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The map label for this gene is fadH [H]

Identifier: 93005025

GI number: 93005025

Start: 228195

End: 230330

Strand: Direct

Name: fadH [H]

Synonym: Pcryo_0194

Alternate gene names: 93005025

Gene position: 228195-230330 (Clockwise)

Preceding gene: 93005023

Following gene: 93005026

Centisome position: 7.46

GC content: 47.89

Gene sequence:

>2136_bases
ATGTCCGCCAGCCGTACTGCCAATTTTATTGAGACCGCCAGCACTAATGCACACTACCCACATTTATTTGAGCCATTAGA
TTTGGGCTTTACCACGCTTAAAAACCGCATGGTGATGGGTTCGATGCATACGGGGCTTGAAGACCGTTTTTATAACTACG
GTAAACTGGCAGCATATTTTGCCGAACGTGCCAAAGGCGGCGTAGCGATGATGATTACGGGCGGTATTTCGCCCAATCGT
GAAGGGTGGTTACTGCCTGCTGGTGGCACCATGAATACGCGTGCTGACGTGATTAACCATCAACGCGTGACCCGTGCTGC
GCATAAGTATGACAGCAAAATAATCATGCAAATCTTGCACAGTGGTCGGTACGGCTATCATCCATTTGCCGTCTCATCAA
GTCCGATTAAGTCACCAATCTCACCGTTTAAACCACGTAAGATGAGCATCAAAAACATTGAGCGGACGGTAAAAGATTAT
GCCCGTTCGGCTAAACTTGCCAAGCAAGCTGGTTATGACGGTGTGGAGATCATGGGCTCAGAAGGCTATTTGCTGAATCA
GTTTTTATCCCGTCATGTGAATAAGCGTACTGATGAATATGGCGGTGATATTCAAAATCGCATGAAGTTTGCGGTCGACG
TGGTCAAAGCCGTACGCGAAGCTGCCGGTGAAGATTTTATTATCTTATTCCGCTTGTCAGTGATCGATTTGGTCAAAGAC
GGTAACGTCATGGATGAAGTCATCACCGTTGCCAAAGCGCTAGAAGAAGCTGGCGTGACCATCATGAATACCGGTATCGG
CTGGCATGAAGCGCGCGTACCAACGATTGTCACCAGTGTGCCGCGTGCGGCCTTTGTTGATTTCACTGCTGAAATTAAAA
AGCATATCAGTATTCCAATGATGGCGGCAAACCGTATCAATATGCCAGAAACGGCAGAAGACATCGTCGCTAGTGGTCAA
GCAGATATGATTCAGATGGCGCGTCCGTTCCTAGCTGATGCCCATTGGGTGAATAAAGCTAAAAATGGTCAGGCAGATCG
TATTAATACCTGTATTGCCTGTAACCAAGCTTGTCTTGACCATACCTTTGAGAATAAGCGCTCAACCTGTTTGGTCAATC
CACAAGCCTGCTATGAGACAGAATTGGTTTATAAGAAAACCAAAAAACCGAAAAAAGTAGCGGTCATCGGTGGTGGTGTC
GCTGGTATGTCAGCCGCTCATGTTGCCGCGCTACGTGGTCATGATGTAACCTTATTTGAAGCAAAAGACATCTTGGGCGG
GCAGTTTAACTATGCCAAGGTCATCCCTGGCAAAGAAGAATTCTTTGAGACCATTCGCTACTATATCAATGAGCTCGAGC
ACTTAGGTGTTGAGATCAAACTCAATACCAAAGTCGATAAAGCCATGCTTGAGAAAGCCAAGTTCCATCATGTTATCGTC
GCAACTGGTGTTGTTCCACGAAGCCTCGCTGGTAAGCTGGAAGGCGCGGATTTGCCACAAGTAATGAGCTATGCTGAATT
GCTCTCTGGTGAAAAATCAGTCGGTGATACGGTTGCCGTTATTGGCGCGGGTGGTATCGGTTTTGACGTTAGTGAATATT
TGACCGCCAAACATGGTCAGCCGCTTGATGAGCTAGGGCCTGAATTGCTCAAAGACCCAAGCTATCGTCCAAAAGCCCAG
TCTATTGAAGAGTGGCGTGAAGAATGGGGCGTCACCTCTGCGACTGACTATCAAACCGAGGGCGGACTAATCAAGCCTGA
AGCCATTAAGCCTATCCGCCAAGTGTACTTGATGCAGCGTACCAAAGGTCGCTTGGGTAGTGGTCTCAATAAAACCTCTG
GCTGGGTACATCGTGCTCATGTCAAATCACACGGCGTCATCCAAGTATCAGGTGCGAAGTACGATAAAATCACCAATGAA
GGTATTTGGATCACCAATAACCAAGGTCAAAGCCAGTTACTACGTGTCGATAGCGTCGTCGTTTGTGCTGGTCAAGAGTC
GGTCGTTGAGCTGATGCCAAACGTTGGTGATGCGCCAGATGCACAGTATCATCTCATTGGTGGGGCAAAACTGGCGGCTG
AGCTGGATGCTAAACGTGCGATTCGTGATGGGGCTGAGGTTGCGGCAGCGATTTAA

Upstream 100 bases:

>100_bases
ACGATACCGTAACGCTAAGTCCTATAGCACGAGCAATATAAGCACTCTTACAAAACATTCCTAAAAAATATTCTCATAAA
CCATTCATAAGGAAAATGAT

Downstream 100 bases:

>100_bases
GGTCTAGTTAAAAGTCAGAAATTAAGAAACGGTAGGGAAGAGATTTCCTACCGTTTTTTATGGTTCAATTTATAATATTC
AATATTTCTATAGTGTGAAT

Product: NADH:flavin oxidoreductase/NADH oxidase

Products: NA

Alternate protein names: 2,4-dienoyl coenzyme A reductase [H]

Number of amino acids: Translated: 711; Mature: 710

Protein sequence:

>711_residues
MSASRTANFIETASTNAHYPHLFEPLDLGFTTLKNRMVMGSMHTGLEDRFYNYGKLAAYFAERAKGGVAMMITGGISPNR
EGWLLPAGGTMNTRADVINHQRVTRAAHKYDSKIIMQILHSGRYGYHPFAVSSSPIKSPISPFKPRKMSIKNIERTVKDY
ARSAKLAKQAGYDGVEIMGSEGYLLNQFLSRHVNKRTDEYGGDIQNRMKFAVDVVKAVREAAGEDFIILFRLSVIDLVKD
GNVMDEVITVAKALEEAGVTIMNTGIGWHEARVPTIVTSVPRAAFVDFTAEIKKHISIPMMAANRINMPETAEDIVASGQ
ADMIQMARPFLADAHWVNKAKNGQADRINTCIACNQACLDHTFENKRSTCLVNPQACYETELVYKKTKKPKKVAVIGGGV
AGMSAAHVAALRGHDVTLFEAKDILGGQFNYAKVIPGKEEFFETIRYYINELEHLGVEIKLNTKVDKAMLEKAKFHHVIV
ATGVVPRSLAGKLEGADLPQVMSYAELLSGEKSVGDTVAVIGAGGIGFDVSEYLTAKHGQPLDELGPELLKDPSYRPKAQ
SIEEWREEWGVTSATDYQTEGGLIKPEAIKPIRQVYLMQRTKGRLGSGLNKTSGWVHRAHVKSHGVIQVSGAKYDKITNE
GIWITNNQGQSQLLRVDSVVVCAGQESVVELMPNVGDAPDAQYHLIGGAKLAAELDAKRAIRDGAEVAAAI

Sequences:

>Translated_711_residues
MSASRTANFIETASTNAHYPHLFEPLDLGFTTLKNRMVMGSMHTGLEDRFYNYGKLAAYFAERAKGGVAMMITGGISPNR
EGWLLPAGGTMNTRADVINHQRVTRAAHKYDSKIIMQILHSGRYGYHPFAVSSSPIKSPISPFKPRKMSIKNIERTVKDY
ARSAKLAKQAGYDGVEIMGSEGYLLNQFLSRHVNKRTDEYGGDIQNRMKFAVDVVKAVREAAGEDFIILFRLSVIDLVKD
GNVMDEVITVAKALEEAGVTIMNTGIGWHEARVPTIVTSVPRAAFVDFTAEIKKHISIPMMAANRINMPETAEDIVASGQ
ADMIQMARPFLADAHWVNKAKNGQADRINTCIACNQACLDHTFENKRSTCLVNPQACYETELVYKKTKKPKKVAVIGGGV
AGMSAAHVAALRGHDVTLFEAKDILGGQFNYAKVIPGKEEFFETIRYYINELEHLGVEIKLNTKVDKAMLEKAKFHHVIV
ATGVVPRSLAGKLEGADLPQVMSYAELLSGEKSVGDTVAVIGAGGIGFDVSEYLTAKHGQPLDELGPELLKDPSYRPKAQ
SIEEWREEWGVTSATDYQTEGGLIKPEAIKPIRQVYLMQRTKGRLGSGLNKTSGWVHRAHVKSHGVIQVSGAKYDKITNE
GIWITNNQGQSQLLRVDSVVVCAGQESVVELMPNVGDAPDAQYHLIGGAKLAAELDAKRAIRDGAEVAAAI
>Mature_710_residues
SASRTANFIETASTNAHYPHLFEPLDLGFTTLKNRMVMGSMHTGLEDRFYNYGKLAAYFAERAKGGVAMMITGGISPNRE
GWLLPAGGTMNTRADVINHQRVTRAAHKYDSKIIMQILHSGRYGYHPFAVSSSPIKSPISPFKPRKMSIKNIERTVKDYA
RSAKLAKQAGYDGVEIMGSEGYLLNQFLSRHVNKRTDEYGGDIQNRMKFAVDVVKAVREAAGEDFIILFRLSVIDLVKDG
NVMDEVITVAKALEEAGVTIMNTGIGWHEARVPTIVTSVPRAAFVDFTAEIKKHISIPMMAANRINMPETAEDIVASGQA
DMIQMARPFLADAHWVNKAKNGQADRINTCIACNQACLDHTFENKRSTCLVNPQACYETELVYKKTKKPKKVAVIGGGVA
GMSAAHVAALRGHDVTLFEAKDILGGQFNYAKVIPGKEEFFETIRYYINELEHLGVEIKLNTKVDKAMLEKAKFHHVIVA
TGVVPRSLAGKLEGADLPQVMSYAELLSGEKSVGDTVAVIGAGGIGFDVSEYLTAKHGQPLDELGPELLKDPSYRPKAQS
IEEWREEWGVTSATDYQTEGGLIKPEAIKPIRQVYLMQRTKGRLGSGLNKTSGWVHRAHVKSHGVIQVSGAKYDKITNEG
IWITNNQGQSQLLRVDSVVVCAGQESVVELMPNVGDAPDAQYHLIGGAKLAAELDAKRAIRDGAEVAAAI

Specific function: Catalyzes the NADP-dependent reduction of 2,4-dienoyl- CoA to yield trans-2- enoyl-CoA [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789463, Length=696, Percent_Identity=48.4195402298851, Blast_Score=673, Evalue=0.0,
Organism=Escherichia coli, GI1787939, Length=345, Percent_Identity=24.3478260869565, Blast_Score=97, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17564188, Length=218, Percent_Identity=28.4403669724771, Blast_Score=90, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI17559804, Length=219, Percent_Identity=29.2237442922374, Blast_Score=89, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17565138, Length=174, Percent_Identity=29.3103448275862, Blast_Score=88, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17559802, Length=169, Percent_Identity=28.9940828402367, Blast_Score=83, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI72001454, Length=219, Percent_Identity=27.8538812785388, Blast_Score=82, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17566914, Length=160, Percent_Identity=33.125, Blast_Score=81, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17540738, Length=342, Percent_Identity=25.7309941520468, Blast_Score=78, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6325086, Length=238, Percent_Identity=32.3529411764706, Blast_Score=95, Evalue=5e-20,
Organism=Saccharomyces cerevisiae, GI6321973, Length=240, Percent_Identity=31.6666666666667, Blast_Score=89, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR013027
- InterPro:   IPR001155 [H]

Pfam domain/function: PF00724 Oxidored_FMN; PF07992 Pyr_redox_2 [H]

EC number: =1.3.1.34 [H]

Molecular weight: Translated: 77841; Mature: 77710

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASRTANFIETASTNAHYPHLFEPLDLGFTTLKNRMVMGSMHTGLEDRFYNYGKLAAYF
CCCCCCCHHHHHCCCCCCCCCCCCHHHCCHHHHHHHHEECHHHCCHHHHHHCHHHHHHHH
AERAKGGVAMMITGGISPNREGWLLPAGGTMNTRADVINHQRVTRAAHKYDSKIIMQILH
HHHCCCCEEEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGRYGYHPFAVSSSPIKSPISPFKPRKMSIKNIERTVKDYARSAKLAKQAGYDGVEIMGS
CCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC
EGYLLNQFLSRHVNKRTDEYGGDIQNRMKFAVDVVKAVREAAGEDFIILFRLSVIDLVKD
CCHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHCC
GNVMDEVITVAKALEEAGVTIMNTGIGWHEARVPTIVTSVPRAAFVDFTAEIKKHISIPM
CCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCE
MAANRINMPETAEDIVASGQADMIQMARPFLADAHWVNKAKNGQADRINTCIACNQACLD
EECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
HTFENKRSTCLVNPQACYETELVYKKTKKPKKVAVIGGGVAGMSAAHVAALRGHDVTLFE
HHHCCCCCEEEECCHHHHHHHHHHHHCCCCCEEEEEECCHHCCHHHHHHHHCCCCEEEEE
AKDILGGQFNYAKVIPGKEEFFETIRYYINELEHLGVEIKLNTKVDKAMLEKAKFHHVIV
HHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHCEEEE
ATGVVPRSLAGKLEGADLPQVMSYAELLSGEKSVGDTVAVIGAGGIGFDVSEYLTAKHGQ
ECCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCC
PLDELGPELLKDPSYRPKAQSIEEWREEWGVTSATDYQTEGGLIKPEAIKPIRQVYLMQR
CHHHCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEECHHHHHHHHHHHHHHH
TKGRLGSGLNKTSGWVHRAHVKSHGVIQVSGAKYDKITNEGIWITNNQGQSQLLRVDSVV
HHHHHCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCEEEECCCCHHHHEEECEEE
VCAGQESVVELMPNVGDAPDAQYHLIGGAKLAAELDAKRAIRDGAEVAAAI
EECCCHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCHHHHHCC
>Mature Secondary Structure 
SASRTANFIETASTNAHYPHLFEPLDLGFTTLKNRMVMGSMHTGLEDRFYNYGKLAAYF
CCCCCCHHHHHCCCCCCCCCCCCHHHCCHHHHHHHHEECHHHCCHHHHHHCHHHHHHHH
AERAKGGVAMMITGGISPNREGWLLPAGGTMNTRADVINHQRVTRAAHKYDSKIIMQILH
HHHCCCCEEEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGRYGYHPFAVSSSPIKSPISPFKPRKMSIKNIERTVKDYARSAKLAKQAGYDGVEIMGS
CCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC
EGYLLNQFLSRHVNKRTDEYGGDIQNRMKFAVDVVKAVREAAGEDFIILFRLSVIDLVKD
CCHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHCC
GNVMDEVITVAKALEEAGVTIMNTGIGWHEARVPTIVTSVPRAAFVDFTAEIKKHISIPM
CCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCE
MAANRINMPETAEDIVASGQADMIQMARPFLADAHWVNKAKNGQADRINTCIACNQACLD
EECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
HTFENKRSTCLVNPQACYETELVYKKTKKPKKVAVIGGGVAGMSAAHVAALRGHDVTLFE
HHHCCCCCEEEECCHHHHHHHHHHHHCCCCCEEEEEECCHHCCHHHHHHHHCCCCEEEEE
AKDILGGQFNYAKVIPGKEEFFETIRYYINELEHLGVEIKLNTKVDKAMLEKAKFHHVIV
HHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHCEEEE
ATGVVPRSLAGKLEGADLPQVMSYAELLSGEKSVGDTVAVIGAGGIGFDVSEYLTAKHGQ
ECCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCC
PLDELGPELLKDPSYRPKAQSIEEWREEWGVTSATDYQTEGGLIKPEAIKPIRQVYLMQR
CHHHCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEECHHHHHHHHHHHHHHH
TKGRLGSGLNKTSGWVHRAHVKSHGVIQVSGAKYDKITNEGIWITNNQGQSQLLRVDSVV
HHHHHCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCEEEECCCCHHHHEEECEEE
VCAGQESVVELMPNVGDAPDAQYHLIGGAKLAAELDAKRAIRDGAEVAAAI
EECCCHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9346310; 9278503 [H]