Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is 93006517
Identifier: 93006517
GI number: 93006517
Start: 2090699
End: 2093254
Strand: Direct
Name: 93006517
Synonym: Pcryo_1693
Alternate gene names: NA
Gene position: 2090699-2093254 (Clockwise)
Preceding gene: 93006516
Following gene: 93006518
Centisome position: 68.33
GC content: 44.48
Gene sequence:
>2556_bases ATGCCTTTAGCTGTATTGGCACTGCTATCAGCTATGGCAATATTACCTGCCTGTAGCACTGTCTCTGTCAATAGACAGGC CTCTGCCAAGACGATTTCGGCGCAGCGAGGTAATATTGTCACTGATAACAAGCTCAGTAGTGATACCGCATCATTATTAT TGTCAGCAGGGCTCAATGAGCAAGCCTGTATGCAGCAGTTTGAGCTTTGCTTAACGCAGCTTGCTGATAGCATGCTTAAT AGGCACTATCGCCCAGCACTGGCTGCCTTTTCAGAGTTACACTATGCAAAAGCGCGCCAACTCGCTACCTCAAAAAGCTG TAGCAATGCGCTTGCCCGTCCGCCACTTGATCCCTATTATGCCAATGCACCTTTAGATGATGCTGAAGCTAAAGCGCAGC AGAGCAAAACCGAGATATGTTTAATCGACTATCAAGAGCGTCTCTTTGATGCCATCAAATCCAGCTATACCTACTTATTC TATGACAGTCTAGAGCATGATTTTGAAGGAGCCGATGAAAAAGTAAGTGGTGGGCGGGCAAAAAATCGTATCCCAAGCGA TATCGATATCCAAACTCAAGATATCTATAATGCCGCGAGCAACGATGTTATTACTCAGCTTTATCAATCAACAGGCGACA TGAACCAATTGATGCGCAATGTAAAAGTAGAGCATCTTGCCACGACCGCTAATACCAGCAGGCGTGATAGTAGTGAGCTT GACGTCAATGCAGCCATTGCCAATACTTCACCCGTCAAAGGACGGCCAACCGATCAAGTCAAAGTAATGAAGGTGCAAGT AGACAACTATCATTTAAACGTCTATTTGCCAAATGAAAACAACTATCTTAAAAATGCCAATGAGAAAAATTCTGCGCTAG CAGACTTAGTGTCTACTTATGAGCTGCGCTTGTCGGGGCTAAACTCCATTAGCAAGCGACCGGGTTTAGGTATCAGTTTG GTGGCGTCATTGGACGATCGCTATACCACCACTATTCGTCAATTATTACTCTCTTCGCTCTCAGGTCAAATCGGTCAAGA AGCTGCTAATGGCAGACTTGGCAACAATAGCGCAAGCAACGCCGCAAAAATTACTCAAGAAGAAGATGCCAGCTCACGCA TTTATCCTACTGGGCATCTATTGATGACAGGACTGATTAAACCTACGGGCACTAGCGTACTCGACACCCTAAGTAGTGAG CAGCTAGATATCCATTTATATAACCCTTACCGCAGCGAGAGCGCCTCTATCTTAGGCGATGACTATCCACTGGCCGCCAA CTTCTCTGCCGGTTATGGACTCTGGTTAGCAGAAAATCAGCTCGATGGTGTCGGCTATCTAAACCTTATTACCCGTCAAA AAGAAGCCAGTTTACCCAAACTTTTTATGCTTGAGCCCTATGACCCTAATAAACGCGTGATTATCATGCTGCATGGTCTG GCATCAAGTCCGGCAACGTGGGTCAATTTGACCAACGATATTTTTAATGATGATAAATTACGTAATAACTATCAGGTATG GCAGATTTTTTATCCGACCAATCTGCCTATTTTAGAAAATCGCTATCAAATCCAAAAATTAATCACTGCCACTTATCAGC AAACAGACCCTGCAGGGGAAAATCTTGCCAGTAAGAACAGCGTGATTATTAGCCATAGCATGGGCGGTATCATTGCTCGC ATGATGTTATCTGATGATAATTTGGCGAATAATTTAGATGCATTGGACGATAATAGTTTATTAGCCAACAGCAGCCAGCG TCAGGTTGATGCCATGCTCAAGCAAGCCCTGACCAATAAGGAGCTGCGCAACCGTTTTGAATTAAATGCGCTACCGCAAG TTGATACGGCAGTATTTTTATCTTCCCCATTCCAAGGTACTGACTATGCCGATCGCTGGTTTACCCGTGCGTTACGCCGC ATTATTTATCTGCCGGTAGGCTTAGTAAAAACCGTTACGGACAATTTGGCAACCATTGCTATCAAAGGCGACTTGGCGAA TAACCCTCTAGGGGCGTTATACCTGCAAAATGGTGCCAGTCAATTGAGCGACAAATCCTCCTTTATTCAATTAACCAAAG ACATTAGCATCAACAAACGTGTTACTTATCATTCGATTATTGCCAATAACGATGCTGATATCACAAGAGGTCTGGCAGCA ATGCAACCGGAAGGCGTCAAACTTGATTTGTCGCAAGCAGTCATAGAAGATGATGATAGCGTGATTGAGACTGTCGATAC CAGTAGCACCAGCAATGTAGAAAACTCAGATAATTTAAACGTTTCAGCTGCCGTAGTTGATGTAGGGACTGCAAAAGATG CGCCTGCTAAGACAGATACCTTGCCACCTGAAGCACTGGTCGCTGCTGTTATCGTCAATGAAGAAATTAGCCAAGCATTA ACTGAGCGTTTGTCAGATGGTATCGTCCCCTATACCAGTGCGCATCTTGATGGTGCAGCGTCTGAGACGGTTATCAATGG CGGCCATAGTATCCAAGAAAATCCACAAACCATTCTGACCTTGCGACGTATATTGCATAAACAATTACAGCAATAG
Upstream 100 bases:
>100_bases TGCTATTTTATAATACATGCCTGTCCATTATTCACTGGAATTACCTATGATTTTCGCTGACCCTGTCAATAATGCGCCGA CAGCTATTCATAAAAATAAG
Downstream 100 bases:
>100_bases CTTAAAGTAAATAACAGGTTGGTTATTTTCACAGTAGATTTTTTACAACAGATAGCAAAAAAATATTATTAAAAGATATT GTTTTATATTACTTTTCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 851; Mature: 850
Protein sequence:
>851_residues MPLAVLALLSAMAILPACSTVSVNRQASAKTISAQRGNIVTDNKLSSDTASLLLSAGLNEQACMQQFELCLTQLADSMLN RHYRPALAAFSELHYAKARQLATSKSCSNALARPPLDPYYANAPLDDAEAKAQQSKTEICLIDYQERLFDAIKSSYTYLF YDSLEHDFEGADEKVSGGRAKNRIPSDIDIQTQDIYNAASNDVITQLYQSTGDMNQLMRNVKVEHLATTANTSRRDSSEL DVNAAIANTSPVKGRPTDQVKVMKVQVDNYHLNVYLPNENNYLKNANEKNSALADLVSTYELRLSGLNSISKRPGLGISL VASLDDRYTTTIRQLLLSSLSGQIGQEAANGRLGNNSASNAAKITQEEDASSRIYPTGHLLMTGLIKPTGTSVLDTLSSE QLDIHLYNPYRSESASILGDDYPLAANFSAGYGLWLAENQLDGVGYLNLITRQKEASLPKLFMLEPYDPNKRVIIMLHGL ASSPATWVNLTNDIFNDDKLRNNYQVWQIFYPTNLPILENRYQIQKLITATYQQTDPAGENLASKNSVIISHSMGGIIAR MMLSDDNLANNLDALDDNSLLANSSQRQVDAMLKQALTNKELRNRFELNALPQVDTAVFLSSPFQGTDYADRWFTRALRR IIYLPVGLVKTVTDNLATIAIKGDLANNPLGALYLQNGASQLSDKSSFIQLTKDISINKRVTYHSIIANNDADITRGLAA MQPEGVKLDLSQAVIEDDDSVIETVDTSSTSNVENSDNLNVSAAVVDVGTAKDAPAKTDTLPPEALVAAVIVNEEISQAL TERLSDGIVPYTSAHLDGAASETVINGGHSIQENPQTILTLRRILHKQLQQ
Sequences:
>Translated_851_residues MPLAVLALLSAMAILPACSTVSVNRQASAKTISAQRGNIVTDNKLSSDTASLLLSAGLNEQACMQQFELCLTQLADSMLN RHYRPALAAFSELHYAKARQLATSKSCSNALARPPLDPYYANAPLDDAEAKAQQSKTEICLIDYQERLFDAIKSSYTYLF YDSLEHDFEGADEKVSGGRAKNRIPSDIDIQTQDIYNAASNDVITQLYQSTGDMNQLMRNVKVEHLATTANTSRRDSSEL DVNAAIANTSPVKGRPTDQVKVMKVQVDNYHLNVYLPNENNYLKNANEKNSALADLVSTYELRLSGLNSISKRPGLGISL VASLDDRYTTTIRQLLLSSLSGQIGQEAANGRLGNNSASNAAKITQEEDASSRIYPTGHLLMTGLIKPTGTSVLDTLSSE QLDIHLYNPYRSESASILGDDYPLAANFSAGYGLWLAENQLDGVGYLNLITRQKEASLPKLFMLEPYDPNKRVIIMLHGL ASSPATWVNLTNDIFNDDKLRNNYQVWQIFYPTNLPILENRYQIQKLITATYQQTDPAGENLASKNSVIISHSMGGIIAR MMLSDDNLANNLDALDDNSLLANSSQRQVDAMLKQALTNKELRNRFELNALPQVDTAVFLSSPFQGTDYADRWFTRALRR IIYLPVGLVKTVTDNLATIAIKGDLANNPLGALYLQNGASQLSDKSSFIQLTKDISINKRVTYHSIIANNDADITRGLAA MQPEGVKLDLSQAVIEDDDSVIETVDTSSTSNVENSDNLNVSAAVVDVGTAKDAPAKTDTLPPEALVAAVIVNEEISQAL TERLSDGIVPYTSAHLDGAASETVINGGHSIQENPQTILTLRRILHKQLQQ >Mature_850_residues PLAVLALLSAMAILPACSTVSVNRQASAKTISAQRGNIVTDNKLSSDTASLLLSAGLNEQACMQQFELCLTQLADSMLNR HYRPALAAFSELHYAKARQLATSKSCSNALARPPLDPYYANAPLDDAEAKAQQSKTEICLIDYQERLFDAIKSSYTYLFY DSLEHDFEGADEKVSGGRAKNRIPSDIDIQTQDIYNAASNDVITQLYQSTGDMNQLMRNVKVEHLATTANTSRRDSSELD VNAAIANTSPVKGRPTDQVKVMKVQVDNYHLNVYLPNENNYLKNANEKNSALADLVSTYELRLSGLNSISKRPGLGISLV ASLDDRYTTTIRQLLLSSLSGQIGQEAANGRLGNNSASNAAKITQEEDASSRIYPTGHLLMTGLIKPTGTSVLDTLSSEQ LDIHLYNPYRSESASILGDDYPLAANFSAGYGLWLAENQLDGVGYLNLITRQKEASLPKLFMLEPYDPNKRVIIMLHGLA SSPATWVNLTNDIFNDDKLRNNYQVWQIFYPTNLPILENRYQIQKLITATYQQTDPAGENLASKNSVIISHSMGGIIARM MLSDDNLANNLDALDDNSLLANSSQRQVDAMLKQALTNKELRNRFELNALPQVDTAVFLSSPFQGTDYADRWFTRALRRI IYLPVGLVKTVTDNLATIAIKGDLANNPLGALYLQNGASQLSDKSSFIQLTKDISINKRVTYHSIIANNDADITRGLAAM QPEGVKLDLSQAVIEDDDSVIETVDTSSTSNVENSDNLNVSAAVVDVGTAKDAPAKTDTLPPEALVAAVIVNEEISQALT ERLSDGIVPYTSAHLDGAASETVINGGHSIQENPQTILTLRRILHKQLQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 93059; Mature: 92927
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLAVLALLSAMAILPACSTVSVNRQASAKTISAQRGNIVTDNKLSSDTASLLLSAGLNE CCHHHHHHHHHHHHHCCCCEEECCCCCCHHEECCCCCCEEECCCCCHHHHHHHHHCCCCH QACMQQFELCLTQLADSMLNRHYRPALAAFSELHYAKARQLATSKSCSNALARPPLDPYY HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC ANAPLDDAEAKAQQSKTEICLIDYQERLFDAIKSSYTYLFYDSLEHDFEGADEKVSGGRA CCCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCC KNRIPSDIDIQTQDIYNAASNDVITQLYQSTGDMNQLMRNVKVEHLATTANTSRRDSSEL CCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHEECCCCCCCCCCCC DVNAAIANTSPVKGRPTDQVKVMKVQVDNYHLNVYLPNENNYLKNANEKNSALADLVSTY CEEEEECCCCCCCCCCCCCEEEEEEEECCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHH ELRLSGLNSISKRPGLGISLVASLDDRYTTTIRQLLLSSLSGQIGQEAANGRLGNNSASN HHHHHCCHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCC AAKITQEEDASSRIYPTGHLLMTGLIKPTGTSVLDTLSSEQLDIHLYNPYRSESASILGD CHHCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCC DYPLAANFSAGYGLWLAENQLDGVGYLNLITRQKEASLPKLFMLEPYDPNKRVIIMLHGL CCCEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEECC ASSPATWVNLTNDIFNDDKLRNNYQVWQIFYPTNLPILENRYQIQKLITATYQQTDPAGE CCCCCEEEECCHHHCCCCHHCCCEEEEEEEECCCCCHHCCHHHHHHHHHHHHHCCCCCCC NLASKNSVIISHSMGGIIARMMLSDDNLANNLDALDDNSLLANSSQRQVDAMLKQALTNK CCCCCCCEEEEECHHHHHHHHHHCCCCHHCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHH