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The map label for this gene is 93005281

Identifier: 93005281

GI number: 93005281

Start: 554050

End: 554652

Strand: Direct

Name: 93005281

Synonym: Pcryo_0451

Alternate gene names: NA

Gene position: 554050-554652 (Clockwise)

Preceding gene: 93005280

Following gene: 93005283

Centisome position: 18.11

GC content: 44.28

Gene sequence:

>603_bases
ATGTTAAAAAAGAACTTACTATCTATCGCCGTTGTGGCGGCAGCAATGTCATTAGCAGCTTGTAACGATAAAGAAGTCGT
TGCTGAGCCAGTTGAGCCAGAAGCAACCACTGATGTAGTCGTTGAGCCAGAAGTCGCAGCTGAACCAATGGTTGAAGCGG
ATGTTGCCCCTGAAGCAGCAGCTACGCAGACTATTGGTGAGATGGCAGCTGGCAATAAAGACTTGACCATCTTGACCGCT
GCACTACAGGCAGCTGGACTTGATTCGATGCTGATGGCTGAAGACAAGTACACAGTATTTGCCCCTACTGATGATGCCTT
TGCTGGTTTATTGACTAAGTTGAACATTACTAAAGAAGAATTACTTGCTGATCAAGCGACGCTAAAAAGTGTGCTTCCAT
ACCATGTCGTACCTATGGTTGTAAAAGCCGCTGATATTCCTTACGGTACTGCGATTGAAACGGCGAATGGTCAAACCATC
ACGATTAGTGATGCCAATGTCATTACAGATTCAAATGGTAATACCGCCAACATCGTTGGCACTGATATGATGGCAACCAA
TGGTGTAGTGCATGTAATTGATACAGTTTTATTGCCTAAATAA

Upstream 100 bases:

>100_bases
CATTTTAAAAAAACTGTTTATGCAAAAATTATTACTTATCGAATCAGTACTTATCAAATTTTTATTCACTCAATAGTTAT
TAATATCAAAGGAATGTCTT

Downstream 100 bases:

>100_bases
GTTTTGGTTAATAGACTTACTAGGTCTTTCTTGTAAACAGTAAATGATGTAAAAATACTTAAAGCCCAGCCATTGAGTTG
GGCTTTTTGCTGCCTATTAA

Product: beta-Ig-H3/fasciclin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MLKKNLLSIAVVAAAMSLAACNDKEVVAEPVEPEATTDVVVEPEVAAEPMVEADVAPEAAATQTIGEMAAGNKDLTILTA
ALQAAGLDSMLMAEDKYTVFAPTDDAFAGLLTKLNITKEELLADQATLKSVLPYHVVPMVVKAADIPYGTAIETANGQTI
TISDANVITDSNGNTANIVGTDMMATNGVVHVIDTVLLPK

Sequences:

>Translated_200_residues
MLKKNLLSIAVVAAAMSLAACNDKEVVAEPVEPEATTDVVVEPEVAAEPMVEADVAPEAAATQTIGEMAAGNKDLTILTA
ALQAAGLDSMLMAEDKYTVFAPTDDAFAGLLTKLNITKEELLADQATLKSVLPYHVVPMVVKAADIPYGTAIETANGQTI
TISDANVITDSNGNTANIVGTDMMATNGVVHVIDTVLLPK
>Mature_200_residues
MLKKNLLSIAVVAAAMSLAACNDKEVVAEPVEPEATTDVVVEPEVAAEPMVEADVAPEAAATQTIGEMAAGNKDLTILTA
ALQAAGLDSMLMAEDKYTVFAPTDDAFAGLLTKLNITKEELLADQATLKSVLPYHVVPMVVKAADIPYGTAIETANGQTI
TISDANVITDSNGNTANIVGTDMMATNGVVHVIDTVLLPK

Specific function: Unknown

COG id: COG2335

COG function: function code M; Secreted and surface protein containing fasciclin-like repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAS1 domain [H]

Homologues:

Organism=Homo sapiens, GI4507467, Length=136, Percent_Identity=34.5588235294118, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI209862911, Length=141, Percent_Identity=29.7872340425532, Blast_Score=67, Evalue=8e-12,
Organism=Homo sapiens, GI209863034, Length=141, Percent_Identity=29.7872340425532, Blast_Score=67, Evalue=8e-12,
Organism=Homo sapiens, GI209863011, Length=141, Percent_Identity=29.7872340425532, Blast_Score=67, Evalue=9e-12,
Organism=Homo sapiens, GI209862907, Length=141, Percent_Identity=29.7872340425532, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000782 [H]

Pfam domain/function: PF02469 Fasciclin [H]

EC number: NA

Molecular weight: Translated: 20722; Mature: 20722

Theoretical pI: Translated: 3.89; Mature: 3.89

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50213 FAS1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKNLLSIAVVAAAMSLAACNDKEVVAEPVEPEATTDVVVEPEVAAEPMVEADVAPEAA
CCCHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCEEECCCCCCCCCHHCCCCCCHH
ATQTIGEMAAGNKDLTILTAALQAAGLDSMLMAEDKYTVFAPTDDAFAGLLTKLNITKEE
HHHHHHHHHCCCCCHHHHEEHHHHCCCCCEEEECCCEEEECCCCHHHHHHHHHCCCCHHH
LLADQATLKSVLPYHVVPMVVKAADIPYGTAIETANGQTITISDANVITDSNGNTANIVG
HHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEECCCCCEEEEECCEEEECCCCCEEEEEE
TDMMATNGVVHVIDTVLLPK
CCHHHHCCHHHHHHHHHCCC
>Mature Secondary Structure
MLKKNLLSIAVVAAAMSLAACNDKEVVAEPVEPEATTDVVVEPEVAAEPMVEADVAPEAA
CCCHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCEEECCCCCCCCCHHCCCCCCHH
ATQTIGEMAAGNKDLTILTAALQAAGLDSMLMAEDKYTVFAPTDDAFAGLLTKLNITKEE
HHHHHHHHHCCCCCHHHHEEHHHHCCCCCEEEECCCEEEECCCCHHHHHHHHHCCCCHHH
LLADQATLKSVLPYHVVPMVVKAADIPYGTAIETANGQTITISDANVITDSNGNTANIVG
HHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEECCCCCEEEEECCEEEECCCCCEEEEEE
TDMMATNGVVHVIDTVLLPK
CCHHHHCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]