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The map label for this gene is ygeX [H]

Identifier: 93006557

GI number: 93006557

Start: 2148763

End: 2149113

Strand: Direct

Name: ygeX [H]

Synonym: Pcryo_1733

Alternate gene names: 93006557

Gene position: 2148763-2149113 (Clockwise)

Preceding gene: 93006549

Following gene: 93006559

Centisome position: 70.22

GC content: 36.75

Gene sequence:

>351_bases
TTGGTCTCGTTACCACTGCTGGCAACTAAACTCGGCGTTAAATCAACTTTAGTAAAAGATGAATCAAAGCGTTTTGGACT
TAATGCCTATAAAGCTCTAGGTGGTTCCTACGCGCTAGGATGCATATTAGCAAAACACCTTAATATAGATATAGTCGATA
TTGATATAGCAACGGTCGACTCTAAGCTTGGTAAACCTTTGGTATTTGCTACTGCAATAGTAGGTAATCATGGTACTGGC
GTTGCATGGGCTGCGTTAAAAACTAAGACAGCCTTATTAATCATGACTCAAATAACACCTCTAGATTATAATTTGGATTA
TTTAATACAAAAAAGCCTTCAAACAAATTAG

Upstream 100 bases:

>100_bases
TAATTTTTATACTGGTCAGAACTCACCTCTATTCACTGTAAAAATTGCTAAGCCAGCTCATGCATTTCATTGTTAAATTG
ATGGGTAGCAACCAACACCT

Downstream 100 bases:

>100_bases
CCCAATCGTAGCGCTTGATTCATCTGAAGGCTTTCTTGATAGCTTTTTTTCTAAGGTGCCGATTTTAAGGTATCAGTTTA
AAGAAATGCTGACGATAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: Diaminopropionatase; Alpha,beta-diaminopropionate ammonia-lyase [H]

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MVSLPLLATKLGVKSTLVKDESKRFGLNAYKALGGSYALGCILAKHLNIDIVDIDIATVDSKLGKPLVFATAIVGNHGTG
VAWAALKTKTALLIMTQITPLDYNLDYLIQKSLQTN

Sequences:

>Translated_116_residues
MVSLPLLATKLGVKSTLVKDESKRFGLNAYKALGGSYALGCILAKHLNIDIVDIDIATVDSKLGKPLVFATAIVGNHGTG
VAWAALKTKTALLIMTQITPLDYNLDYLIQKSLQTN
>Mature_116_residues
MVSLPLLATKLGVKSTLVKDESKRFGLNAYKALGGSYALGCILAKHLNIDIVDIDIATVDSKLGKPLVFATAIVGNHGTG
VAWAALKTKTALLIMTQITPLDYNLDYLIQKSLQTN

Specific function: Catalyzes the alpha,beta-elimination reaction of both L- and D-alpha,beta-diaminopropionate, the most suitable substrates to form pyruvate and ammonia. The L- and D-isomers of serine are also degraded, though slowly; it is the only serine dehydratase whic

COG id: COG1171

COG function: function code E; Threonine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789235, Length=85, Percent_Identity=49.4117647058824, Blast_Score=86, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010081
- InterPro:   IPR019871
- InterPro:   IPR001926 [H]

Pfam domain/function: PF00291 PALP [H]

EC number: =4.3.1.15 [H]

Molecular weight: Translated: 12400; Mature: 12400

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSLPLLATKLGVKSTLVKDESKRFGLNAYKALGGSYALGCILAKHLNIDIVDIDIATVD
CCCCCHHHHHCCCHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCEEEEEEEEEECC
SKLGKPLVFATAIVGNHGTGVAWAALKTKTALLIMTQITPLDYNLDYLIQKSLQTN
HHCCCCEEEEEEEECCCCCCEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MVSLPLLATKLGVKSTLVKDESKRFGLNAYKALGGSYALGCILAKHLNIDIVDIDIATVD
CCCCCHHHHHCCCHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCEEEEEEEEEECC
SKLGKPLVFATAIVGNHGTGVAWAALKTKTALLIMTQITPLDYNLDYLIQKSLQTN
HHCCCCEEEEEEEECCCCCCEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]