMPLVGIKDTKPKTKVKAKPSLHK CCCCHHCCCCEECCCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA