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The map label for this gene is yjjK [H]

Identifier: 93004975

GI number: 93004975

Start: 168563

End: 170224

Strand: Direct

Name: yjjK [H]

Synonym: Pcryo_0144

Alternate gene names: 93004975

Gene position: 168563-170224 (Clockwise)

Preceding gene: 93004970

Following gene: 93004977

Centisome position: 5.51

GC content: 45.07

Gene sequence:

>1662_bases
ATGGCTCAATATATTTACACGATGAACAACGTGTCAAAACTTGTTCCACCTAAGCGTGAAATCTTAAAGAACATCAACCT
ATCGTTTTTCCCTGGCGCCAAAATTGGTGTTTTGGGTATCAATGGTTCAGGTAAATCAACCTTGCTACGCATCATGGCGG
GCGTGGATACTGAATTTAGTGGTGAAGCTCGTGCGCAAACGGGTACCAAAATTGGTTATTTGCCGCAGGAACCGCAGCTC
GATGACAGCAAAGATGTCCGTGGTAACGTCGAAGACGGTATGCGTGAGGCGTTAGATGCGCTTGCTCGTCTTGATGCCAT
TTATGCGGAATATGCTGAACCTGATGCTGATTTTGACAAGCTTGCTGAAGAACAAGGTAAGATGGAAGACATCATCCAAG
CATGGGATGCGCATAACTTAAATACCCAGCTTGAAAAAGCGGCTGATGCACTTCGTCTGCCACCTTGGGATGCGGATGTC
AGTAAACTGTCTGGTGGTGAAAAACGCCGTGTGGCACTATGTCGTTTGCTCTTATCACGCCCTGATATGTTATTACTTGA
CGAACCAACCAACCATTTGGACGCTGAGTCCGTGGCATGGTTAGAGCAGTTCCTGCAGAACTATAGCGGTACTATCGTTG
CCATTACCCATGACCGTTATTTCTTGGATAATGTCGCTCAGTGGATTTTGGAGCTTGACCGCGGTCATGGCTATCCGTAT
GAAGGCAACTATACTGAGTGGCTAGAGCAAAAGAACACTCGTCTAGAGCAGCAGAATAAGCAAGAAGAATCGTTTGCTAA
AGCGTTGAAAAAAGAGCTGGATTGGATTCGTAAAAACCAAAAAGGTCAACAAGCTAAGTCCAAATCTCGCGTGCAGCGTT
TTGAAGAATTGAACTCACAAGAGTTCCAGAAGCGTAATGAGACCTCTGAGATTTATATTCCACCGGGTCCTCGTTTGGGT
AATAAAGTCATCGAAGTCAACGATATCTCCAAGTCATTTGGTGACCGTTTACTTTATGAAAACCTTAGCTTTAACGTCCC
AGCTGGTGCCATTGTTGGTATTATTGGCCCAAATGGTGCGGGTAAAACCACCCTATTTAACATGATTACCGAACGCGATA
CGCCAGATACAGGCTCAGTCGATTTAGGTGAAAGTGTCAAAGTTGCTTATGTTGGTCAGGTACGCGACAATTTAGATGAC
AGCAAAACGGTTTGGGAAGAAATCTCTGACGGGCTTGATATTATTACCGTTGGCGACTATACGACGCCAAGCCGCGCTTA
TATTGGTCGCTTTAACTTCAAAGGTTCAGACCAGCAAAAGCACGTCGGTCAATTGTCTGGTGGTGAGCGTAACCGCTTGC
AGTTAGCTAAGACCTTGAAGCAAGGCGCAAACGTATTGCTCCTTGATGAACCATCAAACGATTTGGACATCGAAACCTTA
CGTGCGTTAGAAGATGCGATTCAGGTCTTCCCAGGTACTGTCATGGTCGTATCGCATGATCGATGGTTCCTTGACCGTAT
CGCGACTCATATCTTGGCGTTTGAAGATGAAGGTCCAGTTTGGTTCGATGGTAACTATTCTGAGTTTGAAACGTATCGTA
AAAAGACGATGGGTGATGATGCCAATCCTAAGCGTATGAAGTATAAAAAGATTTCAACTTAA

Upstream 100 bases:

>100_bases
ATGACAGTCAATGAATACCCCTGATTTTGAGGTGCAGCTTACTTGGTAGTATTGCTAAGTCTGTTTGTTTGCCTCTTTTA
TGCAGTCTATCGGAGTGTTA

Downstream 100 bases:

>100_bases
GATAGCTACTCAGAAATTTCAAATGTAAAGTAATAAAAAGACCTCTAATTATTAGAGGTCTTTTTTATGCATCATAGAAT
TGATTAAAAGTTAACGCTTA

Product: putative ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 553; Mature: 552

Protein sequence:

>553_residues
MAQYIYTMNNVSKLVPPKREILKNINLSFFPGAKIGVLGINGSGKSTLLRIMAGVDTEFSGEARAQTGTKIGYLPQEPQL
DDSKDVRGNVEDGMREALDALARLDAIYAEYAEPDADFDKLAEEQGKMEDIIQAWDAHNLNTQLEKAADALRLPPWDADV
SKLSGGEKRRVALCRLLLSRPDMLLLDEPTNHLDAESVAWLEQFLQNYSGTIVAITHDRYFLDNVAQWILELDRGHGYPY
EGNYTEWLEQKNTRLEQQNKQEESFAKALKKELDWIRKNQKGQQAKSKSRVQRFEELNSQEFQKRNETSEIYIPPGPRLG
NKVIEVNDISKSFGDRLLYENLSFNVPAGAIVGIIGPNGAGKTTLFNMITERDTPDTGSVDLGESVKVAYVGQVRDNLDD
SKTVWEEISDGLDIITVGDYTTPSRAYIGRFNFKGSDQQKHVGQLSGGERNRLQLAKTLKQGANVLLLDEPSNDLDIETL
RALEDAIQVFPGTVMVVSHDRWFLDRIATHILAFEDEGPVWFDGNYSEFETYRKKTMGDDANPKRMKYKKIST

Sequences:

>Translated_553_residues
MAQYIYTMNNVSKLVPPKREILKNINLSFFPGAKIGVLGINGSGKSTLLRIMAGVDTEFSGEARAQTGTKIGYLPQEPQL
DDSKDVRGNVEDGMREALDALARLDAIYAEYAEPDADFDKLAEEQGKMEDIIQAWDAHNLNTQLEKAADALRLPPWDADV
SKLSGGEKRRVALCRLLLSRPDMLLLDEPTNHLDAESVAWLEQFLQNYSGTIVAITHDRYFLDNVAQWILELDRGHGYPY
EGNYTEWLEQKNTRLEQQNKQEESFAKALKKELDWIRKNQKGQQAKSKSRVQRFEELNSQEFQKRNETSEIYIPPGPRLG
NKVIEVNDISKSFGDRLLYENLSFNVPAGAIVGIIGPNGAGKTTLFNMITERDTPDTGSVDLGESVKVAYVGQVRDNLDD
SKTVWEEISDGLDIITVGDYTTPSRAYIGRFNFKGSDQQKHVGQLSGGERNRLQLAKTLKQGANVLLLDEPSNDLDIETL
RALEDAIQVFPGTVMVVSHDRWFLDRIATHILAFEDEGPVWFDGNYSEFETYRKKTMGDDANPKRMKYKKIST
>Mature_552_residues
AQYIYTMNNVSKLVPPKREILKNINLSFFPGAKIGVLGINGSGKSTLLRIMAGVDTEFSGEARAQTGTKIGYLPQEPQLD
DSKDVRGNVEDGMREALDALARLDAIYAEYAEPDADFDKLAEEQGKMEDIIQAWDAHNLNTQLEKAADALRLPPWDADVS
KLSGGEKRRVALCRLLLSRPDMLLLDEPTNHLDAESVAWLEQFLQNYSGTIVAITHDRYFLDNVAQWILELDRGHGYPYE
GNYTEWLEQKNTRLEQQNKQEESFAKALKKELDWIRKNQKGQQAKSKSRVQRFEELNSQEFQKRNETSEIYIPPGPRLGN
KVIEVNDISKSFGDRLLYENLSFNVPAGAIVGIIGPNGAGKTTLFNMITERDTPDTGSVDLGESVKVAYVGQVRDNLDDS
KTVWEEISDGLDIITVGDYTTPSRAYIGRFNFKGSDQQKHVGQLSGGERNRLQLAKTLKQGANVLLLDEPSNDLDIETLR
ALEDAIQVFPGTVMVVSHDRWFLDRIATHILAFEDEGPVWFDGNYSEFETYRKKTMGDDANPKRMKYKKIST

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI10947137, Length=536, Percent_Identity=29.2910447761194, Blast_Score=196, Evalue=3e-50,
Organism=Homo sapiens, GI27881506, Length=536, Percent_Identity=29.2910447761194, Blast_Score=196, Evalue=4e-50,
Organism=Homo sapiens, GI148612853, Length=520, Percent_Identity=27.5, Blast_Score=189, Evalue=8e-48,
Organism=Homo sapiens, GI10947135, Length=535, Percent_Identity=28.0373831775701, Blast_Score=169, Evalue=8e-42,
Organism=Homo sapiens, GI69354671, Length=392, Percent_Identity=30.6122448979592, Blast_Score=165, Evalue=1e-40,
Organism=Homo sapiens, GI42741659, Length=257, Percent_Identity=25.6809338521401, Blast_Score=66, Evalue=7e-11,
Organism=Escherichia coli, GI2367384, Length=554, Percent_Identity=68.0505415162455, Blast_Score=810, Evalue=0.0,
Organism=Escherichia coli, GI1787182, Length=514, Percent_Identity=34.4357976653696, Blast_Score=267, Evalue=1e-72,
Organism=Escherichia coli, GI1789751, Length=548, Percent_Identity=31.9343065693431, Blast_Score=234, Evalue=2e-62,
Organism=Escherichia coli, GI1787041, Length=519, Percent_Identity=30.4431599229287, Blast_Score=233, Evalue=3e-62,
Organism=Escherichia coli, GI87081782, Length=572, Percent_Identity=25.3496503496504, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI48994943, Length=484, Percent_Identity=24.1735537190083, Blast_Score=92, Evalue=7e-20,
Organism=Escherichia coli, GI1788225, Length=226, Percent_Identity=27.4336283185841, Blast_Score=83, Evalue=4e-17,
Organism=Escherichia coli, GI87081709, Length=193, Percent_Identity=28.4974093264249, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1788761, Length=199, Percent_Identity=29.6482412060301, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1787164, Length=206, Percent_Identity=28.6407766990291, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1788165, Length=182, Percent_Identity=30.2197802197802, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1788450, Length=219, Percent_Identity=29.2237442922374, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1786345, Length=218, Percent_Identity=30.2752293577982, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1786398, Length=212, Percent_Identity=29.2452830188679, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1789891, Length=222, Percent_Identity=25.2252252252252, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1786563, Length=190, Percent_Identity=24.7368421052632, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI1786698, Length=194, Percent_Identity=26.2886597938144, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI87081791, Length=195, Percent_Identity=26.1538461538462, Blast_Score=63, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=537, Percent_Identity=26.6294227188082, Blast_Score=194, Evalue=7e-50,
Organism=Caenorhabditis elegans, GI17553372, Length=528, Percent_Identity=29.5454545454545, Blast_Score=194, Evalue=8e-50,
Organism=Caenorhabditis elegans, GI17555318, Length=547, Percent_Identity=26.8738574040219, Blast_Score=194, Evalue=9e-50,
Organism=Caenorhabditis elegans, GI193208177, Length=259, Percent_Identity=27.027027027027, Blast_Score=81, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI115533592, Length=215, Percent_Identity=28.8372093023256, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI193211015, Length=284, Percent_Identity=23.5915492957746, Blast_Score=69, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI193211017, Length=284, Percent_Identity=23.5915492957746, Blast_Score=69, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17511077, Length=218, Percent_Identity=29.3577981651376, Blast_Score=68, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI115535101, Length=216, Percent_Identity=26.8518518518519, Blast_Score=66, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI71992285, Length=242, Percent_Identity=26.8595041322314, Blast_Score=65, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI17567265, Length=203, Percent_Identity=26.1083743842365, Blast_Score=65, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6321121, Length=547, Percent_Identity=29.0676416819013, Blast_Score=202, Evalue=1e-52,
Organism=Saccharomyces cerevisiae, GI6320874, Length=531, Percent_Identity=30.6967984934087, Blast_Score=201, Evalue=2e-52,
Organism=Saccharomyces cerevisiae, GI6323278, Length=388, Percent_Identity=26.8041237113402, Blast_Score=115, Evalue=2e-26,
Organism=Saccharomyces cerevisiae, GI6325030, Length=389, Percent_Identity=27.2493573264781, Blast_Score=114, Evalue=5e-26,
Organism=Saccharomyces cerevisiae, GI6324314, Length=374, Percent_Identity=26.4705882352941, Blast_Score=112, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6320266, Length=378, Percent_Identity=24.3386243386243, Blast_Score=90, Evalue=8e-19,
Organism=Saccharomyces cerevisiae, GI6322980, Length=248, Percent_Identity=25, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24666836, Length=548, Percent_Identity=30.1094890510949, Blast_Score=200, Evalue=2e-51,
Organism=Drosophila melanogaster, GI24642252, Length=556, Percent_Identity=28.2374100719424, Blast_Score=198, Evalue=8e-51,
Organism=Drosophila melanogaster, GI18859989, Length=556, Percent_Identity=28.2374100719424, Blast_Score=198, Evalue=8e-51,
Organism=Drosophila melanogaster, GI24641342, Length=545, Percent_Identity=26.9724770642202, Blast_Score=176, Evalue=3e-44,
Organism=Drosophila melanogaster, GI281363262, Length=246, Percent_Identity=24.7967479674797, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24653245, Length=246, Percent_Identity=24.7967479674797, Blast_Score=72, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022374
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 62340; Mature: 62209

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQYIYTMNNVSKLVPPKREILKNINLSFFPGAKIGVLGINGSGKSTLLRIMAGVDTEFS
CCCEEEEHHHHHHHCCCHHHHHHHCCCEEECCCEEEEEEECCCCHHHHHHHHHCCCCCCC
GEARAQTGTKIGYLPQEPQLDDSKDVRGNVEDGMREALDALARLDAIYAEYAEPDADFDK
CCCHHCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LAEEQGKMEDIIQAWDAHNLNTQLEKAADALRLPPWDADVSKLSGGEKRRVALCRLLLSR
HHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHCC
PDMLLLDEPTNHLDAESVAWLEQFLQNYSGTIVAITHDRYFLDNVAQWILELDRGHGYPY
CCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCC
EGNYTEWLEQKNTRLEQQNKQEESFAKALKKELDWIRKNQKGQQAKSKSRVQRFEELNSQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHH
EFQKRNETSEIYIPPGPRLGNKVIEVNDISKSFGDRLLYENLSFNVPAGAIVGIIGPNGA
HHHHCCCCCEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCC
GKTTLFNMITERDTPDTGSVDLGESVKVAYVGQVRDNLDDSKTVWEEISDGLDIITVGDY
CHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECHHCCCCHHHHHHHHHHCCCEEEEECCC
TTPSRAYIGRFNFKGSDQQKHVGQLSGGERNRLQLAKTLKQGANVLLLDEPSNDLDIETL
CCCCCCEEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHH
RALEDAIQVFPGTVMVVSHDRWFLDRIATHILAFEDEGPVWFDGNYSEFETYRKKTMGDD
HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHEEECCCCCEEECCCHHHHHHHHHHHCCCC
ANPKRMKYKKIST
CCCCCCCCCCCCC
>Mature Secondary Structure 
AQYIYTMNNVSKLVPPKREILKNINLSFFPGAKIGVLGINGSGKSTLLRIMAGVDTEFS
CCEEEEHHHHHHHCCCHHHHHHHCCCEEECCCEEEEEEECCCCHHHHHHHHHCCCCCCC
GEARAQTGTKIGYLPQEPQLDDSKDVRGNVEDGMREALDALARLDAIYAEYAEPDADFDK
CCCHHCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LAEEQGKMEDIIQAWDAHNLNTQLEKAADALRLPPWDADVSKLSGGEKRRVALCRLLLSR
HHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHCC
PDMLLLDEPTNHLDAESVAWLEQFLQNYSGTIVAITHDRYFLDNVAQWILELDRGHGYPY
CCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCC
EGNYTEWLEQKNTRLEQQNKQEESFAKALKKELDWIRKNQKGQQAKSKSRVQRFEELNSQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHH
EFQKRNETSEIYIPPGPRLGNKVIEVNDISKSFGDRLLYENLSFNVPAGAIVGIIGPNGA
HHHHCCCCCEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCC
GKTTLFNMITERDTPDTGSVDLGESVKVAYVGQVRDNLDDSKTVWEEISDGLDIITVGDY
CHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECHHCCCCHHHHHHHHHHCCCEEEEECCC
TTPSRAYIGRFNFKGSDQQKHVGQLSGGERNRLQLAKTLKQGANVLLLDEPSNDLDIETL
CCCCCCEEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHH
RALEDAIQVFPGTVMVVSHDRWFLDRIATHILAFEDEGPVWFDGNYSEFETYRKKTMGDD
HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHEEECCCCCEEECCCHHHHHHHHHHHCCCC
ANPKRMKYKKIST
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]