| Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
|---|---|
| Accession | NC_007969 |
| Length | 3,059,876 |
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The map label for this gene is nadE [H]
Identifier: 93005127
GI number: 93005127
Start: 355132
End: 356835
Strand: Reverse
Name: nadE [H]
Synonym: Pcryo_0296
Alternate gene names: 93005127
Gene position: 356835-355132 (Counterclockwise)
Preceding gene: 93005131
Following gene: 93005126
Centisome position: 11.66
GC content: 44.01
Gene sequence:
>1704_bases ATGTCAAAAGACACTGCAAAAGATACTGATAACCCCAACCTTACCGCTTCCAATAAGGGCAACCAAGCTTCAAAATCGCA AGATAGCGTTACGTTTGCCCTAGCCCAATCTCACTTTTTAGTTGGCGATATCAAAGCCAATGCTGAAAAAATGCGCACCC TAGCACTGCAAGCACGCGAGCAAGGTGCTGATGTCATTATTTTCCCAGAGCTGGCCTTATTGGGCTATCCGCCGCAAGAT TTGTTGCTACGTCCTAGTCTTTCAGGACGTATCAAAAGCGCGTTGTCTACCCTAAGCGACATCGATGATATCGTCATGAT TGTTGGCTATCCGCATGTTGATCATCATGGCACCTTTAACTCAGCCGCTATCTTGCATAATGGTCATCAAAAGGGCTTTT ATCATAAGCAAATTTTGCCAAACTATGGCGTATTTGATGAGCGCCGTTACTTTGATAAAGGACGTAATCAAGTCTTATTT GATTATAAAGGTATCACCATTGGTCTGCTGATCTGTGAAGATTTATGGGAAAAAGGTCCTATTGCCGAGCTCAAAAAGCA AGGCGCTGACCTTATTGTGAGCTTAAACGCTTCACCATTTGAGATCGAAAAACAAGATACTCGCAAAACAATGCTGGCCA AGCGTAGCCGTGAAAACAACTTACCTATCGTTTATCTTAATGCCGTTGGCGGTCAAGATGATTTGGTATTTGACGGTGGC TCTATGGCCATTCAAGCAGACGGCAGCGTCGCACATGAAGCCTCACGCTTTATGAATCAGTTACTACTGGCAAGCTTTGA TGCAAAAACAGCAAAATTTGATACACAAGCAAAGGCACCTTTATCATTAAGCCGTGAATCAGAGATGTACCAAGCATTGG TCGTAGGGTTGCGTGATTATGTCAATCTTTCAGGGTTTACTGGCATCATCGTTGGTTTATCAGGCGGTATTGATTCAGCA TTGACACTATGTATCGCGGTCGACGCACTGGGTGCTGACAAGGTCTATGCAGTCATGATGCCTTACGAATATACCTCGCA AATCAGTTTAGAGGACGCGCAAGCCCAAGCACGCCGTCTCAATGTCTCTTATACCGTTTGTCCTATCTTTGATGCAGTCG AAGGTATCCGTCATACGCTTGCGCCACTATTTAACAAGTCACCTGCTGATACCACCGAAGAGAACATCCAAGCACGTGCA CGCGGTGTGGTACTTATGGCATTGTCTAATAAATTTGGGCATTTGGTCATCACGACTGGTAATAAATCAGAGCTAGCTGT TGGCTATTCGACCTTATATGGCGATATGGCAGGCGGTTTTGACGTTTTAAAAGACGTGTATAAGTCACAAGTTTATAAAT TGGCCAGCTATCGTAACCGTTTAGAAGATACGCCTGTTATTCCTGAGCGCGTCATTACTCGTCCACCATCTGCTGAGCTA CGTCCCGATCAAAAAGACCAAGACAGCTTGCCTGATTATGATGTTTTAGACGGTATCTTAATGTCATATATCGATGAAGA TATGGGCTATCAAGATATTATTAATAAAGGGTTTGATGCTGATTTGGTCGCCAAGGTTATCCAAATGGTCGACAATAGTG AATACAAGCGCTCGCAGGCACCAATTGGTACTAAGATTAGCCATAAAGCCTTTGGTCGTGAGCGCCGTTACCCGCTCGTC AATAAATGGTCAATAAAAGGCTAA
Upstream 100 bases:
>100_bases ATATTTTGAGTCGTTTTCGGAAACATATTTTCATTTGGTTTTATTTGAAACCAAGAAATATATAACAGATTTAAATAACC TATTGATAGGAACAATAACA
Downstream 100 bases:
>100_bases GCCTTGATACTGAATTTATCAAAAACCTTTTAGAGCCATTTTTTAAAGGCTTGATAAATTTAAGTTTTTATCTAATATCA TAAAATTGTTTTATAATTAG
Product: NAD+ synthetase
Products: NA
Alternate protein names: NAD(+) synthase [glutamine-hydrolysing] [H]
Number of amino acids: Translated: 567; Mature: 566
Protein sequence:
>567_residues MSKDTAKDTDNPNLTASNKGNQASKSQDSVTFALAQSHFLVGDIKANAEKMRTLALQAREQGADVIIFPELALLGYPPQD LLLRPSLSGRIKSALSTLSDIDDIVMIVGYPHVDHHGTFNSAAILHNGHQKGFYHKQILPNYGVFDERRYFDKGRNQVLF DYKGITIGLLICEDLWEKGPIAELKKQGADLIVSLNASPFEIEKQDTRKTMLAKRSRENNLPIVYLNAVGGQDDLVFDGG SMAIQADGSVAHEASRFMNQLLLASFDAKTAKFDTQAKAPLSLSRESEMYQALVVGLRDYVNLSGFTGIIVGLSGGIDSA LTLCIAVDALGADKVYAVMMPYEYTSQISLEDAQAQARRLNVSYTVCPIFDAVEGIRHTLAPLFNKSPADTTEENIQARA RGVVLMALSNKFGHLVITTGNKSELAVGYSTLYGDMAGGFDVLKDVYKSQVYKLASYRNRLEDTPVIPERVITRPPSAEL RPDQKDQDSLPDYDVLDGILMSYIDEDMGYQDIINKGFDADLVAKVIQMVDNSEYKRSQAPIGTKISHKAFGRERRYPLV NKWSIKG
Sequences:
>Translated_567_residues MSKDTAKDTDNPNLTASNKGNQASKSQDSVTFALAQSHFLVGDIKANAEKMRTLALQAREQGADVIIFPELALLGYPPQD LLLRPSLSGRIKSALSTLSDIDDIVMIVGYPHVDHHGTFNSAAILHNGHQKGFYHKQILPNYGVFDERRYFDKGRNQVLF DYKGITIGLLICEDLWEKGPIAELKKQGADLIVSLNASPFEIEKQDTRKTMLAKRSRENNLPIVYLNAVGGQDDLVFDGG SMAIQADGSVAHEASRFMNQLLLASFDAKTAKFDTQAKAPLSLSRESEMYQALVVGLRDYVNLSGFTGIIVGLSGGIDSA LTLCIAVDALGADKVYAVMMPYEYTSQISLEDAQAQARRLNVSYTVCPIFDAVEGIRHTLAPLFNKSPADTTEENIQARA RGVVLMALSNKFGHLVITTGNKSELAVGYSTLYGDMAGGFDVLKDVYKSQVYKLASYRNRLEDTPVIPERVITRPPSAEL RPDQKDQDSLPDYDVLDGILMSYIDEDMGYQDIINKGFDADLVAKVIQMVDNSEYKRSQAPIGTKISHKAFGRERRYPLV NKWSIKG >Mature_566_residues SKDTAKDTDNPNLTASNKGNQASKSQDSVTFALAQSHFLVGDIKANAEKMRTLALQAREQGADVIIFPELALLGYPPQDL LLRPSLSGRIKSALSTLSDIDDIVMIVGYPHVDHHGTFNSAAILHNGHQKGFYHKQILPNYGVFDERRYFDKGRNQVLFD YKGITIGLLICEDLWEKGPIAELKKQGADLIVSLNASPFEIEKQDTRKTMLAKRSRENNLPIVYLNAVGGQDDLVFDGGS MAIQADGSVAHEASRFMNQLLLASFDAKTAKFDTQAKAPLSLSRESEMYQALVVGLRDYVNLSGFTGIIVGLSGGIDSAL TLCIAVDALGADKVYAVMMPYEYTSQISLEDAQAQARRLNVSYTVCPIFDAVEGIRHTLAPLFNKSPADTTEENIQARAR GVVLMALSNKFGHLVITTGNKSELAVGYSTLYGDMAGGFDVLKDVYKSQVYKLASYRNRLEDTPVIPERVITRPPSAELR PDQKDQDSLPDYDVLDGILMSYIDEDMGYQDIINKGFDADLVAKVIQMVDNSEYKRSQAPIGTKISHKAFGRERRYPLVN KWSIKG
Specific function: Can use both glutamine or ammonia as a nitrogen source [H]
COG id: COG0171
COG function: function code H; NAD synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014445 - InterPro: IPR022310 - InterPro: IPR003694 - InterPro: IPR000132 - InterPro: IPR003010 - InterPro: IPR014729 [H]
Pfam domain/function: PF00795 CN_hydrolase; PF02540 NAD_synthase [H]
EC number: =6.3.5.1 [H]
Molecular weight: Translated: 62525; Mature: 62394
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: PS00920 NITRIL_CHT_1 ; PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKDTAKDTDNPNLTASNKGNQASKSQDSVTFALAQSHFLVGDIKANAEKMRTLALQARE CCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHH QGADVIIFPELALLGYPPQDLLLRPSLSGRIKSALSTLSDIDDIVMIVGYPHVDHHGTFN CCCCEEEECCHHHCCCCCHHHEECCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCC SAAILHNGHQKGFYHKQILPNYGVFDERRYFDKGRNQVLFDYKGITIGLLICEDLWEKGP CEEEEECCCCCCCCHHHHCCCCCCCCHHHHHHCCCCEEEEEECCCEEEEHHHHHHHCCCC IAELKKQGADLIVSLNASPFEIEKQDTRKTMLAKRSRENNLPIVYLNAVGGQDDLVFDGG HHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEECCC SMAIQADGSVAHEASRFMNQLLLASFDAKTAKFDTQAKAPLSLSRESEMYQALVVGLRDY CEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH VNLSGFTGIIVGLSGGIDSALTLCIAVDALGADKVYAVMMPYEYTSQISLEDAQAQARRL HCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEECHHHHHHHHHC NVSYTVCPIFDAVEGIRHTLAPLFNKSPADTTEENIQARARGVVLMALSNKFGHLVITTG CCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCEEEEEECCCCCEEEEEEC NKSELAVGYSTLYGDMAGGFDVLKDVYKSQVYKLASYRNRLEDTPVIPERVITRPPSAEL CCCCEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCC RPDQKDQDSLPDYDVLDGILMSYIDEDMGYQDIINKGFDADLVAKVIQMVDNSEYKRSQA CCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHCCCHHHHHCC PIGTKISHKAFGRERRYPLVNKWSIKG CCCCCCCHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure SKDTAKDTDNPNLTASNKGNQASKSQDSVTFALAQSHFLVGDIKANAEKMRTLALQARE CCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHH QGADVIIFPELALLGYPPQDLLLRPSLSGRIKSALSTLSDIDDIVMIVGYPHVDHHGTFN CCCCEEEECCHHHCCCCCHHHEECCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCC SAAILHNGHQKGFYHKQILPNYGVFDERRYFDKGRNQVLFDYKGITIGLLICEDLWEKGP CEEEEECCCCCCCCHHHHCCCCCCCCHHHHHHCCCCEEEEEECCCEEEEHHHHHHHCCCC IAELKKQGADLIVSLNASPFEIEKQDTRKTMLAKRSRENNLPIVYLNAVGGQDDLVFDGG HHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEECCC SMAIQADGSVAHEASRFMNQLLLASFDAKTAKFDTQAKAPLSLSRESEMYQALVVGLRDY CEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH VNLSGFTGIIVGLSGGIDSALTLCIAVDALGADKVYAVMMPYEYTSQISLEDAQAQARRL HCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEECHHHHHHHHHC NVSYTVCPIFDAVEGIRHTLAPLFNKSPADTTEENIQARARGVVLMALSNKFGHLVITTG CCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCEEEEEECCCCCEEEEEEC NKSELAVGYSTLYGDMAGGFDVLKDVYKSQVYKLASYRNRLEDTPVIPERVITRPPSAEL CCCCEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCC RPDQKDQDSLPDYDVLDGILMSYIDEDMGYQDIINKGFDADLVAKVIQMVDNSEYKRSQA CCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHCCCHHHHHCC PIGTKISHKAFGRERRYPLVNKWSIKG CCCCCCCHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]