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The map label for this gene is etfB [H]

Identifier: 92113737

GI number: 92113737

Start: 1834282

End: 1835034

Strand: Direct

Name: etfB [H]

Synonym: Csal_1613

Alternate gene names: 92113737

Gene position: 1834282-1835034 (Clockwise)

Preceding gene: 92113735

Following gene: 92113738

Centisome position: 49.62

GC content: 63.08

Gene sequence:

>753_bases
ATGAAAGTACTCGTCGCGGTCAAACGCGTCATCGATTACAACGTCAAGATCCGGGTCAAGCCGGACCACTCCGACGTCGA
TCTCACGAACGTCAAGATGGCCATGAACCCATTCTGTGAGATTGCCGTGGAAGAAGCGGTGCGCCTCAAGGAAAAGGGCG
TCGCCAGCGAAGTGGTGGCCGTCACCATCGGCCCCAAGGCCGCGCAGGAACAGCTGCGTACCGCGCTGGCGCTGGGCGCG
GATCGCGCCATCCACATCGAGACCGACGACAAGGTCGAGTCACTGACCGCCGCCAAGCTGCTCAAGCGCGTCGTCGACGA
CGAACAGCCCGGCTTGACGATCCTCGGCAAGCAGTCCATCGATACCGACAACAACCAGACCGGTCAGATGCTGGCCGCGC
TGGCAGGCATGGGACAGGGCACCTTCGCGTCCGAGGTGCAGGTCGAGGGCGACGAGGTCCGCGTGACCCGCGAGATCGAT
GGCGGCCTGCAGACGGTCTCGCTCAAGCTGCCGGCGGTGATCACCACCGACCTGCGCCTCAACGAGCCGCGTTACGCCAA
GCTGCCCGACATCATGAAGGCCAAGAAAAAGCCCATCGACGTGCAGACGCCCGATGCCCTGGGGGTCGCGGTGACCTCCA
GCCTGAACGTGCTCAAGGTGGAATCGCCGGCCGAACGTCAAGGCGGCACCAAGGTGGCGTCCGTGGATGAACTCGTCGAC
AAACTCAAGAACGAAGCCAAGGTGATCGCATGA

Upstream 100 bases:

>100_bases
GTGTAACGGGCGACATTTTTTCGGGACACGCCCCCTATCAAACGCTTGAATGAATTTGTTCTAAGGGCATGCCTGCCGGT
TCTAACCAAGCGAGGACACC

Downstream 100 bases:

>100_bases
GCATTCTGGTAATCGCCGAACATCACAACGGCCAACTGGCCGGCAGCACTGCGCATGTGGTCGCCGCGGCCCAGGCCATC
GGCGGCGACATCGACCTGCT

Product: electron transfer flavoprotein beta-subunit

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MKVLVAVKRVIDYNVKIRVKPDHSDVDLTNVKMAMNPFCEIAVEEAVRLKEKGVASEVVAVTIGPKAAQEQLRTALALGA
DRAIHIETDDKVESLTAAKLLKRVVDDEQPGLTILGKQSIDTDNNQTGQMLAALAGMGQGTFASEVQVEGDEVRVTREID
GGLQTVSLKLPAVITTDLRLNEPRYAKLPDIMKAKKKPIDVQTPDALGVAVTSSLNVLKVESPAERQGGTKVASVDELVD
KLKNEAKVIA

Sequences:

>Translated_250_residues
MKVLVAVKRVIDYNVKIRVKPDHSDVDLTNVKMAMNPFCEIAVEEAVRLKEKGVASEVVAVTIGPKAAQEQLRTALALGA
DRAIHIETDDKVESLTAAKLLKRVVDDEQPGLTILGKQSIDTDNNQTGQMLAALAGMGQGTFASEVQVEGDEVRVTREID
GGLQTVSLKLPAVITTDLRLNEPRYAKLPDIMKAKKKPIDVQTPDALGVAVTSSLNVLKVESPAERQGGTKVASVDELVD
KLKNEAKVIA
>Mature_250_residues
MKVLVAVKRVIDYNVKIRVKPDHSDVDLTNVKMAMNPFCEIAVEEAVRLKEKGVASEVVAVTIGPKAAQEQLRTALALGA
DRAIHIETDDKVESLTAAKLLKRVVDDEQPGLTILGKQSIDTDNNQTGQMLAALAGMGQGTFASEVQVEGDEVRVTREID
GGLQTVSLKLPAVITTDLRLNEPRYAKLPDIMKAKKKPIDVQTPDALGVAVTSSLNVLKVESPAERQGGTKVASVDELVD
KLKNEAKVIA

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=252, Percent_Identity=57.9365079365079, Blast_Score=284, Evalue=5e-77,
Organism=Homo sapiens, GI62420877, Length=237, Percent_Identity=56.1181434599156, Blast_Score=259, Evalue=2e-69,
Organism=Caenorhabditis elegans, GI25141345, Length=255, Percent_Identity=51.3725490196078, Blast_Score=231, Evalue=4e-61,
Organism=Saccharomyces cerevisiae, GI6321646, Length=256, Percent_Identity=44.140625, Blast_Score=192, Evalue=5e-50,
Organism=Drosophila melanogaster, GI24651147, Length=246, Percent_Identity=53.6585365853659, Blast_Score=234, Evalue=5e-62,
Organism=Drosophila melanogaster, GI24651145, Length=246, Percent_Identity=53.6585365853659, Blast_Score=234, Evalue=5e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 26896; Mature: 26896

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLVAVKRVIDYNVKIRVKPDHSDVDLTNVKMAMNPFCEIAVEEAVRLKEKGVASEVVA
CHHHHEEHHHHCCCEEEEECCCCCCCCCEEEHHHHCHHHHHHHHHHHHHHHCCCCCEEEE
VTIGPKAAQEQLRTALALGADRAIHIETDDKVESLTAAKLLKRVVDDEQPGLTILGKQSI
EEECCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCC
DTDNNQTGQMLAALAGMGQGTFASEVQVEGDEVRVTREIDGGLQTVSLKLPAVITTDLRL
CCCCCCHHHHHHHHHCCCCCCCCCEEEECCCEEEEEEECCCCEEEEEEEECEEEEECEEE
NEPRYAKLPDIMKAKKKPIDVQTPDALGVAVTSSLNVLKVESPAERQGGTKVASVDELVD
CCCCCCCCCHHHHHCCCCCCCCCCCCCCEEEECCCEEEEECCCHHHCCCCEEHHHHHHHH
KLKNEAKVIA
HHHHHCCCCC
>Mature Secondary Structure
MKVLVAVKRVIDYNVKIRVKPDHSDVDLTNVKMAMNPFCEIAVEEAVRLKEKGVASEVVA
CHHHHEEHHHHCCCEEEEECCCCCCCCCEEEHHHHCHHHHHHHHHHHHHHHCCCCCEEEE
VTIGPKAAQEQLRTALALGADRAIHIETDDKVESLTAAKLLKRVVDDEQPGLTILGKQSI
EEECCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCC
DTDNNQTGQMLAALAGMGQGTFASEVQVEGDEVRVTREIDGGLQTVSLKLPAVITTDLRL
CCCCCCHHHHHHHHHCCCCCCCCCEEEECCCEEEEEEECCCCEEEEEEEECEEEEECEEE
NEPRYAKLPDIMKAKKKPIDVQTPDALGVAVTSSLNVLKVESPAERQGGTKVASVDELVD
CCCCCCCCCHHHHHCCCCCCCCCCCCCCEEEECCCEEEEECCCHHHCCCCEEHHHHHHHH
KLKNEAKVIA
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]