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The map label for this gene is iscR [H]

Identifier: 93006479

GI number: 93006479

Start: 2039623

End: 2040135

Strand: Direct

Name: iscR [H]

Synonym: Pcryo_1655

Alternate gene names: 93006479

Gene position: 2039623-2040135 (Clockwise)

Preceding gene: 93006478

Following gene: 93006480

Centisome position: 66.66

GC content: 43.86

Gene sequence:

>513_bases
ATGCGTTTAACTACTCGAGGCAGATATGCCGTGACCGCTTTGCTAGATTTGGCATTACAAACCAGCCAACAAGAAAGCGC
GGTGTCTTTATCCGATATTGCCAAGCGACAATCCATTTCTATATCCTACCTCGAGCAGTTATTCTCAAAACTTCGTAAGC
GTGGTTTGGTCACTAGTATTCGCGGCGCAGCAGGTGGCTATTATTTAGCAAAGCCACTTGATCAGATTGATGTGATGAGT
ATCATCTCTGCTGTCGATGAATCGGTCAATGCCATGCAGTGTGAAGGACGCGGCGACTGCCAAGGTGGTACAATGTGTCT
GACCCATGATTTGTGGTGTGCATTATCAAATCATGTAGAGCAGTACTTGAAAAATATAACATTAGCGCAATTATTAAACA
TGGAGCACGTGCAGTCTGTATCAGATCGGCAGCACAGCGATGCTCTAAAAGATATTTCTATAAAAGACATTAACACTATT
ACTTTATCGACCAGCGAGGCAAACCCAGCATGA

Upstream 100 bases:

>100_bases
AGCATAGCTATTTATATGTGACTGGCTATCTCTTAACCATCTGACCGATACTAAGATCGTTGTTAAATAAAATTATCCTT
AAAAAGTTTGGAGATAACAC

Downstream 100 bases:

>100_bases
GCCAACATAACACCCTTATATATTTAGATTATGCCGCCACGACGCCAGTTGCTAAGTCAGTCGCTGCCAAGATGAGCGAA
TATCTGACGGTAGATGGCAT

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MRLTTRGRYAVTALLDLALQTSQQESAVSLSDIAKRQSISISYLEQLFSKLRKRGLVTSIRGAAGGYYLAKPLDQIDVMS
IISAVDESVNAMQCEGRGDCQGGTMCLTHDLWCALSNHVEQYLKNITLAQLLNMEHVQSVSDRQHSDALKDISIKDINTI
TLSTSEANPA

Sequences:

>Translated_170_residues
MRLTTRGRYAVTALLDLALQTSQQESAVSLSDIAKRQSISISYLEQLFSKLRKRGLVTSIRGAAGGYYLAKPLDQIDVMS
IISAVDESVNAMQCEGRGDCQGGTMCLTHDLWCALSNHVEQYLKNITLAQLLNMEHVQSVSDRQHSDALKDISIKDINTI
TLSTSEANPA
>Mature_170_residues
MRLTTRGRYAVTALLDLALQTSQQESAVSLSDIAKRQSISISYLEQLFSKLRKRGLVTSIRGAAGGYYLAKPLDQIDVMS
IISAVDESVNAMQCEGRGDCQGGTMCLTHDLWCALSNHVEQYLKNITLAQLLNMEHVQSVSDRQHSDALKDISIKDINTI
TLSTSEANPA

Specific function: Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins [H]

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788880, Length=146, Percent_Identity=57.5342465753425, Blast_Score=149, Evalue=8e-38,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010242
- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 18646; Mature: 18646

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTTRGRYAVTALLDLALQTSQQESAVSLSDIAKRQSISISYLEQLFSKLRKRGLVTSI
CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHH
RGAAGGYYLAKPLDQIDVMSIISAVDESVNAMQCEGRGDCQGGTMCLTHDLWCALSNHVE
CCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCEEHHHHHHHHHHHHHH
QYLKNITLAQLLNMEHVQSVSDRQHSDALKDISIKDINTITLSTSEANPA
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MRLTTRGRYAVTALLDLALQTSQQESAVSLSDIAKRQSISISYLEQLFSKLRKRGLVTSI
CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHH
RGAAGGYYLAKPLDQIDVMSIISAVDESVNAMQCEGRGDCQGGTMCLTHDLWCALSNHVE
CCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCEEHHHHHHHHHHHHHH
QYLKNITLAQLLNMEHVQSVSDRQHSDALKDISIKDINTITLSTSEANPA
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA