Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is mreC [H]
Identifier: 93005309
GI number: 93005309
Start: 588214
End: 589074
Strand: Direct
Name: mreC [H]
Synonym: Pcryo_0479
Alternate gene names: 93005309
Gene position: 588214-589074 (Clockwise)
Preceding gene: 93005308
Following gene: 93005310
Centisome position: 19.22
GC content: 45.41
Gene sequence:
>861_bases ATGACTCCAAGTATTTTTGCTCGCCAGCCACTCGCGCTTCGTATGACTGCTGTTTTATTAATAGTGGCATTGATATTGAT GTGGTTTGATAGCAAAAATCCAGAATGGTTCAAGCCTATGCGCTCAACGAGCCACGCCGCAATGCAGCCTATTTACGAGC TGTCATTATTACCCAGTTATGCACAACACTGGTCAAGCGGCAGCCTACAATCAAAAGAAACGCTGCGCCGCGAAAACATG CAGCTCAGATCTCAACTTATTCACGCGCAAGCTAAATTGCAGCAGCAAGATTATATCTTGGCGCAAAACGCTCGCCTGCA AGGTATTCTATCGACCACACGCCCTGAACAATTTGATTTAAATTTGGCACAGGTAATTGGTACTGACACCAATCTACTGC GTCAAATTGTGGTGTTGAATAAAGGGGAGCAAGATGGGGTACAAGTTGGGCAAACGGTCATTGATGAAAACGGCATTTTA GGGCAGATTATCAATGTCTATCCTAATACCAGCCGTTTATTGCTTATTACTGATGAACAGCAGTCCGTTGCCGTTACTGT CAAGCGGACAGGGCAGCGCGCTATTGTCACCGGTCAGGGTATACCTACTTCATTGAGCCTTGAATATGTCTTTAAAACCT CAGATGTACGCGTCGGGGATGAGCTGGTCTCGTCTGGATTAGGTGGGCGTATCCCTGCAGGCTACCGTGTTGGTCGTATC GCCCATATTGAAGACACGCAAGCGGATAATTTTAGAAGCATTGATGTCACACCTGCCGCAAACTTTGTCGATAATGCTTA TGTGCTGATACTACAAGACAAGCTGGCTAATAAAAACAATATTGGCATTAATGAGTCTTGA
Upstream 100 bases:
>100_bases ACTGAGCTTTTTTTGATATCAACTGCCTTTTATATAGTGCTATATAGTGCTATATGGTGCTGGCTAATGCTCACATTAAA ACCTCTACATTAGACGAACT
Downstream 100 bases:
>100_bases TGGTCATTGTTAGAGATAATCATTGCCCGATAATCAGCCGCTATTCTATTTAAGTGCGCTGTTTTACTCCTCGTTTTTTA TTCCCTGCAATGCTGAATTC
Product: rod shape-determining protein MreC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MTPSIFARQPLALRMTAVLLIVALILMWFDSKNPEWFKPMRSTSHAAMQPIYELSLLPSYAQHWSSGSLQSKETLRRENM QLRSQLIHAQAKLQQQDYILAQNARLQGILSTTRPEQFDLNLAQVIGTDTNLLRQIVVLNKGEQDGVQVGQTVIDENGIL GQIINVYPNTSRLLLITDEQQSVAVTVKRTGQRAIVTGQGIPTSLSLEYVFKTSDVRVGDELVSSGLGGRIPAGYRVGRI AHIEDTQADNFRSIDVTPAANFVDNAYVLILQDKLANKNNIGINES
Sequences:
>Translated_286_residues MTPSIFARQPLALRMTAVLLIVALILMWFDSKNPEWFKPMRSTSHAAMQPIYELSLLPSYAQHWSSGSLQSKETLRRENM QLRSQLIHAQAKLQQQDYILAQNARLQGILSTTRPEQFDLNLAQVIGTDTNLLRQIVVLNKGEQDGVQVGQTVIDENGIL GQIINVYPNTSRLLLITDEQQSVAVTVKRTGQRAIVTGQGIPTSLSLEYVFKTSDVRVGDELVSSGLGGRIPAGYRVGRI AHIEDTQADNFRSIDVTPAANFVDNAYVLILQDKLANKNNIGINES >Mature_285_residues TPSIFARQPLALRMTAVLLIVALILMWFDSKNPEWFKPMRSTSHAAMQPIYELSLLPSYAQHWSSGSLQSKETLRRENMQ LRSQLIHAQAKLQQQDYILAQNARLQGILSTTRPEQFDLNLAQVIGTDTNLLRQIVVLNKGEQDGVQVGQTVIDENGILG QIINVYPNTSRLLLITDEQQSVAVTVKRTGQRAIVTGQGIPTSLSLEYVFKTSDVRVGDELVSSGLGGRIPAGYRVGRIA HIEDTQADNFRSIDVTPAANFVDNAYVLILQDKLANKNNIGINES
Specific function: Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins [H]
COG id: COG1792
COG function: function code M; Cell shape-determining protein
Gene ontology:
Cell location: Inner Membrane-Anchored [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mreC family [H]
Homologues:
Organism=Escherichia coli, GI1789648, Length=249, Percent_Identity=36.144578313253, Blast_Score=109, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007221 - InterPro: IPR005223 [H]
Pfam domain/function: PF04085 MreC [H]
EC number: NA
Molecular weight: Translated: 31739; Mature: 31608
Theoretical pI: Translated: 7.82; Mature: 7.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPSIFARQPLALRMTAVLLIVALILMWFDSKNPEWFKPMRSTSHAAMQPIYELSLLPSY CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHCHHH AQHWSSGSLQSKETLRRENMQLRSQLIHAQAKLQQQDYILAQNARLQGILSTTRPEQFDL HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCEEEEEHHCCCCCHHCC NLAQVIGTDTNLLRQIVVLNKGEQDGVQVGQTVIDENGILGQIINVYPNTSRLLLITDEQ HHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEHEEECCCCCEEEEEECCC QSVAVTVKRTGQRAIVTGQGIPTSLSLEYVFKTSDVRVGDELVSSGLGGRIPAGYRVGRI CEEEEEEEECCCEEEEECCCCCCEEEEEEEEECCCCEECHHHHHCCCCCCCCCCCEECEE AHIEDTQADNFRSIDVTPAANFVDNAYVLILQDKLANKNNIGINES EEECCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure TPSIFARQPLALRMTAVLLIVALILMWFDSKNPEWFKPMRSTSHAAMQPIYELSLLPSY CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHCHHH AQHWSSGSLQSKETLRRENMQLRSQLIHAQAKLQQQDYILAQNARLQGILSTTRPEQFDL HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCEEEEEHHCCCCCHHCC NLAQVIGTDTNLLRQIVVLNKGEQDGVQVGQTVIDENGILGQIINVYPNTSRLLLITDEQ HHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEHEEECCCCCEEEEEECCC QSVAVTVKRTGQRAIVTGQGIPTSLSLEYVFKTSDVRVGDELVSSGLGGRIPAGYRVGRI CEEEEEEEECCCEEEEECCCCCCEEEEEEEEECCCCEECHHHHHCCCCCCCCCCCEECEE AHIEDTQADNFRSIDVTPAANFVDNAYVLILQDKLANKNNIGINES EEECCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]