Click here to switch to the map view.

The map label for this gene is yiiM [C]

Identifier: 93005044

GI number: 93005044

Start: 255222

End: 256022

Strand: Reverse

Name: yiiM [C]

Synonym: Pcryo_0213

Alternate gene names: 93005044

Gene position: 256022-255222 (Counterclockwise)

Preceding gene: 93005045

Following gene: 93005043

Centisome position: 8.37

GC content: 44.32

Gene sequence:

>801_bases
ATGAACTTAGAACCTATGAACATACAACCTATAAACTCAAAAACGATAGCATCTTCTAGCCAAAAAAATACTGCTGACTT
TAACCAAACCTTGCCGCTCCATATCGCTACCCTCACCTGCGTTCGCGCTGGCAAAGCCATGCCATTTACCCGTGAAGAAA
TGAGCGCCATCGATAAAGCACCAATCAAAGCACACGTCGCTGTCAACTTTATGGGTCTCACAACTGATGAGCAAGCCGAT
AGACGTCATCATGGTGGTCCACTAAAAGCAGTACATCAACTAGCGACGGCGACTTATGACAAGATTAATGCAGAGTTTAG
CTTGAAAGTGCGTGTTGGCACATTGGGTGAAAACCTCACTACAGAAGCAGTAAATGGTTTGCTAGAAATGACGGAAGCGA
CAGTTTGTATTGGTGACGTTTTTCAGTATGGTCAAGATGAAAGCATTGATGGGAATGGTGGCGACAGCGTGCAATTACGT
ATCGTCCAACCGCGCCGCCCCTGCTACAAAATCAATGACCAAATCGGACAATTTACCAAAGTGCCAAATATTGCGTCTTG
GGTCAGCAAACAAGGCATCGCTGGTTGGTATTTTCAAGTCGTTCGTGATGGCATGATCAGCGCTGATTTACCGGTATATT
TAATCGAACGCCCCTATCCTTTTGCGACACTTGAGAAACTGTGGCAGTTATCAAACTCAAAAGAGAAATTTGCCGCAGAA
GTTATTGAACCTTGGCTTGCGATTGAGTGTTTGGAAGAGAGTTGGAAGAAGGTTTTGGCAAAGAAGATTAAAAAGGGTTA
G

Upstream 100 bases:

>100_bases
TACCATTAGAGGAATGATTAAGCTAAGATAATACGCATTATTAATACCAATATCGATATAACCTCTCCCCTAATAAATCC
CTATAGATTAGGAATGACTT

Downstream 100 bases:

>100_bases
CATTTCATGGCAAAAAATATCTTTTTAGCATTAGCATGTGCCTTAACGCTGCCTTTAGTTGGCTGCGTGACCACTAATAA
CACCCAAATAGCGAATACTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MNLEPMNIQPINSKTIASSSQKNTADFNQTLPLHIATLTCVRAGKAMPFTREEMSAIDKAPIKAHVAVNFMGLTTDEQAD
RRHHGGPLKAVHQLATATYDKINAEFSLKVRVGTLGENLTTEAVNGLLEMTEATVCIGDVFQYGQDESIDGNGGDSVQLR
IVQPRRPCYKINDQIGQFTKVPNIASWVSKQGIAGWYFQVVRDGMISADLPVYLIERPYPFATLEKLWQLSNSKEKFAAE
VIEPWLAIECLEESWKKVLAKKIKKG

Sequences:

>Translated_266_residues
MNLEPMNIQPINSKTIASSSQKNTADFNQTLPLHIATLTCVRAGKAMPFTREEMSAIDKAPIKAHVAVNFMGLTTDEQAD
RRHHGGPLKAVHQLATATYDKINAEFSLKVRVGTLGENLTTEAVNGLLEMTEATVCIGDVFQYGQDESIDGNGGDSVQLR
IVQPRRPCYKINDQIGQFTKVPNIASWVSKQGIAGWYFQVVRDGMISADLPVYLIERPYPFATLEKLWQLSNSKEKFAAE
VIEPWLAIECLEESWKKVLAKKIKKG
>Mature_266_residues
MNLEPMNIQPINSKTIASSSQKNTADFNQTLPLHIATLTCVRAGKAMPFTREEMSAIDKAPIKAHVAVNFMGLTTDEQAD
RRHHGGPLKAVHQLATATYDKINAEFSLKVRVGTLGENLTTEAVNGLLEMTEATVCIGDVFQYGQDESIDGNGGDSVQLR
IVQPRRPCYKINDQIGQFTKVPNIASWVSKQGIAGWYFQVVRDGMISADLPVYLIERPYPFATLEKLWQLSNSKEKFAAE
VIEPWLAIECLEESWKKVLAKKIKKG

Specific function: Unknown

COG id: COG2258

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MOSC domain [H]

Homologues:

Organism=Escherichia coli, GI87082350, Length=232, Percent_Identity=26.7241379310345, Blast_Score=89, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005163
- InterPro:   IPR005302
- InterPro:   IPR015808
- InterPro:   IPR011037 [H]

Pfam domain/function: PF03475 3-alpha; PF03473 MOSC [H]

EC number: NA

Molecular weight: Translated: 29564; Mature: 29564

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLEPMNIQPINSKTIASSSQKNTADFNQTLPLHIATLTCVRAGKAMPFTREEMSAIDKA
CCCCCCCEECCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCC
PIKAHVAVNFMGLTTDEQADRRHHGGPLKAVHQLATATYDKINAEFSLKVRVGTLGENLT
CCEEEEEEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCHH
TEAVNGLLEMTEATVCIGDVFQYGQDESIDGNGGDSVQLRIVQPRRPCYKINDQIGQFTK
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHC
VPNIASWVSKQGIAGWYFQVVRDGMISADLPVYLIERPYPFATLEKLWQLSNSKEKFAAE
CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHH
VIEPWLAIECLEESWKKVLAKKIKKG
HHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNLEPMNIQPINSKTIASSSQKNTADFNQTLPLHIATLTCVRAGKAMPFTREEMSAIDKA
CCCCCCCEECCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCC
PIKAHVAVNFMGLTTDEQADRRHHGGPLKAVHQLATATYDKINAEFSLKVRVGTLGENLT
CCEEEEEEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCHH
TEAVNGLLEMTEATVCIGDVFQYGQDESIDGNGGDSVQLRIVQPRRPCYKINDQIGQFTK
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHC
VPNIASWVSKQGIAGWYFQVVRDGMISADLPVYLIERPYPFATLEKLWQLSNSKEKFAAE
CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHH
VIEPWLAIECLEESWKKVLAKKIKKG
HHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 8805245 [H]