Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is 93005384
Identifier: 93005384
GI number: 93005384
Start: 657480
End: 658502
Strand: Direct
Name: 93005384
Synonym: Pcryo_0554
Alternate gene names: NA
Gene position: 657480-658502 (Clockwise)
Preceding gene: 93005383
Following gene: 93005385
Centisome position: 21.49
GC content: 33.82
Gene sequence:
>1023_bases ATGAGTATGATTGAAGTTAAAATACCTCAAAATTTATCTCTTACCAATGCGTTAAATTTCTGTAATCGCTTGTGGGATTT AGATGATTCAGATAAATATGCTTTTGATTTTGTTAACTTGGAGTTTATTGAACCATTTACAATGGCATATGTTGCTAATG AGTTGAAACGATTTAGACAAACTAAGATAGAAAGTGAATTTGTAGCCTTGAATCATCAACATAAAACATACGCTGCACAT ATGGGTTTTTTTAAAGCTTTTGGGCTTGATTGTGGAAATAAGCCTGGTCAGGCAGCTGGTAGTAGTACTTATCTGCCTTT AACTATACTTAATGTTGCTGAACTTAAAAAAGAAGCTGCTGATGCATATGATCATGTTGGAAATGTGATTGAATCTAAAT CAGAAGATATTGCGAAAATATTAACTCGTCAAGAAGAAGGTGATCTGGTTGATACTCTTACTTTTTCTATTAGAGAGATA ATTAGAAATATCGTTGAGCACTCTGATTCTAAAGTAATCGAATATTGCGCACAATATTGGCCAACTAAAAATATAGTTGA ATTAGCTATTCTAGATACTGGTAATGGAATTATGAAAGGGTTATCTACTAACCCCCATTTGATTATCAAAGACGAGAGGG ATGCTTTGCATTTAGCTATGTTACCAGGAGTATCTGGTAAAATGTATAAAGGTGTCAAAAAGCGAAGAGATGATGAGTGG CAAAACTCTGGATTTGGTCTTTATATGACAAGTAGGATTTGTAGAAATGGTGGCGATTTCTTTATAGTAAGCAATGATAA AAGTATCTTTTTGGATAGTAAGTCAAAGCGAGACATCGAATGTAATTATAGAGGAACAGCTTTAAGACTTCGTATAGATA CTAGTCGAATATCTACCTATAGCGATATGCTTGCCCAGTATCGTAAAGAAGGTTTTGAGGCTGCTAAAAGATTCTCCGGT AAAGATGCAGTTGAGCCATCCATTGCATCTACTATGTTAGCTAGAGATTTTAAAGAAAATTAA
Upstream 100 bases:
>100_bases GTTTTGTTCCGTGCCTTAGAACCTAATTAATTTAGATTGTTGAAACGTGTTATTGATGATAGATTTCAGGAATAATAAGT TATTAGGTCTTTTTCTAAGG
Downstream 100 bases:
>100_bases TAGGCTAATTGAGCGGAACTTTTACCGTATGCTTGGTTTTATCATTTTATAGTTGCTTAATAGAATATCAGGGTCTTAAT ATGAGTAAATTAATTAACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MSMIEVKIPQNLSLTNALNFCNRLWDLDDSDKYAFDFVNLEFIEPFTMAYVANELKRFRQTKIESEFVALNHQHKTYAAH MGFFKAFGLDCGNKPGQAAGSSTYLPLTILNVAELKKEAADAYDHVGNVIESKSEDIAKILTRQEEGDLVDTLTFSIREI IRNIVEHSDSKVIEYCAQYWPTKNIVELAILDTGNGIMKGLSTNPHLIIKDERDALHLAMLPGVSGKMYKGVKKRRDDEW QNSGFGLYMTSRICRNGGDFFIVSNDKSIFLDSKSKRDIECNYRGTALRLRIDTSRISTYSDMLAQYRKEGFEAAKRFSG KDAVEPSIASTMLARDFKEN
Sequences:
>Translated_340_residues MSMIEVKIPQNLSLTNALNFCNRLWDLDDSDKYAFDFVNLEFIEPFTMAYVANELKRFRQTKIESEFVALNHQHKTYAAH MGFFKAFGLDCGNKPGQAAGSSTYLPLTILNVAELKKEAADAYDHVGNVIESKSEDIAKILTRQEEGDLVDTLTFSIREI IRNIVEHSDSKVIEYCAQYWPTKNIVELAILDTGNGIMKGLSTNPHLIIKDERDALHLAMLPGVSGKMYKGVKKRRDDEW QNSGFGLYMTSRICRNGGDFFIVSNDKSIFLDSKSKRDIECNYRGTALRLRIDTSRISTYSDMLAQYRKEGFEAAKRFSG KDAVEPSIASTMLARDFKEN >Mature_339_residues SMIEVKIPQNLSLTNALNFCNRLWDLDDSDKYAFDFVNLEFIEPFTMAYVANELKRFRQTKIESEFVALNHQHKTYAAHM GFFKAFGLDCGNKPGQAAGSSTYLPLTILNVAELKKEAADAYDHVGNVIESKSEDIAKILTRQEEGDLVDTLTFSIREII RNIVEHSDSKVIEYCAQYWPTKNIVELAILDTGNGIMKGLSTNPHLIIKDERDALHLAMLPGVSGKMYKGVKKRRDDEWQ NSGFGLYMTSRICRNGGDFFIVSNDKSIFLDSKSKRDIECNYRGTALRLRIDTSRISTYSDMLAQYRKEGFEAAKRFSGK DAVEPSIASTMLARDFKEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38571; Mature: 38440
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMIEVKIPQNLSLTNALNFCNRLWDLDDSDKYAFDFVNLEFIEPFTMAYVANELKRFRQ CCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEEHCCHHHHHHHHHHHHHHHH TKIESEFVALNHQHKTYAAHMGFFKAFGLDCGNKPGQAAGSSTYLPLTILNVAELKKEAA HHHHHHHHEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHEEHHHHHHHHHHHH DAYDHVGNVIESKSEDIAKILTRQEEGDLVDTLTFSIREIIRNIVEHSDSKVIEYCAQYW HHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC PTKNIVELAILDTGNGIMKGLSTNPHLIIKDERDALHLAMLPGVSGKMYKGVKKRRDDEW CCCCEEEEEEEECCCHHHHCCCCCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHCCCCH QNSGFGLYMTSRICRNGGDFFIVSNDKSIFLDSKSKRDIECNYRGTALRLRIDTSRISTY HCCCCEEEEHHHHHHCCCCEEEEECCCEEEEECCCCCCEEECCCCEEEEEEEEHHHHHHH SDMLAQYRKEGFEAAKRFSGKDAVEPSIASTMLARDFKEN HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure SMIEVKIPQNLSLTNALNFCNRLWDLDDSDKYAFDFVNLEFIEPFTMAYVANELKRFRQ CEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEEHCCHHHHHHHHHHHHHHHH TKIESEFVALNHQHKTYAAHMGFFKAFGLDCGNKPGQAAGSSTYLPLTILNVAELKKEAA HHHHHHHHEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHEEHHHHHHHHHHHH DAYDHVGNVIESKSEDIAKILTRQEEGDLVDTLTFSIREIIRNIVEHSDSKVIEYCAQYW HHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC PTKNIVELAILDTGNGIMKGLSTNPHLIIKDERDALHLAMLPGVSGKMYKGVKKRRDDEW CCCCEEEEEEEECCCHHHHCCCCCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHCCCCH QNSGFGLYMTSRICRNGGDFFIVSNDKSIFLDSKSKRDIECNYRGTALRLRIDTSRISTY HCCCCEEEEHHHHHHCCCCEEEEECCCEEEEECCCCCCEEECCCCEEEEEEEEHHHHHHH SDMLAQYRKEGFEAAKRFSGKDAVEPSIASTMLARDFKEN HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA