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The map label for this gene is dppC [H]

Identifier: 92112345

GI number: 92112345

Start: 233634

End: 234482

Strand: Direct

Name: dppC [H]

Synonym: Csal_0210

Alternate gene names: 92112345

Gene position: 233634-234482 (Clockwise)

Preceding gene: 92112344

Following gene: 92112346

Centisome position: 6.32

GC content: 62.66

Gene sequence:

>849_bases
ATGACGGTTCTCAAGGCGTTGCTCAAACGCAAGGCCGTGGCCATCGCCCTGATCTATATCCTGATCGTGGTCGTGGCAGC
GATCTTCGCCCCGTGGCTGGCACCGCACGACCCCGCCGAGCAGTTCTTCGAGGGACTGTCGCTGGAAGGCGCGCCGTTGC
CGCCTGGGGGCGAGTTCTGGCTGGGCACGGATCTGCTGGGACGCGATTTGCTTTCGCGGGTCATCTACGGCGCGCGTACT
TCTTTGATCATTGGCATTGTCTCCAACGGCATCGCGGTGGTAATCGGCACGCTGGTAGGCGTGACTGCTGGCTTCGTGCG
CGGCTGGCTGGGGTCGGTCCTGATGCGCCTGACCGATTTGATGATGGCCTTTCCGGCCTTGTTGCTGGCCATCGCGCTAG
CGGCGATCCTGCAGCCCAGCCTGTGGATCGTGGCGATGGTCATCGCCATGGTGAATTGGGTACAGATCGCGCGCGTCATC
TATTCGGAGACCATCTCGCTGTCGTCGAAGGATTTCGTCGCGGTCGAGCGCACCATCGGCGTCAGCGCGCGGCGCATCCT
GTTCTCGCATCTCCTGCCGCATTTGCTGCCGACCATCCTGGTCTGGGCGACTCTGGGCATCTCCACCACGGTCCTGCTCG
AAGCCACGCTGTCCTTCCTGGGAGTCGGCGTGCAGCCGCCCATGCCGAGCTGGGGCAACATCATCTTCGAGAGCCAGACC
TACTTCATTTCCGCCATGTGGCTGGTGCTGTTTCCCGGCATCGCCATCATCGCGCTGTCACTGAGCTTCAATCTGGTCGG
CGACGCGCTGCGCGACGAGCTCGACCCGACACTCAAAGGAAGACGCTAA

Upstream 100 bases:

>100_bases
GTTTGCGCAGCGATGCCATGTCTCGCCAGCTCACCCTGGTGCAAGCCAGCGAGCGATTGCTGGCGCAGATGGCGCCTGCA
CGGCGTCAGGGAGGGCCGTC

Downstream 100 bases:

>100_bases
TGGTCTGGTATATCGCCAAGCGCATCGCCTATTCGCTGCTCATCCTGCTGGGTGTGACCTTCATCACCTACCTGCTGCTC
TACATGATTCCGGCCGACCC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MTVLKALLKRKAVAIALIYILIVVVAAIFAPWLAPHDPAEQFFEGLSLEGAPLPPGGEFWLGTDLLGRDLLSRVIYGART
SLIIGIVSNGIAVVIGTLVGVTAGFVRGWLGSVLMRLTDLMMAFPALLLAIALAAILQPSLWIVAMVIAMVNWVQIARVI
YSETISLSSKDFVAVERTIGVSARRILFSHLLPHLLPTILVWATLGISTTVLLEATLSFLGVGVQPPMPSWGNIIFESQT
YFISAMWLVLFPGIAIIALSLSFNLVGDALRDELDPTLKGRR

Sequences:

>Translated_282_residues
MTVLKALLKRKAVAIALIYILIVVVAAIFAPWLAPHDPAEQFFEGLSLEGAPLPPGGEFWLGTDLLGRDLLSRVIYGART
SLIIGIVSNGIAVVIGTLVGVTAGFVRGWLGSVLMRLTDLMMAFPALLLAIALAAILQPSLWIVAMVIAMVNWVQIARVI
YSETISLSSKDFVAVERTIGVSARRILFSHLLPHLLPTILVWATLGISTTVLLEATLSFLGVGVQPPMPSWGNIIFESQT
YFISAMWLVLFPGIAIIALSLSFNLVGDALRDELDPTLKGRR
>Mature_281_residues
TVLKALLKRKAVAIALIYILIVVVAAIFAPWLAPHDPAEQFFEGLSLEGAPLPPGGEFWLGTDLLGRDLLSRVIYGARTS
LIIGIVSNGIAVVIGTLVGVTAGFVRGWLGSVLMRLTDLMMAFPALLLAIALAAILQPSLWIVAMVIAMVNWVQIARVIY
SETISLSSKDFVAVERTIGVSARRILFSHLLPHLLPTILVWATLGISTTVLLEATLSFLGVGVQPPMPSWGNIIFESQTY
FISAMWLVLFPGIAIIALSLSFNLVGDALRDELDPTLKGRR

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=274, Percent_Identity=39.4160583941606, Blast_Score=204, Evalue=6e-54,
Organism=Escherichia coli, GI1787760, Length=265, Percent_Identity=36.6037735849057, Blast_Score=184, Evalue=6e-48,
Organism=Escherichia coli, GI1789964, Length=255, Percent_Identity=41.5686274509804, Blast_Score=170, Evalue=8e-44,
Organism=Escherichia coli, GI1789889, Length=249, Percent_Identity=35.7429718875502, Blast_Score=150, Evalue=6e-38,
Organism=Escherichia coli, GI1787498, Length=273, Percent_Identity=34.0659340659341, Blast_Score=146, Evalue=1e-36,
Organism=Escherichia coli, GI1787549, Length=253, Percent_Identity=34.7826086956522, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1788505, Length=228, Percent_Identity=29.3859649122807, Blast_Score=113, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30452; Mature: 30321

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVLKALLKRKAVAIALIYILIVVVAAIFAPWLAPHDPAEQFFEGLSLEGAPLPPGGEFW
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCE
LGTDLLGRDLLSRVIYGARTSLIIGIVSNGIAVVIGTLVGVTAGFVRGWLGSVLMRLTDL
ECHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MMAFPALLLAIALAAILQPSLWIVAMVIAMVNWVQIARVIYSETISLSSKDFVAVERTIG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
VSARRILFSHLLPHLLPTILVWATLGISTTVLLEATLSFLGVGVQPPMPSWGNIIFESQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCHH
YFISAMWLVLFPGIAIIALSLSFNLVGDALRDELDPTLKGRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TVLKALLKRKAVAIALIYILIVVVAAIFAPWLAPHDPAEQFFEGLSLEGAPLPPGGEFW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCE
LGTDLLGRDLLSRVIYGARTSLIIGIVSNGIAVVIGTLVGVTAGFVRGWLGSVLMRLTDL
ECHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MMAFPALLLAIALAAILQPSLWIVAMVIAMVNWVQIARVIYSETISLSSKDFVAVERTIG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
VSARRILFSHLLPHLLPTILVWATLGISTTVLLEATLSFLGVGVQPPMPSWGNIIFESQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCHH
YFISAMWLVLFPGIAIIALSLSFNLVGDALRDELDPTLKGRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]