Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is bcsP31 [H]
Identifier: 93005571
GI number: 93005571
Start: 871458
End: 872504
Strand: Direct
Name: bcsP31 [H]
Synonym: Pcryo_0741
Alternate gene names: 93005571
Gene position: 871458-872504 (Clockwise)
Preceding gene: 93005569
Following gene: 93005572
Centisome position: 28.48
GC content: 43.36
Gene sequence:
>1047_bases ATGAAGTCCATTTATAAACTGCCTTTACTTGCGGCAATGATTGCAGCCAGTATGACAATGGTTGCCTGTTCAGACAAAGC GCCTGCTGATAGCGCAGCTACTGACGGCGCTACTGCTGACAGTGCTACTGCTGATACCACCACAGATACTGCTGCCACAG CAAATGACAAGCTTGAAACCAAATTTGTCACCATTGCTACAGGAGGCGCCTCCGGTCCTTACAATATTATTGGAACGTCT TTAGCAGAGATTTATGCCAAGACTTTTGGCGTTAATGCTAAGACCCAAACGACAGGGGCGTCAGTAGAAAACGTCAATCT ATTGACCCAAGGTAAAGTAGATATGGTGCTGGCACTTAGTGATGTCGTCACTGATGCAGTCGAAGGTAAAAATGACTTTA AGGCACCTATCGCCAATATTCAGCAAATTGCTGTTCTGTATCCCAACGTCATTCAGCTGGTTGCTTCAGAGAAATCTGGT ATCAAAAACATTGAAGATTTAAAAGGCAAACGTATTGCGGTTGGCGATCAAGGCTCTGGTACTGAAGTGAATGCTCGAAC CTTGTTAGAAGGTTTTGGTATTACCTATGATGATGTCAAGGTAGATTATTTAGGCTTTGCAGATGCTGCAGATGCGATGA AAGCTGGCAAAATTGAAGCGGCATTTTTTAGCAGTGGCTTACCAAACTCTTCATTATTAGAGCTAGAGCAAGGTATCAAG TTGCAGTTGGTGACCATCAATCAAGATAAGCTGAAAAAAATTATTGAGACCAAGCCTTACTTTAAGACTTTTGAGATTCC TGCCGGTACCTATGGTAATGCTGCTGCTATTCCAACCACAGCCGTCATGAATGCCTTGTTAGTACGCTCTGATATCTCGG AAGATGATGGCTATAAGCTGACAAAAGCGTTGTTTGAAAACTTGGATGGGCTAAAGAATGCTCACCAAGCGGCGAGCGAT ATCAGTTTAGAGACGGCTCAAGTCGGTATGGTTGCTCCTATTCATCCTGGTGCCAAAAAATACTATGATGAGAAAGCAGC TAAATAA
Upstream 100 bases:
>100_bases AAAGTAGCACGTTGCTAGTGTGACAGATATGGATAGTACCATCATATCTGAGTCATACTTTTTTAAGTCCATTTGCTTTA TTTTATCAAGGAAGAAAATA
Downstream 100 bases:
>100_bases GCAAGTATGGTGGTTTGCTGGCGTAGCATCTATTGCTGCGCTGGTTTTATTTATACTATGGGCGATTTTTAGCCGCCAAA CAGTCATTGAAATACGAGTA
Product: TRAP transporter solute receptor TAXI family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MKSIYKLPLLAAMIAASMTMVACSDKAPADSAATDGATADSATADTTTDTAATANDKLETKFVTIATGGASGPYNIIGTS LAEIYAKTFGVNAKTQTTGASVENVNLLTQGKVDMVLALSDVVTDAVEGKNDFKAPIANIQQIAVLYPNVIQLVASEKSG IKNIEDLKGKRIAVGDQGSGTEVNARTLLEGFGITYDDVKVDYLGFADAADAMKAGKIEAAFFSSGLPNSSLLELEQGIK LQLVTINQDKLKKIIETKPYFKTFEIPAGTYGNAAAIPTTAVMNALLVRSDISEDDGYKLTKALFENLDGLKNAHQAASD ISLETAQVGMVAPIHPGAKKYYDEKAAK
Sequences:
>Translated_348_residues MKSIYKLPLLAAMIAASMTMVACSDKAPADSAATDGATADSATADTTTDTAATANDKLETKFVTIATGGASGPYNIIGTS LAEIYAKTFGVNAKTQTTGASVENVNLLTQGKVDMVLALSDVVTDAVEGKNDFKAPIANIQQIAVLYPNVIQLVASEKSG IKNIEDLKGKRIAVGDQGSGTEVNARTLLEGFGITYDDVKVDYLGFADAADAMKAGKIEAAFFSSGLPNSSLLELEQGIK LQLVTINQDKLKKIIETKPYFKTFEIPAGTYGNAAAIPTTAVMNALLVRSDISEDDGYKLTKALFENLDGLKNAHQAASD ISLETAQVGMVAPIHPGAKKYYDEKAAK >Mature_348_residues MKSIYKLPLLAAMIAASMTMVACSDKAPADSAATDGATADSATADTTTDTAATANDKLETKFVTIATGGASGPYNIIGTS LAEIYAKTFGVNAKTQTTGASVENVNLLTQGKVDMVLALSDVVTDAVEGKNDFKAPIANIQQIAVLYPNVIQLVASEKSG IKNIEDLKGKRIAVGDQGSGTEVNARTLLEGFGITYDDVKVDYLGFADAADAMKAGKIEAAFFSSGLPNSSLLELEQGIK LQLVTINQDKLKKIIETKPYFKTFEIPAGTYGNAAAIPTTAVMNALLVRSDISEDDGYKLTKALFENLDGLKNAHQAASD ISLETAQVGMVAPIHPGAKKYYDEKAAK
Specific function: Unknown
COG id: COG2358
COG function: function code R; TRAP-type uncharacterized transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015168 - InterPro: IPR011852 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 36534; Mature: 36534
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSIYKLPLLAAMIAASMTMVACSDKAPADSAATDGATADSATADTTTDTAATANDKLET CCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE KFVTIATGGASGPYNIIGTSLAEIYAKTFGVNAKTQTTGASVENVNLLTQGKVDMVLALS EEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCEEEEHHH DVVTDAVEGKNDFKAPIANIQQIAVLYPNVIQLVASEKSGIKNIEDLKGKRIAVGDQGSG HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCEEEECCCCCC TEVNARTLLEGFGITYDDVKVDYLGFADAADAMKAGKIEAAFFSSGLPNSSLLELEQGIK CCCHHHHHHHHCCCEECCEEEEEECCCCHHHHHHCCCEEEHHHHCCCCCCHHHHHHCCCE LQLVTINQDKLKKIIETKPYFKTFEIPAGTYGNAAAIPTTAVMNALLVRSDISEDDGYKL EEEEEECHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHH TKALFENLDGLKNAHQAASDISLETAQVGMVAPIHPGAKKYYDEKAAK HHHHHHHHHHHHHHHHHHHHCCEEHHHCCEEECCCCCHHHHHHHHCCC >Mature Secondary Structure MKSIYKLPLLAAMIAASMTMVACSDKAPADSAATDGATADSATADTTTDTAATANDKLET CCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE KFVTIATGGASGPYNIIGTSLAEIYAKTFGVNAKTQTTGASVENVNLLTQGKVDMVLALS EEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCEEEEHHH DVVTDAVEGKNDFKAPIANIQQIAVLYPNVIQLVASEKSGIKNIEDLKGKRIAVGDQGSG HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCEEEECCCCCC TEVNARTLLEGFGITYDDVKVDYLGFADAADAMKAGKIEAAFFSSGLPNSSLLELEQGIK CCCHHHHHHHHCCCEECCEEEEEECCCCHHHHHHCCCEEEHHHHCCCCCCHHHHHHCCCE LQLVTINQDKLKKIIETKPYFKTFEIPAGTYGNAAAIPTTAVMNALLVRSDISEDDGYKL EEEEEECHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHH TKALFENLDGLKNAHQAASDISLETAQVGMVAPIHPGAKKYYDEKAAK HHHHHHHHHHHHHHHHHHHHCCEEHHHCCEEECCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3133283 [H]