Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is 93005368
Identifier: 93005368
GI number: 93005368
Start: 636335
End: 636817
Strand: Direct
Name: 93005368
Synonym: Pcryo_0538
Alternate gene names: NA
Gene position: 636335-636817 (Clockwise)
Preceding gene: 93005367
Following gene: 93005370
Centisome position: 20.8
GC content: 42.24
Gene sequence:
>483_bases ATGGCTACTAACCTTTCTCATAATGACAGTCAACAGCAAATATCCGAAACAAACAGTCAATCAACCCAGCTGTTAAAACC GATTATGCCTGTTCGTCAGCGCCTGATGGTGACATGGCTGGTTTGGCTAACCTTTCGATTGCTTGCTTTGCCTCTTTTGA TCAATATCTTTAATCCTAGTCACCCTGATATTATCGGCGGTATTGCATGGCAAGCGCTATGGTTAGTACCAGCATTTGTC TTAACACCATCGATACTACGCGGGCGCTCGCCTTATGCGCTATTAATAGACAGTATGTTTACTTTGGTATATTTAGGGGC AAGTGGGGTTGTATTGTTCACACGTGCTTATGGCAGTAGTTGGGCAGAAATCGCTGTTTATTTCATTGATTTCGTCCTGC TATTTGCGATTAATATCTGGCTGTTTATCTTATTAAAGCGCCTACCTTCGATGAATAATGTGGTTAAACAGCCACGCTCA TAA
Upstream 100 bases:
>100_bases TTGGCGATTACGGCATCTGCATTAGCGCAAGCTAACTGGAGCTGTTAATGCACTCATCTATTACTGTTTGGCATGAACAA TTAGGAAATACATACCTCTA
Downstream 100 bases:
>100_bases GTCATTGATATCTATTACAATGCTATTCCTCTGTAGTGCTTAATAAAAAATTTACATTAAAAAAGCGGCACGCTATTTAG CAGGCCGCTTTTTTAATGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MATNLSHNDSQQQISETNSQSTQLLKPIMPVRQRLMVTWLVWLTFRLLALPLLINIFNPSHPDIIGGIAWQALWLVPAFV LTPSILRGRSPYALLIDSMFTLVYLGASGVVLFTRAYGSSWAEIAVYFIDFVLLFAINIWLFILLKRLPSMNNVVKQPRS
Sequences:
>Translated_160_residues MATNLSHNDSQQQISETNSQSTQLLKPIMPVRQRLMVTWLVWLTFRLLALPLLINIFNPSHPDIIGGIAWQALWLVPAFV LTPSILRGRSPYALLIDSMFTLVYLGASGVVLFTRAYGSSWAEIAVYFIDFVLLFAINIWLFILLKRLPSMNNVVKQPRS >Mature_159_residues ATNLSHNDSQQQISETNSQSTQLLKPIMPVRQRLMVTWLVWLTFRLLALPLLINIFNPSHPDIIGGIAWQALWLVPAFVL TPSILRGRSPYALLIDSMFTLVYLGASGVVLFTRAYGSSWAEIAVYFIDFVLLFAINIWLFILLKRLPSMNNVVKQPRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18173; Mature: 18042
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATNLSHNDSQQQISETNSQSTQLLKPIMPVRQRLMVTWLVWLTFRLLALPLLINIFNPS CCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC HPDIIGGIAWQALWLVPAFVLTPSILRGRSPYALLIDSMFTLVYLGASGVVLFTRAYGSS CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEHHHHCCH WAEIAVYFIDFVLLFAINIWLFILLKRLPSMNNVVKQPRS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCC >Mature Secondary Structure ATNLSHNDSQQQISETNSQSTQLLKPIMPVRQRLMVTWLVWLTFRLLALPLLINIFNPS CCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC HPDIIGGIAWQALWLVPAFVLTPSILRGRSPYALLIDSMFTLVYLGASGVVLFTRAYGSS CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEHHHHCCH WAEIAVYFIDFVLLFAINIWLFILLKRLPSMNNVVKQPRS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA