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The map label for this gene is ybaO [C]

Identifier: 93005187

GI number: 93005187

Start: 435596

End: 436063

Strand: Reverse

Name: ybaO [C]

Synonym: Pcryo_0356

Alternate gene names: 93005187

Gene position: 436063-435596 (Counterclockwise)

Preceding gene: 93005189

Following gene: 93005186

Centisome position: 14.25

GC content: 42.31

Gene sequence:

>468_bases
ATGAATCAACCACTAGATAAGACCGACAAGTCCATTTTGAATTTGATGCAAGATGATGCGACATTGCCTTTAAAAACCCT
TGCAGAACACGTCAACGTGTCTATCGCTACGGCTCAACGGCGTGTGCAAGCGCTGATAGACAATGGGGTGATTACTAAGC
AAGTGGCTATAGTAGACCCTCACAAGGTTGGTTATAGCTTGACGGCGGTGGTGATGGTAGAGATGGAGCGCTCCAATAAC
TCTATGCAGCATCGATTTGAGCGTTTGATGAATGCCCAGTCGCAAGTGATGAGCTGCTATGAAGTATCTGGCGATGCTGA
CTTTATGCTCATGGTGAGTGCTAAAAATATGAAGGATTATCATCAGTTCACTCGCAATTTGCTCACTTACGAAAATAATG
TACGTAATTTTAAGAGTCAATTTGTGATGAACTTTACCAAGAGTGGTACGAAGATTTATTTAGATTGA

Upstream 100 bases:

>100_bases
ATTAATAATTTATTACTTTATGATTTATAGTGACAGTACTTCTATAATAAGTGAGTTGTAATCATCCTCTGTTAATGTCT
TCACCTTAAAGCGAAACCCT

Downstream 100 bases:

>100_bases
TAGCTGCTTTTTGCCTAATAGCTATCCATAGATTACTCTGCGCTATCAATAACTTATCGCTAATACGTTTATTACATCAT
GAACGTTATTCATGTTAAAA

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MNQPLDKTDKSILNLMQDDATLPLKTLAEHVNVSIATAQRRVQALIDNGVITKQVAIVDPHKVGYSLTAVVMVEMERSNN
SMQHRFERLMNAQSQVMSCYEVSGDADFMLMVSAKNMKDYHQFTRNLLTYENNVRNFKSQFVMNFTKSGTKIYLD

Sequences:

>Translated_155_residues
MNQPLDKTDKSILNLMQDDATLPLKTLAEHVNVSIATAQRRVQALIDNGVITKQVAIVDPHKVGYSLTAVVMVEMERSNN
SMQHRFERLMNAQSQVMSCYEVSGDADFMLMVSAKNMKDYHQFTRNLLTYENNVRNFKSQFVMNFTKSGTKIYLD
>Mature_155_residues
MNQPLDKTDKSILNLMQDDATLPLKTLAEHVNVSIATAQRRVQALIDNGVITKQVAIVDPHKVGYSLTAVVMVEMERSNN
SMQHRFERLMNAQSQVMSCYEVSGDADFMLMVSAKNMKDYHQFTRNLLTYENNVRNFKSQFVMNFTKSGTKIYLD

Specific function: Unknown

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081742, Length=148, Percent_Identity=31.0810810810811, Blast_Score=100, Evalue=5e-23,
Organism=Escherichia coli, GI1787116, Length=150, Percent_Identity=25.3333333333333, Blast_Score=64, Evalue=5e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17714; Mature: 17714

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
7.1 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQPLDKTDKSILNLMQDDATLPLKTLAEHVNVSIATAQRRVQALIDNGVITKQVAIVDP
CCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEEEECC
HKVGYSLTAVVMVEMERSNNSMQHRFERLMNAQSQVMSCYEVSGDADFMLMVSAKNMKDY
HHCCHHEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHH
HQFTRNLLTYENNVRNFKSQFVMNFTKSGTKIYLD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
>Mature Secondary Structure
MNQPLDKTDKSILNLMQDDATLPLKTLAEHVNVSIATAQRRVQALIDNGVITKQVAIVDP
CCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEEEECC
HKVGYSLTAVVMVEMERSNNSMQHRFERLMNAQSQVMSCYEVSGDADFMLMVSAKNMKDY
HHCCHHEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHH
HQFTRNLLTYENNVRNFKSQFVMNFTKSGTKIYLD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]