ELRNRFELNALPQVDTAVFLSSPFQGTDYADRWFTRALRRIIYLPVGLVKTVTDNLATIA HHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHCCCEEEEE IKGDLANNPLGALYLQNGASQLSDKSSFIQLTKDISINKRVTYHSIIANNDADITRGLAA EECCCCCCCCEEEEECCCHHHHCCCHHHHEECCCCCCCCEEEEEEEEECCCCHHHHHHHH MQPEGVKLDLSQAVIEDDDSVIETVDTSSTSNVENSDNLNVSAAVVDVGTAKDAPAKTDT CCCCCCEEEHHHHHHCCCCHHHHEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCC LPPEALVAAVIVNEEISQALTERLSDGIVPYTSAHLDGAASETVINGGHSIQENPQTILT CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHH LRRILHKQLQQ HHHHHHHHHCC >Mature Secondary Structure PLAVLALLSAMAILPACSTVSVNRQASAKTISAQRGNIVTDNKLSSDTASLLLSAGLNE CHHHHHHHHHHHHHCCCCEEECCCCCCHHEECCCCCCEEECCCCCHHHHHHHHHCCCCH QACMQQFELCLTQLADSMLNRHYRPALAAFSELHYAKARQLATSKSCSNALARPPLDPYY HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC ANAPLDDAEAKAQQSKTEICLIDYQERLFDAIKSSYTYLFYDSLEHDFEGADEKVSGGRA CCCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCC KNRIPSDIDIQTQDIYNAASNDVITQLYQSTGDMNQLMRNVKVEHLATTANTSRRDSSEL CCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHEECCCCCCCCCCCC DVNAAIANTSPVKGRPTDQVKVMKVQVDNYHLNVYLPNENNYLKNANEKNSALADLVSTY CEEEEECCCCCCCCCCCCCEEEEEEEECCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHH ELRLSGLNSISKRPGLGISLVASLDDRYTTTIRQLLLSSLSGQIGQEAANGRLGNNSASN HHHHHCCHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCC AAKITQEEDASSRIYPTGHLLMTGLIKPTGTSVLDTLSSEQLDIHLYNPYRSESASILGD CHHCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCC DYPLAANFSAGYGLWLAENQLDGVGYLNLITRQKEASLPKLFMLEPYDPNKRVIIMLHGL CCCEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEECC ASSPATWVNLTNDIFNDDKLRNNYQVWQIFYPTNLPILENRYQIQKLITATYQQTDPAGE CCCCCEEEECCHHHCCCCHHCCCEEEEEEEECCCCCHHCCHHHHHHHHHHHHHCCCCCCC NLASKNSVIISHSMGGIIARMMLSDDNLANNLDALDDNSLLANSSQRQVDAMLKQALTNK CCCCCCCEEEEECHHHHHHHHHHCCCCHHCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHH ELRNRFELNALPQVDTAVFLSSPFQGTDYADRWFTRALRRIIYLPVGLVKTVTDNLATIA HHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHCCCEEEEE IKGDLANNPLGALYLQNGASQLSDKSSFIQLTKDISINKRVTYHSIIANNDADITRGLAA EECCCCCCCCEEEEECCCHHHHCCCHHHHEECCCCCCCCEEEEEEEEECCCCHHHHHHHH MQPEGVKLDLSQAVIEDDDSVIETVDTSSTSNVENSDNLNVSAAVVDVGTAKDAPAKTDT CCCCCCEEEHHHHHHCCCCHHHHEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCC LPPEALVAAVIVNEEISQALTERLSDGIVPYTSAHLDGAASETVINGGHSIQENPQTILT CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHH LRRILHKQLQQ HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA