Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is 93005201
Identifier: 93005201
GI number: 93005201
Start: 449454
End: 450041
Strand: Reverse
Name: 93005201
Synonym: Pcryo_0371
Alternate gene names: NA
Gene position: 450041-449454 (Counterclockwise)
Preceding gene: 93005205
Following gene: 93005189
Centisome position: 14.71
GC content: 36.73
Gene sequence:
>588_bases ATGGCTATACCATATAGAACACTTTCAATATGCTCGAAGGATTCTAGACACTATGATGAACATGGGTTTAATTTAGTAGA ATTAATCGTAACCATTGCTATCTTAGCTATTATATTAACGATTGCCACACCTTATATTTTGACTCAGTTGGCAAGTATGG AAGCCAGACGTATTGCAAGCCAAATAGACACTACCTTGACTTTAGCAAAAGCTGAGAGTCATATTAGAAGACAAGATTTA CTGGTTTGCTTATCTAATGGGGGTGGTCTTTGCCATAGAGACAGCTTTAAAAAGTTATTATTATTCTCGGATAAAAATAA TAATAACAATTTTGATGTTGGTATTGATGATTTGTTAGAAGACCAAGCGCTGAACCCAAAATACAGTACTTTATATTTAC GGGTCGGTAATAACCGTCACTACACTAAATTTTGGGGCGATAGCGGCAGTCCTCGTGGGCATTTCGGACATATTAAATAC TGTCCAACCTCAACCTATAATCATACCATGTACCAAATCTCTTTTAATCAGACAGGAGGTATTACCTACAAACCTAACGA AAACCATCCGACCGGATGTGGTACATAA
Upstream 100 bases:
>100_bases AACTTGATAAAACAAATGGTGACACGAACAATAGATTTAAAAATACAATGAACATTTGAAACCATCTTAGTTATCCCTTT CATACAGGTGGCAGTCCATT
Downstream 100 bases:
>100_bases TGATATATCAATATAAGCTAAGAATAAACTGTCGTAGCTATCGGTGCATCGCTGTTTTCATCATAATAACCGCCTGCTCT ATCCCCACAAATAGCGCATC
Product: pilus assembly protein FimT-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MAIPYRTLSICSKDSRHYDEHGFNLVELIVTIAILAIILTIATPYILTQLASMEARRIASQIDTTLTLAKAESHIRRQDL LVCLSNGGGLCHRDSFKKLLLFSDKNNNNNFDVGIDDLLEDQALNPKYSTLYLRVGNNRHYTKFWGDSGSPRGHFGHIKY CPTSTYNHTMYQISFNQTGGITYKPNENHPTGCGT
Sequences:
>Translated_195_residues MAIPYRTLSICSKDSRHYDEHGFNLVELIVTIAILAIILTIATPYILTQLASMEARRIASQIDTTLTLAKAESHIRRQDL LVCLSNGGGLCHRDSFKKLLLFSDKNNNNNFDVGIDDLLEDQALNPKYSTLYLRVGNNRHYTKFWGDSGSPRGHFGHIKY CPTSTYNHTMYQISFNQTGGITYKPNENHPTGCGT >Mature_194_residues AIPYRTLSICSKDSRHYDEHGFNLVELIVTIAILAIILTIATPYILTQLASMEARRIASQIDTTLTLAKAESHIRRQDLL VCLSNGGGLCHRDSFKKLLLFSDKNNNNNFDVGIDDLLEDQALNPKYSTLYLRVGNNRHYTKFWGDSGSPRGHFGHIKYC PTSTYNHTMYQISFNQTGGITYKPNENHPTGCGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21942; Mature: 21811
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIPYRTLSICSKDSRHYDEHGFNLVELIVTIAILAIILTIATPYILTQLASMEARRIAS CCCCCHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QIDTTLTLAKAESHIRRQDLLVCLSNGGGLCHRDSFKKLLLFSDKNNNNNFDVGIDDLLE HHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHH DQALNPKYSTLYLRVGNNRHYTKFWGDSGSPRGHFGHIKYCPTSTYNHTMYQISFNQTGG HCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCC ITYKPNENHPTGCGT EEECCCCCCCCCCCC >Mature Secondary Structure AIPYRTLSICSKDSRHYDEHGFNLVELIVTIAILAIILTIATPYILTQLASMEARRIAS CCCCHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QIDTTLTLAKAESHIRRQDLLVCLSNGGGLCHRDSFKKLLLFSDKNNNNNFDVGIDDLLE HHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHH DQALNPKYSTLYLRVGNNRHYTKFWGDSGSPRGHFGHIKYCPTSTYNHTMYQISFNQTGG HCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCC ITYKPNENHPTGCGT EEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA