Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is folC [H]
Identifier: 93005300
GI number: 93005300
Start: 576586
End: 577959
Strand: Direct
Name: folC [H]
Synonym: Pcryo_0470
Alternate gene names: 93005300
Gene position: 576586-577959 (Clockwise)
Preceding gene: 93005299
Following gene: 93005301
Centisome position: 18.84
GC content: 45.71
Gene sequence:
>1374_bases ATGTCTGATTCTTTAGTGTCTCGTAGCCCCAGTAGTACCCCTGACAACCAAGCCACTTTAACCGAATGGCTGAATTATAT GCAGCAGATTCATGTCTCGGCGATAGATATGGGGCTGTCACGAGTACTGCCAGTTGCTGAGGCATTGGGAGTCGTACAAT CAGCCAAAGATGACGCCTATGTATTTACGGTTGCAGGTACTAATGGCAAAGGCTCGACGACTGCGGTCATCGCGCAGATG TGCCAAGCCGCAGGATATAAAACTGCCTTATATCAATCGCCGCACTTGAGCGTCTTTAACGAGCGGGTACGGATCGATGG CGAGATGGTCAGCGATGAAACCCTGATTGCTGCCTTTAGCAAGGTAGAAGCGGCACGGTTGCAATGTGATTTAACATTGT CATTTTTTGAGATGACAACACTGGCAGCATTGTTGATATTCGCGGAAGCGGATTGCGATGTTTGGGTGTTAGAAGTAGGG CTGGGCGGTCGCTTAGACGTGGTCAATATCATCGACCCTGATATGGCAGTGATTACCAATATTGCCATCGATCATGTTGA TTGGTTGGGTGATAATGTGGAAGCCATCGGAGCGGAAAAAGCAGGTATTTTACGTGATGGGATTAGCGTCATTTACGGTG CTACAGAGATGCCAAATAGCGTACAGCAAGCGATAGATAAGCATCAGGCGACTTGTTATCAAGTCAGTAAAGAGTTCAGC TATTGTGAAAATAATTCGACTAGGTGGCAATATAGCAATGCCGCTGTCACTCTACAATTGCCTCGACCCGCACTGTCATT GACCAATACTGCCAATGCTCTGTCAGCAGTACTTGCAAGTCCCTTAGACGTCGATACCAATGCTATAGAGCAAGCGCTAA AAACAGTTAAGCTTGCCGGTCGCTTCGATTATCGTGAAGTCCATGAGCGTCATTGGCTATTTGATGTGGCGCATAATGAT CAAGGCGTTGAGTTTTTATTGGCACAGTTAGTGCCGCTTTGGCAGCAGCATTTAACACAGCAAAGTACATCTGAACAAGT TAATCAAACTTCAGGTGAACCTGCTACCATTAAAATGTTGTTTTCTATGCTAGGTGATAAAGATATTAATAAAGTGGTGC AGCGTTTGACGACAGCAGGCTTACCAATCAGTGATTGGTTCATCGCTGAAATTGATTATCCACGTGCTGCCACTACGGAG CATTTGCAAGGTATCTTAGCGAGCTATGTCGATGATTCTCAGATACATGAGTTTGCGCGTTTGCAAGAAGCCACTCATGC GATTATAAATGCCAGTCAGCCACAAGATTTAATCGTAGTCTGTGGCTCTTTTCATACGATTGGAGAGGCATTGTCTACGC TTGAAACGCGATAA
Upstream 100 bases:
>100_bases GGTAAATGCTATTTTTGCTTTGTAGCAAGCTAGTCATACTGTTTTTATTTTTTTATATAAGTTTTATCTTTTATCTCAAA CTTTGATATAGGTTCTGTCC
Downstream 100 bases:
>100_bases TTTACGTTAAAACATTGACTGTTTGATGTTAGTCTTAGTAATAGCGTGGTGGCAGACAGCATGAAAAATATGCTTTATAA TCAAAGTGATTAAAACCTAG
Product: FolC bifunctional protein
Products: NA
Alternate protein names: Folylpolyglutamate synthase; Folylpoly-gamma-glutamate synthetase; FPGS; Tetrahydrofolylpolyglutamate synthase; Tetrahydrofolate synthase; Dihydrofolate synthase [H]
Number of amino acids: Translated: 457; Mature: 456
Protein sequence:
>457_residues MSDSLVSRSPSSTPDNQATLTEWLNYMQQIHVSAIDMGLSRVLPVAEALGVVQSAKDDAYVFTVAGTNGKGSTTAVIAQM CQAAGYKTALYQSPHLSVFNERVRIDGEMVSDETLIAAFSKVEAARLQCDLTLSFFEMTTLAALLIFAEADCDVWVLEVG LGGRLDVVNIIDPDMAVITNIAIDHVDWLGDNVEAIGAEKAGILRDGISVIYGATEMPNSVQQAIDKHQATCYQVSKEFS YCENNSTRWQYSNAAVTLQLPRPALSLTNTANALSAVLASPLDVDTNAIEQALKTVKLAGRFDYREVHERHWLFDVAHND QGVEFLLAQLVPLWQQHLTQQSTSEQVNQTSGEPATIKMLFSMLGDKDINKVVQRLTTAGLPISDWFIAEIDYPRAATTE HLQGILASYVDDSQIHEFARLQEATHAIINASQPQDLIVVCGSFHTIGEALSTLETR
Sequences:
>Translated_457_residues MSDSLVSRSPSSTPDNQATLTEWLNYMQQIHVSAIDMGLSRVLPVAEALGVVQSAKDDAYVFTVAGTNGKGSTTAVIAQM CQAAGYKTALYQSPHLSVFNERVRIDGEMVSDETLIAAFSKVEAARLQCDLTLSFFEMTTLAALLIFAEADCDVWVLEVG LGGRLDVVNIIDPDMAVITNIAIDHVDWLGDNVEAIGAEKAGILRDGISVIYGATEMPNSVQQAIDKHQATCYQVSKEFS YCENNSTRWQYSNAAVTLQLPRPALSLTNTANALSAVLASPLDVDTNAIEQALKTVKLAGRFDYREVHERHWLFDVAHND QGVEFLLAQLVPLWQQHLTQQSTSEQVNQTSGEPATIKMLFSMLGDKDINKVVQRLTTAGLPISDWFIAEIDYPRAATTE HLQGILASYVDDSQIHEFARLQEATHAIINASQPQDLIVVCGSFHTIGEALSTLETR >Mature_456_residues SDSLVSRSPSSTPDNQATLTEWLNYMQQIHVSAIDMGLSRVLPVAEALGVVQSAKDDAYVFTVAGTNGKGSTTAVIAQMC QAAGYKTALYQSPHLSVFNERVRIDGEMVSDETLIAAFSKVEAARLQCDLTLSFFEMTTLAALLIFAEADCDVWVLEVGL GGRLDVVNIIDPDMAVITNIAIDHVDWLGDNVEAIGAEKAGILRDGISVIYGATEMPNSVQQAIDKHQATCYQVSKEFSY CENNSTRWQYSNAAVTLQLPRPALSLTNTANALSAVLASPLDVDTNAIEQALKTVKLAGRFDYREVHERHWLFDVAHNDQ GVEFLLAQLVPLWQQHLTQQSTSEQVNQTSGEPATIKMLFSMLGDKDINKVVQRLTTAGLPISDWFIAEIDYPRAATTEH LQGILASYVDDSQIHEFARLQEATHAIINASQPQDLIVVCGSFHTIGEALSTLETR
Specific function: Conversion of folates to polyglutamate derivatives [H]
COG id: COG0285
COG function: function code H; Folylpolyglutamate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the folylpolyglutamate synthase family [H]
Homologues:
Organism=Homo sapiens, GI66932984, Length=351, Percent_Identity=27.9202279202279, Blast_Score=114, Evalue=3e-25, Organism=Homo sapiens, GI66932990, Length=351, Percent_Identity=27.9202279202279, Blast_Score=114, Evalue=3e-25, Organism=Escherichia coli, GI1788654, Length=446, Percent_Identity=37.6681614349776, Blast_Score=281, Evalue=5e-77, Organism=Caenorhabditis elegans, GI17553150, Length=325, Percent_Identity=27.0769230769231, Blast_Score=115, Evalue=5e-26, Organism=Caenorhabditis elegans, GI17553148, Length=325, Percent_Identity=27.0769230769231, Blast_Score=115, Evalue=6e-26, Organism=Caenorhabditis elegans, GI71984923, Length=325, Percent_Identity=27.0769230769231, Blast_Score=115, Evalue=7e-26, Organism=Saccharomyces cerevisiae, GI6323760, Length=444, Percent_Identity=27.2522522522523, Blast_Score=113, Evalue=5e-26, Organism=Saccharomyces cerevisiae, GI6324815, Length=306, Percent_Identity=28.7581699346405, Blast_Score=100, Evalue=4e-22, Organism=Drosophila melanogaster, GI24641571, Length=185, Percent_Identity=34.5945945945946, Blast_Score=111, Evalue=1e-24, Organism=Drosophila melanogaster, GI24581568, Length=182, Percent_Identity=30.2197802197802, Blast_Score=88, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018109 - InterPro: IPR001645 - InterPro: IPR004101 - InterPro: IPR013221 [H]
Pfam domain/function: PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: =6.3.2.17; =6.3.2.12 [H]
Molecular weight: Translated: 49992; Mature: 49861
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSLVSRSPSSTPDNQATLTEWLNYMQQIHVSAIDMGLSRVLPVAEALGVVQSAKDDAY CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE VFTVAGTNGKGSTTAVIAQMCQAAGYKTALYQSPHLSVFNERVRIDGEMVSDETLIAAFS EEEEECCCCCCHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHEECCCCCCCHHHHHHHH KVEAARLQCDLTLSFFEMTTLAALLIFAEADCDVWVLEVGLGGRLDVVNIIDPDMAVITN HHHHHHHEEEEEHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCCHHHHHH IAIDHVDWLGDNVEAIGAEKAGILRDGISVIYGATEMPNSVQQAIDKHQATCYQVSKEFS HHHHHHHHCCCCHHHCCCCHHHHHHHCHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHH YCENNSTRWQYSNAAVTLQLPRPALSLTNTANALSAVLASPLDVDTNAIEQALKTVKLAG HHCCCCCEEEECCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC RFDYREVHERHWLFDVAHNDQGVEFLLAQLVPLWQQHLTQQSTSEQVNQTSGEPATIKML CCCHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH FSMLGDKDINKVVQRLTTAGLPISDWFIAEIDYPRAATTEHLQGILASYVDDSQIHEFAR HHHHCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHH LQEATHAIINASQPQDLIVVCGSFHTIGEALSTLETR HHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCC >Mature Secondary Structure SDSLVSRSPSSTPDNQATLTEWLNYMQQIHVSAIDMGLSRVLPVAEALGVVQSAKDDAY CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE VFTVAGTNGKGSTTAVIAQMCQAAGYKTALYQSPHLSVFNERVRIDGEMVSDETLIAAFS EEEEECCCCCCHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHEECCCCCCCHHHHHHHH KVEAARLQCDLTLSFFEMTTLAALLIFAEADCDVWVLEVGLGGRLDVVNIIDPDMAVITN HHHHHHHEEEEEHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCCHHHHHH IAIDHVDWLGDNVEAIGAEKAGILRDGISVIYGATEMPNSVQQAIDKHQATCYQVSKEFS HHHHHHHHCCCCHHHCCCCHHHHHHHCHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHH YCENNSTRWQYSNAAVTLQLPRPALSLTNTANALSAVLASPLDVDTNAIEQALKTVKLAG HHCCCCCEEEECCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC RFDYREVHERHWLFDVAHNDQGVEFLLAQLVPLWQQHLTQQSTSEQVNQTSGEPATIKML CCCHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH FSMLGDKDINKVVQRLTTAGLPISDWFIAEIDYPRAATTEHLQGILASYVDDSQIHEFAR HHHHCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHH LQEATHAIINASQPQDLIVVCGSFHTIGEALSTLETR HHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3040739; 3040734; 9205837; 9278503; 1989505 [H]