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The map label for this gene is 93005418

Identifier: 93005418

GI number: 93005418

Start: 702281

End: 703252

Strand: Direct

Name: 93005418

Synonym: Pcryo_0588

Alternate gene names: NA

Gene position: 702281-703252 (Clockwise)

Preceding gene: 93005416

Following gene: 93005419

Centisome position: 22.95

GC content: 46.09

Gene sequence:

>972_bases
ATGATGGCGCCGGCATGGGCAATAGATATGGATATTAACACGTTTATTGATGATCGCCTTTATATTCATAAGCTGAGACT
GACTGCGGTGTATATTAAAGACTCACAAAGCTACCATTTTTCAGCGCAAGCACCAAAACGTGATATCAGCTTGCCGATGG
CGATTGTTATTGCCATTAGCGTGCATGCGTTGATTATTTTCGGTATCAGTTTTTCGATGGGGCAAGACCCTGCCGGATTG
ATGCAAGACGTTGCTAAAGCCCTAACGGATAATATGCAGCCAAATGAAGATGCTCAATTTATTGCCAATGCCTCGCAACA
AGGCGGCGGTACGGTAAAAGAGCAATTGCGTCAAGAAACGGACCAAAGCAGCCCGTTATCCGCTGAGCAAATGAGTGAGA
CGCAAGACGTGATTCGCTTGCAGCGGCAAGTACGCCAGCAGCATTATCAAGAAAGCTACCTGCGCACCACACTAAGCTGG
CGTCATGCAAGCGTAGAGTCTGATAATGACAGTAAGCAAGCGCAAGATGATATGAGAGTGCAAGAAGAGCGCCTACGTAA
GCAGATTGCTACCTTGGAGGCGCAACTGTCTCAGCGTCAGCAAACTTATGCTACCAAATCAAAAGTAGTGACCATGGACA
GTAACTCAACGACCCATGGCGCGGCGGCAGATTATATCAATACCTTTCGTGAGCATGTTGAGCGCGTTGGGAATTTGCAA
TATCCTGCTCAAGCAAGGGCACAAAGTATTACGGGCGAAGTGCGTTTAATGGTGATTATTGCTAACGACGGTAATATCAA
AGCCATCCGTTTGCTTGAGAGTTCAAATTCAACTATCTTAGATGAAGCGGCAAAACAATCAGTCAGGCAAGCCGCGCCAT
TTGGTAAATTTACCGCGGATATGAAAGACATTGTTGAGTTGCGTCTGATACGTACCTACCGTTATAGTGATATCGTAGAA
GTGACGTACTAG

Upstream 100 bases:

>100_bases
TTAGAGTATACCTCTCACTGTAAGCAATGATAAATTGTTGAGAAGTTACTGTGAATTTACGGTATACGGTTGTGCTAGCG
AGACAATTCTATGTCATGTT

Downstream 100 bases:

>100_bases
AAGCGTTAAAAGCAGTCCTGCATTTTCAACGTATTAACTAAAACAGTAAATAGATAACACCCAGATATAGAGTAAAGAGT
TTATATGGAATTTTTAGGTT

Product: TonB-like protein

Products: NA

Alternate protein names: NB Protein; NB-Like Protein; NB Family C-Terminal Domain Protein; NB C-Terminal; NB Domain-Containing Protein; NB-Like; NB-Related Transmembrane Protein; Nb Family Protein; NB Domain Protein; NB-Like Domain-Containing Protein; NB-Dependent Receptor; Periplasmic Protein nB Links Inner And Outer Membranes; Nb Protein

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MMAPAWAIDMDINTFIDDRLYIHKLRLTAVYIKDSQSYHFSAQAPKRDISLPMAIVIAISVHALIIFGISFSMGQDPAGL
MQDVAKALTDNMQPNEDAQFIANASQQGGGTVKEQLRQETDQSSPLSAEQMSETQDVIRLQRQVRQQHYQESYLRTTLSW
RHASVESDNDSKQAQDDMRVQEERLRKQIATLEAQLSQRQQTYATKSKVVTMDSNSTTHGAAADYINTFREHVERVGNLQ
YPAQARAQSITGEVRLMVIIANDGNIKAIRLLESSNSTILDEAAKQSVRQAAPFGKFTADMKDIVELRLIRTYRYSDIVE
VTY

