Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is 93005496
Identifier: 93005496
GI number: 93005496
Start: 789631
End: 790386
Strand: Direct
Name: 93005496
Synonym: Pcryo_0666
Alternate gene names: NA
Gene position: 789631-790386 (Clockwise)
Preceding gene: 93005495
Following gene: 93005497
Centisome position: 25.81
GC content: 38.36
Gene sequence:
>756_bases ATGGCAAAATTTTTAAACAGCAGTGGCACGACTTATCATTTAGAAGAGTTGATTAAAAATGCGTCTGATAGATTGATTAT TATTAGCCCCTATCTAAAGCTGAATGAGCGTATTAAAGAGTTGCTAGAAGATCGTAATCGTCTCAAAATTGATATTAGAA TCGTTTATGGCAAGAATGATTTGCACCCAGAAGAAATAAACTGGCTCAAAAATCTGACTTTTATTCGCACCAGCTTTTGT AAAAACTTGCATGCAAAGTGTTACCTGAACGAAAATGAGTGCATTATTACGAGCTTAAACCTTTATGAATTCAGCCAAGT CAATAATAATGAAATGGGCGTACTGATTTACCGTAATGAAGATGCGAAACTCTATGCCGATACTTATGAAGAAGCCCAGC GCATTATTCGTATCAGTGATGAAGTCAGAATGTCACTTGAGAAAATAATTGAGCCTAGTAATAGTGTTGATAACAACCTT AGTTCTGAGAGTGCTTCTCGAGTCCCTACTGAAACTCATTCTGCTAAACCTACAGAAGTAGCAACACCTAATTATTCTAA GTTAACGACGGCAAAGCTTGCCAAAGAGCTGGGCTTTAAAACCCAAGAATTAAACGATAAATTACTGACAGCGGGGTATT TGCAAGAGCAAGAAGGTGAGTTGTTATTAACAGATGCTGGGCGTGCCGCAGGTGGTACGAGTAAGCGTGGAAAGTTTGGT GAGTTTTGTCTGTGGGATTCAGGGATGGTGATATAA
Upstream 100 bases:
>100_bases AACAATAGTGGTTTGCAATGTTGCCCATTTCTAGTACGCTAGGGATGGGCTTTTTTGTGAATAAGTATAAATTTTAATCG TAGATGGTGAGGGTATTAAA
Downstream 100 bases:
>100_bases ACGTCTATTTAACTTCTCACTTTTTACCTCATTACTTTGTTTTCAAAGAATAATTTTGCTACCTTCGTGTTAGTAATAAA AGGAATAACCGCATTACAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MAKFLNSSGTTYHLEELIKNASDRLIIISPYLKLNERIKELLEDRNRLKIDIRIVYGKNDLHPEEINWLKNLTFIRTSFC KNLHAKCYLNENECIITSLNLYEFSQVNNNEMGVLIYRNEDAKLYADTYEEAQRIIRISDEVRMSLEKIIEPSNSVDNNL SSESASRVPTETHSAKPTEVATPNYSKLTTAKLAKELGFKTQELNDKLLTAGYLQEQEGELLLTDAGRAAGGTSKRGKFG EFCLWDSGMVI
Sequences:
>Translated_251_residues MAKFLNSSGTTYHLEELIKNASDRLIIISPYLKLNERIKELLEDRNRLKIDIRIVYGKNDLHPEEINWLKNLTFIRTSFC KNLHAKCYLNENECIITSLNLYEFSQVNNNEMGVLIYRNEDAKLYADTYEEAQRIIRISDEVRMSLEKIIEPSNSVDNNL SSESASRVPTETHSAKPTEVATPNYSKLTTAKLAKELGFKTQELNDKLLTAGYLQEQEGELLLTDAGRAAGGTSKRGKFG EFCLWDSGMVI >Mature_250_residues AKFLNSSGTTYHLEELIKNASDRLIIISPYLKLNERIKELLEDRNRLKIDIRIVYGKNDLHPEEINWLKNLTFIRTSFCK NLHAKCYLNENECIITSLNLYEFSQVNNNEMGVLIYRNEDAKLYADTYEEAQRIIRISDEVRMSLEKIIEPSNSVDNNLS SESASRVPTETHSAKPTEVATPNYSKLTTAKLAKELGFKTQELNDKLLTAGYLQEQEGELLLTDAGRAAGGTSKRGKFGE FCLWDSGMVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28607; Mature: 28476
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKFLNSSGTTYHLEELIKNASDRLIIISPYLKLNERIKELLEDRNRLKIDIRIVYGKND CCCCCCCCCCEEHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEEEEEECCCC LHPEEINWLKNLTFIRTSFCKNLHAKCYLNENECIITSLNLYEFSQVNNNEMGVLIYRNE CCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCEEECCCCCCCEEEEEEECC DAKLYADTYEEAQRIIRISDEVRMSLEKIIEPSNSVDNNLSSESASRVPTETHSAKPTEV CCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC ATPNYSKLTTAKLAKELGFKTQELNDKLLTAGYLQEQEGELLLTDAGRAAGGTSKRGKFG CCCCCHHHHHHHHHHHHCCCHHHHCCHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCC EFCLWDSGMVI CEEEECCCCCC >Mature Secondary Structure AKFLNSSGTTYHLEELIKNASDRLIIISPYLKLNERIKELLEDRNRLKIDIRIVYGKND CCCCCCCCCEEHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEEEEEECCCC LHPEEINWLKNLTFIRTSFCKNLHAKCYLNENECIITSLNLYEFSQVNNNEMGVLIYRNE CCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCEEECCCCCCCEEEEEEECC DAKLYADTYEEAQRIIRISDEVRMSLEKIIEPSNSVDNNLSSESASRVPTETHSAKPTEV CCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC ATPNYSKLTTAKLAKELGFKTQELNDKLLTAGYLQEQEGELLLTDAGRAAGGTSKRGKFG CCCCCHHHHHHHHHHHHCCCHHHHCCHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCC EFCLWDSGMVI CEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA