Click here to switch to the map view.

The map label for this gene is 93004932

Identifier: 93004932

GI number: 93004932

Start: 116921

End: 117406

Strand: Direct

Name: 93004932

Synonym: Pcryo_0101

Alternate gene names: NA

Gene position: 116921-117406 (Clockwise)

Preceding gene: 93004931

Following gene: 93004935

Centisome position: 3.82

GC content: 44.24

Gene sequence:

>486_bases
ATGGAACTTTTCAATCAAACATCTATCATTGATAATTTGGACAATCATTGTCCTGAAGAGCTAGCGCATTATCCTATTAT
CCATCAGCAGCCGATTCATTGGGGTGAAATGGATGCCTTTAATCATCTAAATAATGTGGTGTACTATCGCTACGCTGAGT
CAGCCCGTATTGGCTATTTGCAGGCGCTGGGCATGTTTGATGGCAATATGGTTACGGTATTGGCACAATCAAGCTGCCAG
TATTTGCACCCAGTGATTTTTCCTGATATCTTGTTATTAGGCGTTCGTTGCCAGCGTTTGGGTACCACCAGCATAGTAAT
CGAGTACAGCTATTATAGTAAGGCACAAGCTGCCATCGTTGCGACCGCTGAGGCAGTGATAGTGCGCTTAGAGAGCAATG
GTCAAGATAAAAAGCCATGGACGAATGAGGAGCGTGAACGACTACTAGCTCTAGAAGCAACATTCGGTCATATCCCACAA
CTCTAA

Upstream 100 bases:

>100_bases
AGATTTTAAATAAGCCGCAACGTTAATGCACTACTGATTTATACGATTGTTTTAAAGTGTTATTGTTTTAAAGTATTATA
AAAATAAGAGACAGGCAGTT

Downstream 100 bases:

>100_bases
GTATGATGCTTTGTGATTAAGCTTTGAGAAAATAAGAAAAAAGGCGCATCAATCTAAGCTGATGCGCCTTTTTTATTGAT
AATAAGTTTCTATTAATTAA

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: Thioesterase; Thioesterase Family Protein; Thioesterase Superfamily; Acyl-CoA Thioesterase; Thioesterase Protein; 4-Hydroxybenzoyl-CoA Thioesterase

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MELFNQTSIIDNLDNHCPEELAHYPIIHQQPIHWGEMDAFNHLNNVVYYRYAESARIGYLQALGMFDGNMVTVLAQSSCQ
YLHPVIFPDILLLGVRCQRLGTTSIVIEYSYYSKAQAAIVATAEAVIVRLESNGQDKKPWTNEERERLLALEATFGHIPQ
L

Sequences:

>Translated_161_residues
MELFNQTSIIDNLDNHCPEELAHYPIIHQQPIHWGEMDAFNHLNNVVYYRYAESARIGYLQALGMFDGNMVTVLAQSSCQ
YLHPVIFPDILLLGVRCQRLGTTSIVIEYSYYSKAQAAIVATAEAVIVRLESNGQDKKPWTNEERERLLALEATFGHIPQ
L
>Mature_161_residues
MELFNQTSIIDNLDNHCPEELAHYPIIHQQPIHWGEMDAFNHLNNVVYYRYAESARIGYLQALGMFDGNMVTVLAQSSCQ
YLHPVIFPDILLLGVRCQRLGTTSIVIEYSYYSKAQAAIVATAEAVIVRLESNGQDKKPWTNEERERLLALEATFGHIPQ
L

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18337; Mature: 18337

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELFNQTSIIDNLDNHCPEELAHYPIIHQQPIHWGEMDAFNHLNNVVYYRYAESARIGYL
CCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHCCEEEEEECCCCCHHHH
QALGMFDGNMVTVLAQSSCQYLHPVIFPDILLLGVRCQRLGTTSIVIEYSYYSKAQAAIV
HHHCCCCCCEEEEEECCCCHHHCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHE
ATAEAVIVRLESNGQDKKPWTNEERERLLALEATFGHIPQL
EEEEEEEEEECCCCCCCCCCCCHHHHHEEHEECCCCCCCCC
>Mature Secondary Structure
MELFNQTSIIDNLDNHCPEELAHYPIIHQQPIHWGEMDAFNHLNNVVYYRYAESARIGYL
CCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHCCEEEEEECCCCCHHHH
QALGMFDGNMVTVLAQSSCQYLHPVIFPDILLLGVRCQRLGTTSIVIEYSYYSKAQAAIV
HHHCCCCCCEEEEEECCCCHHHCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHE
ATAEAVIVRLESNGQDKKPWTNEERERLLALEATFGHIPQL
EEEEEEEEEECCCCCCCCCCCCHHHHHEEHEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA