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The map label for this gene is tolR [H]

Identifier: 92113974

GI number: 92113974

Start: 2106145

End: 2106582

Strand: Direct

Name: tolR [H]

Synonym: Csal_1851

Alternate gene names: 92113974

Gene position: 2106145-2106582 (Clockwise)

Preceding gene: 92113973

Following gene: 92113975

Centisome position: 56.97

GC content: 60.73

Gene sequence:

>438_bases
ATGTACGGATCCTATCATCGCCGCCAGCGGCGCAAGCCCATGGGCGAAATCAATGTCGTGCCTTTCATCGACGTGATGCT
GGTACTGCTGGTGATCTTCATGATCACCGCCCCCATGCTCAACCAGGGCGTCAACGTCGAGCTGCCGCAGGTCACGTCCG
AGCCCATCGACACCGACGAGCGGGAGCCGTTGATCGTGTCGGTGGATCGCGAGGGGCAATATTACATCTCGCTGGGTGAC
GAAGAGACGCCGGTCGCGCTCGACAAGCTCGGTGAGCAGGTTACCGCCATGCTGAGTCGTCGTCCCGATACACCGGTCAT
GGTGCGGGGTGACCGCAATGTATCCTATGGTCAGGTCGTGACGCTGATGAGCACATTGCAAGGCGCTGGCGTGGGCAATG
TCGGGCTGATCTCCGAGCCCCCGTCCAGTGAACAGTGA

Upstream 100 bases:

>100_bases
CTTCTCGGCAAATACGAAAACTTCGCCGAGGAATTCCACGCCATCCTGCATCGAAACCTGCAGGGACGCAGCGAACGCGC
GGCATCCTGAGGGAGGAAGC

Downstream 100 bases:

>100_bases
GGAGTCGACATGGCGAAACGTGAACGCCGTGTAGGCTATGGGTGGCCCACGCTACTGGCGATTGGCGTGCATGTCGCGGC
GCTGTTGTTGACCATCATCA

Product: biopolymer transport protein ExbD/TolR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MYGSYHRRQRRKPMGEINVVPFIDVMLVLLVIFMITAPMLNQGVNVELPQVTSEPIDTDEREPLIVSVDREGQYYISLGD
EETPVALDKLGEQVTAMLSRRPDTPVMVRGDRNVSYGQVVTLMSTLQGAGVGNVGLISEPPSSEQ

Sequences:

>Translated_145_residues
MYGSYHRRQRRKPMGEINVVPFIDVMLVLLVIFMITAPMLNQGVNVELPQVTSEPIDTDEREPLIVSVDREGQYYISLGD
EETPVALDKLGEQVTAMLSRRPDTPVMVRGDRNVSYGQVVTLMSTLQGAGVGNVGLISEPPSSEQ
>Mature_145_residues
MYGSYHRRQRRKPMGEINVVPFIDVMLVLLVIFMITAPMLNQGVNVELPQVTSEPIDTDEREPLIVSVDREGQYYISLGD
EETPVALDKLGEQVTAMLSRRPDTPVMVRGDRNVSYGQVVTLMSTLQGAGVGNVGLISEPPSSEQ

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1789380, Length=132, Percent_Identity=37.1212121212121, Blast_Score=84, Evalue=5e-18,
Organism=Escherichia coli, GI1786959, Length=132, Percent_Identity=39.3939393939394, Blast_Score=67, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014168
- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 16047; Mature: 16047

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYGSYHRRQRRKPMGEINVVPFIDVMLVLLVIFMITAPMLNQGVNVELPQVTSEPIDTDE
CCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCC
REPLIVSVDREGQYYISLGDEETPVALDKLGEQVTAMLSRRPDTPVMVRGDRNVSYGQVV
CCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHH
TLMSTLQGAGVGNVGLISEPPSSEQ
HHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MYGSYHRRQRRKPMGEINVVPFIDVMLVLLVIFMITAPMLNQGVNVELPQVTSEPIDTDE
CCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCC
REPLIVSVDREGQYYISLGDEETPVALDKLGEQVTAMLSRRPDTPVMVRGDRNVSYGQVV
CCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHH
TLMSTLQGAGVGNVGLISEPPSSEQ
HHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8955385; 10984043 [H]