Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
---|---|
Accession | NC_007969 |
Length | 3,059,876 |
Click here to switch to the map view.
The map label for this gene is 93005302
Identifier: 93005302
GI number: 93005302
Start: 579688
End: 580218
Strand: Direct
Name: 93005302
Synonym: Pcryo_0472
Alternate gene names: NA
Gene position: 579688-580218 (Clockwise)
Preceding gene: 93005301
Following gene: 93005308
Centisome position: 18.94
GC content: 42.75
Gene sequence:
>531_bases ATGTCATTTGGCGCTATATTTTTAATATTGGCAGTTGGCTTTTTGGGGCTGATTACCTTACCAAAATTATTTTCTAATAA ACAAGCTGTTGAACCAGATCTGCCGCCTGTACGCGGTGATGAGTTGGCTATTTGGCCGTTTGCGCCGATGCCTATCATGA CCCCTACTGAAGTGATATTTTTTAATAAGTTAAAAAATGCATTACCGGAATATCATATTTTTGTGCAAGTACAGCTGTCA CGGATTATTGAAGCGAACAGTAATGAGACGTCTGAGCGCAGTTTTTGGTTCAATCGTATCTGCCGCCAAAGTGTTGATTA TGTGATTGTTGATATTGATGCGCAGACTACCTTGGTTGCCATCGAGCTTGATGATTGGACACATAGCAGTAAAGCAAGGC AAAAAGCCGATGACAAAAAAGACAAGGCGCTTGCCAGTGCGGGTATTGCTATCGTGCGTTTTCATGCGGAGCGCATGCCG AGTGCCGACATGCTGAGATATGAGCTGATGCAAGTGATTGAGAGTTATTAA
Upstream 100 bases:
>100_bases TAAGGGTCGACCTGCTGCAGTTAAAGGTAGTTTGTTATGTTAGCTAGGCTAGCATATAGGCAAGCTATCTAACTGCTTAG ATATTGCATAAGGTAAAACC
Downstream 100 bases:
>100_bases AAGCTATTAAGATGATGATAAAAGCTTAAAGTTTATTTTCTACTTGTTCGGTCTGCTTAGGATAAATAACAATAGGTCTA TCGCCTGCAAAATATAAACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MSFGAIFLILAVGFLGLITLPKLFSNKQAVEPDLPPVRGDELAIWPFAPMPIMTPTEVIFFNKLKNALPEYHIFVQVQLS RIIEANSNETSERSFWFNRICRQSVDYVIVDIDAQTTLVAIELDDWTHSSKARQKADDKKDKALASAGIAIVRFHAERMP SADMLRYELMQVIESY
Sequences:
>Translated_176_residues MSFGAIFLILAVGFLGLITLPKLFSNKQAVEPDLPPVRGDELAIWPFAPMPIMTPTEVIFFNKLKNALPEYHIFVQVQLS RIIEANSNETSERSFWFNRICRQSVDYVIVDIDAQTTLVAIELDDWTHSSKARQKADDKKDKALASAGIAIVRFHAERMP SADMLRYELMQVIESY >Mature_175_residues SFGAIFLILAVGFLGLITLPKLFSNKQAVEPDLPPVRGDELAIWPFAPMPIMTPTEVIFFNKLKNALPEYHIFVQVQLSR IIEANSNETSERSFWFNRICRQSVDYVIVDIDAQTTLVAIELDDWTHSSKARQKADDKKDKALASAGIAIVRFHAERMPS ADMLRYELMQVIESY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20005; Mature: 19874
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFGAIFLILAVGFLGLITLPKLFSNKQAVEPDLPPVRGDELAIWPFAPMPIMTPTEVIF CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHH FNKLKNALPEYHIFVQVQLSRIIEANSNETSERSFWFNRICRQSVDYVIVDIDAQTTLVA HHHHHHCCCCEEEEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCEEEEE IELDDWTHSSKARQKADDKKDKALASAGIAIVRFHAERMPSADMLRYELMQVIESY EEECCCCCCHHHHHHHCCHHHHHHHHCCHHEEEEEHHHCCCHHHHHHHHHHHHHCC >Mature Secondary Structure SFGAIFLILAVGFLGLITLPKLFSNKQAVEPDLPPVRGDELAIWPFAPMPIMTPTEVIF CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHH FNKLKNALPEYHIFVQVQLSRIIEANSNETSERSFWFNRICRQSVDYVIVDIDAQTTLVA HHHHHHCCCCEEEEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCEEEEE IELDDWTHSSKARQKADDKKDKALASAGIAIVRFHAERMPSADMLRYELMQVIESY EEECCCCCCHHHHHHHCCHHHHHHHHCCHHEEEEEHHHCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA