Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
---|---|
Accession | NC_007969 |
Length | 3,059,876 |
Click here to switch to the map view.
The map label for this gene is 93005042
Identifier: 93005042
GI number: 93005042
Start: 252608
End: 253744
Strand: Reverse
Name: 93005042
Synonym: Pcryo_0211
Alternate gene names: NA
Gene position: 253744-252608 (Counterclockwise)
Preceding gene: 93005043
Following gene: 93005041
Centisome position: 8.29
GC content: 32.19
Gene sequence:
>1137_bases ATGAATTCAACTAAAAACAGTGTACTACCTACTTTACGAGGGTTTCACTATCAGATTTTACTTGGTATTAAAAAGTGTTT TGAGTTGAATGAAGGTCAGTCAATTTGGTTTGAAAGTGATGGTGATATAAGTATACGTGGCAATGAATTAGAAAATAATG AACAAATAGAAAGTAAACATTACGATCAAACGGACTTTCTTACTGACGGTCACGCTAATTTTTGGAATACACTGAATAAT TGGCTTAAAGATGATTTTGATCATACACAGTATGCTTTTTTAATTCTTCATACAACTCAGCCTACATCAAAAACAAGCCA ACTCAATGGTTGGAACTCCAAAACTCCTGATGAAAAACTAGCTATCATAAGAAGTATTTATGATAAAAGAACTGGTGCCG AAAAAATAAAGAAAGACGCTAAAGGTGTTTTGAAATTTCAGCAAATTATCTTTAGTGATTCTAATAGTGCAAGAATCAAA GATATATTAGGTAAGATGCTAATTAATGACAGCGCAGATGATATAGATAGTTTGAAGATGAAACTAATTAACAAACTAGT GGGGATTCCTGATGATAATATAGATCAATACTTCGAAGGGATTGTTGGTTGGGTTTACGAAAAAATGGATAAAGATAGCT GGTTCATAAATCAGCATGATTTTAAAGATAGGCTTGAAGACTTAACGAGTAAATATAGTAGAGGAAAGTTTTCTTTTCCT CCCTTTACTGGAGCACTAGCAACAGACGTTGACTTATTAAAGCATAATGAATCACTTTTCGTTCAAAAGATAAAAGATAT AGAGCATTATGACGAAATTCCTGAAGCTGTAGGAAACTACGCTGAATTTACGAATACCTTATTGGATGAGTCAGTACGAT CACCTAAATATAGAGAAATAACTAAAACATATAAGAGTGATTTGATAAGGAAATTTAAAAGGAAATATCAAAATGCTTCG CTTTTATATCCAAATCACCCAAGGATAGATTGTGCAAAAATTCTATATAATGAGTTCATTGACGAGCCAGCAGAACAAGT TCAAGAGTGTGAAATGACTCCAAAACCATATAAAAACGGCTTAATTCATAACTCTATGGATGATGAAAATGATGAGTTAA AATGGGAGATAGACTAA
Upstream 100 bases:
>100_bases ACTATAAGTTAGTCTAAACATTAGTTGTAAAGTATGACATCTAAGTGCTAAGCTTAATTTCATCTAAAACTTATGATTTA AATTTAAACGCGGTATCATA
Downstream 100 bases:
>100_bases GTGGATATGATTGACGCCGTTCACACCTACTACTACAACCCCTTCAAGTATGGAAGTCACATTGTATCATTCTACAACTC ATTGGAAGAAGTAGAGCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MNSTKNSVLPTLRGFHYQILLGIKKCFELNEGQSIWFESDGDISIRGNELENNEQIESKHYDQTDFLTDGHANFWNTLNN WLKDDFDHTQYAFLILHTTQPTSKTSQLNGWNSKTPDEKLAIIRSIYDKRTGAEKIKKDAKGVLKFQQIIFSDSNSARIK DILGKMLINDSADDIDSLKMKLINKLVGIPDDNIDQYFEGIVGWVYEKMDKDSWFINQHDFKDRLEDLTSKYSRGKFSFP PFTGALATDVDLLKHNESLFVQKIKDIEHYDEIPEAVGNYAEFTNTLLDESVRSPKYREITKTYKSDLIRKFKRKYQNAS LLYPNHPRIDCAKILYNEFIDEPAEQVQECEMTPKPYKNGLIHNSMDDENDELKWEID
Sequences:
>Translated_378_residues MNSTKNSVLPTLRGFHYQILLGIKKCFELNEGQSIWFESDGDISIRGNELENNEQIESKHYDQTDFLTDGHANFWNTLNN WLKDDFDHTQYAFLILHTTQPTSKTSQLNGWNSKTPDEKLAIIRSIYDKRTGAEKIKKDAKGVLKFQQIIFSDSNSARIK DILGKMLINDSADDIDSLKMKLINKLVGIPDDNIDQYFEGIVGWVYEKMDKDSWFINQHDFKDRLEDLTSKYSRGKFSFP PFTGALATDVDLLKHNESLFVQKIKDIEHYDEIPEAVGNYAEFTNTLLDESVRSPKYREITKTYKSDLIRKFKRKYQNAS LLYPNHPRIDCAKILYNEFIDEPAEQVQECEMTPKPYKNGLIHNSMDDENDELKWEID >Mature_378_residues MNSTKNSVLPTLRGFHYQILLGIKKCFELNEGQSIWFESDGDISIRGNELENNEQIESKHYDQTDFLTDGHANFWNTLNN WLKDDFDHTQYAFLILHTTQPTSKTSQLNGWNSKTPDEKLAIIRSIYDKRTGAEKIKKDAKGVLKFQQIIFSDSNSARIK DILGKMLINDSADDIDSLKMKLINKLVGIPDDNIDQYFEGIVGWVYEKMDKDSWFINQHDFKDRLEDLTSKYSRGKFSFP PFTGALATDVDLLKHNESLFVQKIKDIEHYDEIPEAVGNYAEFTNTLLDESVRSPKYREITKTYKSDLIRKFKRKYQNAS LLYPNHPRIDCAKILYNEFIDEPAEQVQECEMTPKPYKNGLIHNSMDDENDELKWEID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44057; Mature: 44057
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSTKNSVLPTLRGFHYQILLGIKKCFELNEGQSIWFESDGDISIRGNELENNEQIESKH CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEECCCCCCCHHHHHHC YDQTDFLTDGHANFWNTLNNWLKDDFDHTQYAFLILHTTQPTSKTSQLNGWNSKTPDEKL CCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHCCCCCCCCCHHHH AIIRSIYDKRTGAEKIKKDAKGVLKFQQIIFSDSNSARIKDILGKMLINDSADDIDSLKM HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHH KLINKLVGIPDDNIDQYFEGIVGWVYEKMDKDSWFINQHDFKDRLEDLTSKYSRGKFSFP HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHCCCCCCC PFTGALATDVDLLKHNESLFVQKIKDIEHYDEIPEAVGNYAEFTNTLLDESVRSPKYREI CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH TKTYKSDLIRKFKRKYQNASLLYPNHPRIDCAKILYNEFIDEPAEQVQECEMTPKPYKNG HHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHCC LIHNSMDDENDELKWEID CCCCCCCCCCCCEEEECC >Mature Secondary Structure MNSTKNSVLPTLRGFHYQILLGIKKCFELNEGQSIWFESDGDISIRGNELENNEQIESKH CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEECCCCCCCHHHHHHC YDQTDFLTDGHANFWNTLNNWLKDDFDHTQYAFLILHTTQPTSKTSQLNGWNSKTPDEKL CCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHCCCCCCCCCHHHH AIIRSIYDKRTGAEKIKKDAKGVLKFQQIIFSDSNSARIKDILGKMLINDSADDIDSLKM HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHH KLINKLVGIPDDNIDQYFEGIVGWVYEKMDKDSWFINQHDFKDRLEDLTSKYSRGKFSFP HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHCCCCCCC PFTGALATDVDLLKHNESLFVQKIKDIEHYDEIPEAVGNYAEFTNTLLDESVRSPKYREI CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH TKTYKSDLIRKFKRKYQNASLLYPNHPRIDCAKILYNEFIDEPAEQVQECEMTPKPYKNG HHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHCC LIHNSMDDENDELKWEID CCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA