Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is 93005184
Identifier: 93005184
GI number: 93005184
Start: 431425
End: 431955
Strand: Reverse
Name: 93005184
Synonym: Pcryo_0353
Alternate gene names: NA
Gene position: 431955-431425 (Counterclockwise)
Preceding gene: 93005185
Following gene: 93005179
Centisome position: 14.12
GC content: 45.57
Gene sequence:
>531_bases ATGCCAAAGCGTCTTATAACCATGCTCATCATTACGACTGCCAGTATGTGGGCGCTGTCAGGCTGCGATAATAGTACGGA TACTACGGCTAAAAAAATGGATACATCAGTATCGACAACGGGCTCAGCGGTAGCAAATACGATAGATTGGTCAGTTATGG ATAGCGGCGAAAAGCCAGCCGATCTCGCTAATTATCAATATCCGTTTGCGCTCGATAGCCAAAATGTCCGCGATTATGCA GAGTATTTCAAAGTCGATAATGCTACGGCTCAGCATAATCTGACCGTAAGTATGGCAAGTAACGAGGCGCTATCGAAAGC CTTGGATCAGCTGAGTGAAAGCTATGTCTCACATGAATTGACCGATGATAAAGAAATGAAGCTAATCATCCATACCACGC CTGATATCGCTGCCAGCAGCTATGATTATGTGTTGGTTGGGGAATTTGCTAAAGGGTTGGTATTACCTATCGTGATACAG CCAGATGGTAAGAAAGGTGAAGTGAAGGCGCATGGTGAGATGGCGGAGTAG
Upstream 100 bases:
>100_bases AGCATCCTTTTTTGCATTTCGCTAGAGAAGCACACAGAAAGCTGTCAAAATAGCGCCTCTATCAAAACATCTCATGACTT ATCATAAAGAGGATACCTCG
Downstream 100 bases:
>100_bases AAGTTAATAGCGTGTTTTTTATTTCGTATCACACGCCATTAAAAGATATTAAATTTGGCGATAAGGGTTATTTGAGAGTT CGATTTTGACATCAGTATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MPKRLITMLIITTASMWALSGCDNSTDTTAKKMDTSVSTTGSAVANTIDWSVMDSGEKPADLANYQYPFALDSQNVRDYA EYFKVDNATAQHNLTVSMASNEALSKALDQLSESYVSHELTDDKEMKLIIHTTPDIAASSYDYVLVGEFAKGLVLPIVIQ PDGKKGEVKAHGEMAE
Sequences:
>Translated_176_residues MPKRLITMLIITTASMWALSGCDNSTDTTAKKMDTSVSTTGSAVANTIDWSVMDSGEKPADLANYQYPFALDSQNVRDYA EYFKVDNATAQHNLTVSMASNEALSKALDQLSESYVSHELTDDKEMKLIIHTTPDIAASSYDYVLVGEFAKGLVLPIVIQ PDGKKGEVKAHGEMAE >Mature_175_residues PKRLITMLIITTASMWALSGCDNSTDTTAKKMDTSVSTTGSAVANTIDWSVMDSGEKPADLANYQYPFALDSQNVRDYAE YFKVDNATAQHNLTVSMASNEALSKALDQLSESYVSHELTDDKEMKLIIHTTPDIAASSYDYVLVGEFAKGLVLPIVIQP DGKKGEVKAHGEMAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19162; Mature: 19030
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKRLITMLIITTASMWALSGCDNSTDTTAKKMDTSVSTTGSAVANTIDWSVMDSGEKPA CCHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHCCCCCCCCCHHHHHCCEEEECCCCCCC DLANYQYPFALDSQNVRDYAEYFKVDNATAQHNLTVSMASNEALSKALDQLSESYVSHEL CCCCCCCCEEECCCCHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCC TDDKEMKLIIHTTPDIAASSYDYVLVGEFAKGLVLPIVIQPDGKKGEVKAHGEMAE CCCCCEEEEEEECCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCEEECCCCCC >Mature Secondary Structure PKRLITMLIITTASMWALSGCDNSTDTTAKKMDTSVSTTGSAVANTIDWSVMDSGEKPA CHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHCCCCCCCCCHHHHHCCEEEECCCCCCC DLANYQYPFALDSQNVRDYAEYFKVDNATAQHNLTVSMASNEALSKALDQLSESYVSHEL CCCCCCCCEEECCCCHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCC TDDKEMKLIIHTTPDIAASSYDYVLVGEFAKGLVLPIVIQPDGKKGEVKAHGEMAE CCCCCEEEEEEECCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA