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The map label for this gene is sspB [H]

Identifier: 93006411

GI number: 93006411

Start: 1946114

End: 1946557

Strand: Direct

Name: sspB [H]

Synonym: Pcryo_1587

Alternate gene names: 93006411

Gene position: 1946114-1946557 (Clockwise)

Preceding gene: 93006410

Following gene: 93006419

Centisome position: 63.6

GC content: 42.34

Gene sequence:

>444_bases
ATGAGCGAAGAAACCACATCTATTACTCCAACACGTCCTTATATGATACGTGCCTTGTATCAATGGATAGAAGACAATGA
GCTTACGCCGTATCTGATGGTCGATGCAACCGCCGATAATGTTCAAATTCCAAAAGAGCATGTGCAAGATGGTCGTATCG
TGCTCAATATTGCCAGCCGTGCCACCGGTAATATGAGTATGGAGAATGACTATATCCACTTTAGTGCGCGATTTGGCGGT
GTATCACAAGAGATCTGGGTACCGCTCACAGCAGTGCTAGGTATTTATGCAAAAGAGAATTCTCAAGGGATGTTTTTTGA
CCCCAATGAATATGACAATTATGTGCCTGAAGACGATGCCGTTGCGAGTAGCAGCTCTAAAACAAACGTAACAGCTCCTA
AGCCCAAACGTCATAATAAAGCTGGTTTAAAAGTATTAAAATAA

Upstream 100 bases:

>100_bases
AAATAACAAATAATGAAGCGCAAATGAATTTCTGCAAATAATCTTTTGCCGCTGATACCTTTTAACCCTTACTTAATACC
GTCAATATAGGAAGCCAAAG

Downstream 100 bases:

>100_bases
CAAAATATATCGCATAAAAAAGCTGAGCATATTAAATATGTTCAGCTTTTTTTGTTGTCAGCCCAAAAGTGATTATAACC
TTAAACGATTAGGTTCTTGG

Product: ClpXP protease specificity-enhancing factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MSEETTSITPTRPYMIRALYQWIEDNELTPYLMVDATADNVQIPKEHVQDGRIVLNIASRATGNMSMENDYIHFSARFGG
VSQEIWVPLTAVLGIYAKENSQGMFFDPNEYDNYVPEDDAVASSSSKTNVTAPKPKRHNKAGLKVLK

Sequences:

>Translated_147_residues
MSEETTSITPTRPYMIRALYQWIEDNELTPYLMVDATADNVQIPKEHVQDGRIVLNIASRATGNMSMENDYIHFSARFGG
VSQEIWVPLTAVLGIYAKENSQGMFFDPNEYDNYVPEDDAVASSSSKTNVTAPKPKRHNKAGLKVLK
>Mature_146_residues
SEETTSITPTRPYMIRALYQWIEDNELTPYLMVDATADNVQIPKEHVQDGRIVLNIASRATGNMSMENDYIHFSARFGGV
SQEIWVPLTAVLGIYAKENSQGMFFDPNEYDNYVPEDDAVASSSSKTNVTAPKPKRHNKAGLKVLK

Specific function: Seems to act in concert with sspA in the regulation of several proteins during exponential and stationary-phase growth. The exact function of sspB is not yet known [H]

COG id: COG2969

COG function: function code R; Stringent starvation protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789623, Length=105, Percent_Identity=53.3333333333333, Blast_Score=135, Evalue=9e-34,

Paralogues:

None

Copy number: 297 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007481 [H]

Pfam domain/function: PF04386 SspB [H]

EC number: NA

Molecular weight: Translated: 16501; Mature: 16370

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEETTSITPTRPYMIRALYQWIEDNELTPYLMVDATADNVQIPKEHVQDGRIVLNIASR
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHCCCCEEEEEECCC
ATGNMSMENDYIHFSARFGGVSQEIWVPLTAVLGIYAKENSQGMFFDPNEYDNYVPEDDA
CCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHEEEECCCCCCCEECCCCCCCCCCCCCC
VASSSSKTNVTAPKPKRHNKAGLKVLK
CCCCCCCCCCCCCCCCCCCCCCCEECC
>Mature Secondary Structure 
SEETTSITPTRPYMIRALYQWIEDNELTPYLMVDATADNVQIPKEHVQDGRIVLNIASR
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHCCCCEEEEEECCC
ATGNMSMENDYIHFSARFGGVSQEIWVPLTAVLGIYAKENSQGMFFDPNEYDNYVPEDDA
CCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHEEEECCCCCCCEECCCCCCCCCCCCCC
VASSSSKTNVTAPKPKRHNKAGLKVLK
CCCCCCCCCCCCCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]