Sequences:

>Translated_323_residues
MMAPAWAIDMDINTFIDDRLYIHKLRLTAVYIKDSQSYHFSAQAPKRDISLPMAIVIAISVHALIIFGISFSMGQDPAGL
MQDVAKALTDNMQPNEDAQFIANASQQGGGTVKEQLRQETDQSSPLSAEQMSETQDVIRLQRQVRQQHYQESYLRTTLSW
RHASVESDNDSKQAQDDMRVQEERLRKQIATLEAQLSQRQQTYATKSKVVTMDSNSTTHGAAADYINTFREHVERVGNLQ
YPAQARAQSITGEVRLMVIIANDGNIKAIRLLESSNSTILDEAAKQSVRQAAPFGKFTADMKDIVELRLIRTYRYSDIVE
VTY
>Mature_323_residues
MMAPAWAIDMDINTFIDDRLYIHKLRLTAVYIKDSQSYHFSAQAPKRDISLPMAIVIAISVHALIIFGISFSMGQDPAGL
MQDVAKALTDNMQPNEDAQFIANASQQGGGTVKEQLRQETDQSSPLSAEQMSETQDVIRLQRQVRQQHYQESYLRTTLSW
RHASVESDNDSKQAQDDMRVQEERLRKQIATLEAQLSQRQQTYATKSKVVTMDSNSTTHGAAADYINTFREHVERVGNLQ
YPAQARAQSITGEVRLMVIIANDGNIKAIRLLESSNSTILDEAAKQSVRQAAPFGKFTADMKDIVELRLIRTYRYSDIVE
VTY

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36466; Mature: 36466

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMAPAWAIDMDINTFIDDRLYIHKLRLTAVYIKDSQSYHFSAQAPKRDISLPMAIVIAIS
CCCCCEEEECCHHHHHCCHHHEEEEEEEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHH
VHALIIFGISFSMGQDPAGLMQDVAKALTDNMQPNEDAQFIANASQQGGGTVKEQLRQET
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHC
DQSSPLSAEQMSETQDVIRLQRQVRQQHYQESYLRTTLSWRHASVESDNDSKQAQDDMRV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
QEERLRKQIATLEAQLSQRQQTYATKSKVVTMDSNSTTHGAAADYINTFREHVERVGNLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCC
YPAQARAQSITGEVRLMVIIANDGNIKAIRLLESSNSTILDEAAKQSVRQAAPFGKFTAD
CCHHHHHHHCCCCEEEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHH
MKDIVELRLIRTYRYSDIVEVTY
HHHHHHHHHHHHHCCCCEEEECC
>Mature Secondary Structure
MMAPAWAIDMDINTFIDDRLYIHKLRLTAVYIKDSQSYHFSAQAPKRDISLPMAIVIAIS
CCCCCEEEECCHHHHHCCHHHEEEEEEEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHH
VHALIIFGISFSMGQDPAGLMQDVAKALTDNMQPNEDAQFIANASQQGGGTVKEQLRQET
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHC
DQSSPLSAEQMSETQDVIRLQRQVRQQHYQESYLRTTLSWRHASVESDNDSKQAQDDMRV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
QEERLRKQIATLEAQLSQRQQTYATKSKVVTMDSNSTTHGAAADYINTFREHVERVGNLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCC
YPAQARAQSITGEVRLMVIIANDGNIKAIRLLESSNSTILDEAAKQSVRQAAPFGKFTAD
CCHHHHHHHCCCCEEEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHH
MKDIVELRLIRTYRYSDIVEVTY
HHHHHHHHHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA