Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is hslO [H]
Identifier: 93005164
GI number: 93005164
Start: 403279
End: 404259
Strand: Reverse
Name: hslO [H]
Synonym: Pcryo_0333
Alternate gene names: 93005164
Gene position: 404259-403279 (Counterclockwise)
Preceding gene: 93005176
Following gene: 93005153
Centisome position: 13.21
GC content: 45.36
Gene sequence:
>981_bases ATGACCCAAGATACCCAAACTCCGAATGCTCCTGAACAAAATACTGATCTGATGCAAGATAACGACATTCGCCAACGCTT TTTTATTGAAGACTCTCCGGTGCGCGGTGATGTGGTGCGCTTATCGCGTAGCTATGCGACGACCATTGCGCAAAAGCCTT ATCCTGAAGCACTAAAACGCTTACTCGGTGAGATGTTGACGGCTGCAAGTTTGCTGATTGGTACTGTTAAAATCAATGGT CGCTTGTCGATTCAATTGCAATCATCAGATAGCGATAGTTTGCTGAATTGGGCGATGGCTGAATGTGATCAAAACGGTAT TATCCGCGCTCTTGCCAGCTGGAAAGCTGATACTGACGAGCACGTGCAAGCGTGGAATAATATGCTGCATGCTAAAGAAG CGTTTGCTGAACTGGGCGCTACTGGTCAAGGCGTATTATTTATTAATATCCAACCGGATGGCGGCGAGCCGTATCAAGGT ATTGTTGAACGTAGCCATGACAATCTGGCAGATTGCTTGGCGCATTATCAAAAGCAATCGGCACAGATTCCAACGCTGAT TAATTTGGCATCTGATGGTTTACAAGCGGGTGGCATCTTGGTGCAAATGCTGCCGCGTACCGCTCAAGAAACCTACGAAG TTGAGCAAAATGAAGATGCTGGTATTGATGATGACTTGTGGACACGATTGTCTGTATTGACGCGTACACTGAAAGCGGAA GAATTGACCACGCTTGATACCAATGAGATTTTGTATCGCTTATATCATGAAGAAAAAGTCGTTGCTCCTGAGCCTATCTC GCTATCGTTTGGTTGTACGTGTTCACGTGAAAAGTGTGAAATGGCAATCGAGCAAATCGGCGAAACAGAAGCATTGGATA TCGTTGCAGAGCAAAACGGTACCTTTGAGATGGATTGCGGATTCTGCGGTGAGATTTATAAATTTAATGAAGACGATGTG GCAGCGATTTTTGCTGAGTAG
Upstream 100 bases:
>100_bases GGCACTGTATTTTTTAAAAAGTGTATCTACTATAGATACGATTGATAAATCCGAACCTATCCCCATAAAGCTAGCAACTT CTTAATCTTATACATGACCT
Downstream 100 bases:
>100_bases TCTTTTATCTCATTGATTTAAGTATAGTCAATTCCAAATAAAACAGATACTTTATATTCCAACGCAGTACTGGTATAAAT TTTTCTGGCATGCTGTGACT
Product: Hsp33 protein
Products: NA
Alternate protein names: Heat shock protein 33 homolog; HSP33 [H]
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MTQDTQTPNAPEQNTDLMQDNDIRQRFFIEDSPVRGDVVRLSRSYATTIAQKPYPEALKRLLGEMLTAASLLIGTVKING RLSIQLQSSDSDSLLNWAMAECDQNGIIRALASWKADTDEHVQAWNNMLHAKEAFAELGATGQGVLFINIQPDGGEPYQG IVERSHDNLADCLAHYQKQSAQIPTLINLASDGLQAGGILVQMLPRTAQETYEVEQNEDAGIDDDLWTRLSVLTRTLKAE ELTTLDTNEILYRLYHEEKVVAPEPISLSFGCTCSREKCEMAIEQIGETEALDIVAEQNGTFEMDCGFCGEIYKFNEDDV AAIFAE
Sequences:
>Translated_326_residues MTQDTQTPNAPEQNTDLMQDNDIRQRFFIEDSPVRGDVVRLSRSYATTIAQKPYPEALKRLLGEMLTAASLLIGTVKING RLSIQLQSSDSDSLLNWAMAECDQNGIIRALASWKADTDEHVQAWNNMLHAKEAFAELGATGQGVLFINIQPDGGEPYQG IVERSHDNLADCLAHYQKQSAQIPTLINLASDGLQAGGILVQMLPRTAQETYEVEQNEDAGIDDDLWTRLSVLTRTLKAE ELTTLDTNEILYRLYHEEKVVAPEPISLSFGCTCSREKCEMAIEQIGETEALDIVAEQNGTFEMDCGFCGEIYKFNEDDV AAIFAE >Mature_325_residues TQDTQTPNAPEQNTDLMQDNDIRQRFFIEDSPVRGDVVRLSRSYATTIAQKPYPEALKRLLGEMLTAASLLIGTVKINGR LSIQLQSSDSDSLLNWAMAECDQNGIIRALASWKADTDEHVQAWNNMLHAKEAFAELGATGQGVLFINIQPDGGEPYQGI VERSHDNLADCLAHYQKQSAQIPTLINLASDGLQAGGILVQMLPRTAQETYEVEQNEDAGIDDDLWTRLSVLTRTLKAEE LTTLDTNEILYRLYHEEKVVAPEPISLSFGCTCSREKCEMAIEQIGETEALDIVAEQNGTFEMDCGFCGEIYKFNEDDVA AIFAE
Specific function: Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress [H]
COG id: COG1281
COG function: function code O; Disulfide bond chaperones of the HSP33 family
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HSP33 family [H]
Homologues:
Organism=Escherichia coli, GI87082260, Length=311, Percent_Identity=35.048231511254, Blast_Score=176, Evalue=2e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000397 - InterPro: IPR016154 - InterPro: IPR016153 - InterPro: IPR023212 [H]
Pfam domain/function: PF01430 HSP33 [H]
EC number: NA
Molecular weight: Translated: 36214; Mature: 36083
Theoretical pI: Translated: 4.08; Mature: 4.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQDTQTPNAPEQNTDLMQDNDIRQRFFIEDSPVRGDVVRLSRSYATTIAQKPYPEALKR CCCCCCCCCCCCCCCCCCCCCCCHHHEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH LLGEMLTAASLLIGTVKINGRLSIQLQSSDSDSLLNWAMAECDQNGIIRALASWKADTDE HHHHHHHHHHHHHEEEEECCEEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCHH HVQAWNNMLHAKEAFAELGATGQGVLFINIQPDGGEPYQGIVERSHDNLADCLAHYQKQS HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHCCCCCHHHHHHHHHHHC AQIPTLINLASDGLQAGGILVQMLPRTAQETYEVEQNEDAGIDDDLWTRLSVLTRTLKAE CCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH ELTTLDTNEILYRLYHEEKVVAPEPISLSFGCTCSREKCEMAIEQIGETEALDIVAEQNG HHCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCHHEEEEECCCC TFEMDCGFCGEIYKFNEDDVAAIFAE CEEECCCCCCHHEEECCCCEEEEECC >Mature Secondary Structure TQDTQTPNAPEQNTDLMQDNDIRQRFFIEDSPVRGDVVRLSRSYATTIAQKPYPEALKR CCCCCCCCCCCCCCCCCCCCCCHHHEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH LLGEMLTAASLLIGTVKINGRLSIQLQSSDSDSLLNWAMAECDQNGIIRALASWKADTDE HHHHHHHHHHHHHEEEEECCEEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCHH HVQAWNNMLHAKEAFAELGATGQGVLFINIQPDGGEPYQGIVERSHDNLADCLAHYQKQS HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHCCCCCHHHHHHHHHHHC AQIPTLINLASDGLQAGGILVQMLPRTAQETYEVEQNEDAGIDDDLWTRLSVLTRTLKAE CCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH ELTTLDTNEILYRLYHEEKVVAPEPISLSFGCTCSREKCEMAIEQIGETEALDIVAEQNG HHCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCHHEEEEECCCC TFEMDCGFCGEIYKFNEDDVAAIFAE CEEECCCCCCHHEEECCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA