Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
---|---|
Accession | NC_007963 |
Length | 3,696,649 |
Click here to switch to the map view.
The map label for this gene is 92112300
Identifier: 92112300
GI number: 92112300
Start: 189031
End: 190980
Strand: Direct
Name: 92112300
Synonym: Csal_0165
Alternate gene names: NA
Gene position: 189031-190980 (Clockwise)
Preceding gene: 92112299
Following gene: 92112301
Centisome position: 5.11
GC content: 64.92
Gene sequence:
>1950_bases ATGCTCGATATCCTTCTCTCCAGTCTGGGGCAGCTCTTCACGCTGTCTCATCTGCTCTTCATGGTGCTGGGCGTGCTGGT CGGCCTCGTGGTCGGCATCATCCCCGGCCTCGGTGGCATCGCCGGCATGTCGTTGCTGCTGCCTTTTCTCTACGGCATGG AGCCCGCCGTGGCCCTGGGCATGCTGATGGGCCTGGTCGCCGTGATTCCCACCGGCGATACCTTTGCCTCGGTACTGTTG GGGATTCCCGGCTCCAGCGCATCCCAGGCAACGGTCATCGATGGCTTCTCGCTGGCCAAGCGTGGCCAGGCGGCACGCGC GCTGTCCAGCGCCTTTCTGTCTTCGATGATCGGGGGCATCGTCGGTGCCGTCATCTTGACCGGCTTTATCCTGATCGCTC GTCCGCTTGTACTGTCGTTCTCTTCCTCCGAACTCTTCATGTTGACCCTGCTCGGCCTGTCGATGGTGGCCGTGCTCTCC GGGCGCGACCTCTTCAAGGGGCTGGCCGCCTGCGGCCTGGGCCTGCTGGTGGGCGCCATCGGCATGGCACCGGCCACCGG CGAGTTCCGCATGAATTTCGGACTCGACTATCTCTACGATGGCTTGCCGTTGGTGGTGGTGGGGCTCGGGATCTTCGCTC TCCCGGAGATCGTCGATCTCCTCGTGAAACGCGGTTCGATCGCCGAAGAGCCTTGTGAGCTCGGCGAAGGCTGGAGGGCA GGCATCCGCAACGTTCGTGAGCAACGTGGGCTCGTCGCGCGCTGTGCGGCTATCGGCAGCCTGATCGGCACGATTCCCGG CTTGGCCGGCTCCGTGGTCGACTGGCTCACCTACGGCCATGCGGTGCAGAGCGCCAAGGACAAGTCCGAATTCGGCAAGG GAGACATTCGCGGGGTGATTGCCCCGGAATCCGCCAACAATGCCTGCGCCTGTGGCGCCATGGTGCCGACCCTGCTGTTC GGCGTGCCGGGCTCGGGCACCGCCGCGGTTTTCCTCGGCGGGCTATTGTTGCTCGGCCTGCAGCCGGGGGTCGGCATGAT CGAGACCCATCTCGATCTGACTTACACCATCATCTGGTCGCTGGCCCTGGCCAACATCCTGGGGGCCGCGTTGTGCCTGG TGCTGGCGCGCCCGGTGGCCAGCCTGACCCGGGTTCCCTTCGCCACGCTGGCGCCTTTGATCACGGTGCTGATCATGTTC GCCGCTTTCCAGGCCACGCGTTCCACGGGCGATCTTATCGCGCTGGGGGCGGTGGGCATTCTGGGCGTGCTGTTCAAGCA GGCGAATTGGTCGCGTCCTGCCTTTCTCATCGGCTTCGTGCTGGCGCCGGGGGCGGAGGGATACTTCTACCAGGCGGTGC AGTTCCAGGGGGTGAATGCTTTCGCGCGTCCTGGTGTGTTGATCATCGGTGCCTTGATCCTGGCGGCTCTCTTCATTCCC TTGCTGCGTTCACTGTGGATCAAGCGTCGCCAGGCCGCCTCGGTCGGCGCTGCCGCCACGGCCCGCACCGAGCCTCCGAC CCTGGGGGGCATCGACGTAGTGCTCTTCGCCGCCCTGCTTGGTACGGCGGCCATTGCCTGGATCGACGTAGCCGACCTGA CTCTGATCGGCGGCATCATGCCCCGGCTGGCCATCGCGATCCTCGCCGTCTCCTGCCTTCTGGAGATCGCGCGTTGCCTG ATGCATCGTCCTCAGTGGCAGCCTCAAGCCATCGGCCAGCAAGGGCTCTGGCTGGCAGGCTTCTTCGCTCTGGTCGGCGC CATGCAACTACTGGGCTTCATCACCGCGGCGACGCTGTTCTGCCTCGTGTTCCTCTTGGTCATCGCGCGCCTCAAGCCTT GGGTAGCGGTTATCATGGCGCTAGGCGTGACAGCCTTTCTGGCCGGCATGGCCGAGTTCCTGACACTGACCTATCCGAGC GGGCTGGTCGACCCCTGGCTGTTCGGCTGA
Upstream 100 bases:
>100_bases GAGCACGGCGCCAAGATCTGATGCGCAGCCGGATGTACCGGTCTCAACGGGGCCGGTCATCCCGGCTCCCTCCGGCCACA TAAAACAAGAGCTATACGCC
Downstream 100 bases:
>100_bases AGCAGCGCTGTCATGCACGTGCTGCGGGTCAAGGGATGGCCCGCGGCACCCATGAAAGTAGTCGTCTTGCGTCGCGTGTC TGGCGGCGCTTTCCCATGAG
Product: hypothetical protein
Products: NA
Alternate protein names: ORFZ2 [H]
Number of amino acids: Translated: 649; Mature: 649
Protein sequence:
>649_residues MLDILLSSLGQLFTLSHLLFMVLGVLVGLVVGIIPGLGGIAGMSLLLPFLYGMEPAVALGMLMGLVAVIPTGDTFASVLL GIPGSSASQATVIDGFSLAKRGQAARALSSAFLSSMIGGIVGAVILTGFILIARPLVLSFSSSELFMLTLLGLSMVAVLS GRDLFKGLAACGLGLLVGAIGMAPATGEFRMNFGLDYLYDGLPLVVVGLGIFALPEIVDLLVKRGSIAEEPCELGEGWRA GIRNVREQRGLVARCAAIGSLIGTIPGLAGSVVDWLTYGHAVQSAKDKSEFGKGDIRGVIAPESANNACACGAMVPTLLF GVPGSGTAAVFLGGLLLLGLQPGVGMIETHLDLTYTIIWSLALANILGAALCLVLARPVASLTRVPFATLAPLITVLIMF AAFQATRSTGDLIALGAVGILGVLFKQANWSRPAFLIGFVLAPGAEGYFYQAVQFQGVNAFARPGVLIIGALILAALFIP LLRSLWIKRRQAASVGAAATARTEPPTLGGIDVVLFAALLGTAAIAWIDVADLTLIGGIMPRLAIAILAVSCLLEIARCL MHRPQWQPQAIGQQGLWLAGFFALVGAMQLLGFITAATLFCLVFLLVIARLKPWVAVIMALGVTAFLAGMAEFLTLTYPS GLVDPWLFG
Sequences:
>Translated_649_residues MLDILLSSLGQLFTLSHLLFMVLGVLVGLVVGIIPGLGGIAGMSLLLPFLYGMEPAVALGMLMGLVAVIPTGDTFASVLL GIPGSSASQATVIDGFSLAKRGQAARALSSAFLSSMIGGIVGAVILTGFILIARPLVLSFSSSELFMLTLLGLSMVAVLS GRDLFKGLAACGLGLLVGAIGMAPATGEFRMNFGLDYLYDGLPLVVVGLGIFALPEIVDLLVKRGSIAEEPCELGEGWRA GIRNVREQRGLVARCAAIGSLIGTIPGLAGSVVDWLTYGHAVQSAKDKSEFGKGDIRGVIAPESANNACACGAMVPTLLF GVPGSGTAAVFLGGLLLLGLQPGVGMIETHLDLTYTIIWSLALANILGAALCLVLARPVASLTRVPFATLAPLITVLIMF AAFQATRSTGDLIALGAVGILGVLFKQANWSRPAFLIGFVLAPGAEGYFYQAVQFQGVNAFARPGVLIIGALILAALFIP LLRSLWIKRRQAASVGAAATARTEPPTLGGIDVVLFAALLGTAAIAWIDVADLTLIGGIMPRLAIAILAVSCLLEIARCL MHRPQWQPQAIGQQGLWLAGFFALVGAMQLLGFITAATLFCLVFLLVIARLKPWVAVIMALGVTAFLAGMAEFLTLTYPS GLVDPWLFG >Mature_649_residues MLDILLSSLGQLFTLSHLLFMVLGVLVGLVVGIIPGLGGIAGMSLLLPFLYGMEPAVALGMLMGLVAVIPTGDTFASVLL GIPGSSASQATVIDGFSLAKRGQAARALSSAFLSSMIGGIVGAVILTGFILIARPLVLSFSSSELFMLTLLGLSMVAVLS GRDLFKGLAACGLGLLVGAIGMAPATGEFRMNFGLDYLYDGLPLVVVGLGIFALPEIVDLLVKRGSIAEEPCELGEGWRA GIRNVREQRGLVARCAAIGSLIGTIPGLAGSVVDWLTYGHAVQSAKDKSEFGKGDIRGVIAPESANNACACGAMVPTLLF GVPGSGTAAVFLGGLLLLGLQPGVGMIETHLDLTYTIIWSLALANILGAALCLVLARPVASLTRVPFATLAPLITVLIMF AAFQATRSTGDLIALGAVGILGVLFKQANWSRPAFLIGFVLAPGAEGYFYQAVQFQGVNAFARPGVLIIGALILAALFIP LLRSLWIKRRQAASVGAAATARTEPPTLGGIDVVLFAALLGTAAIAWIDVADLTLIGGIMPRLAIAILAVSCLLEIARCL MHRPQWQPQAIGQQGLWLAGFFALVGAMQLLGFITAATLFCLVFLLVIARLKPWVAVIMALGVTAFLAGMAEFLTLTYPS GLVDPWLFG
Specific function: Unknown
COG id: COG3333
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002823 [H]
Pfam domain/function: PF01970 DUF112 [H]
EC number: NA
Molecular weight: Translated: 67292; Mature: 67292
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDILLSSLGQLFTLSHLLFMVLGVLVGLVVGIIPGLGGIAGMSLLLPFLYGMEPAVALG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHH MLMGLVAVIPTGDTFASVLLGIPGSSASQATVIDGFSLAKRGQAARALSSAFLSSMIGGI HHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHH VGAVILTGFILIARPLVLSFSSSELFMLTLLGLSMVAVLSGRDLFKGLAACGLGLLVGAI HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH GMAPATGEFRMNFGLDYLYDGLPLVVVGLGIFALPEIVDLLVKRGSIAEEPCELGEGWRA HCCCCCCCEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHH GIRNVREQRGLVARCAAIGSLIGTIPGLAGSVVDWLTYGHAVQSAKDKSEFGKGDIRGVI HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE APESANNACACGAMVPTLLFGVPGSGTAAVFLGGLLLLGLQPGVGMIETHLDLTYTIIWS CCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH LALANILGAALCLVLARPVASLTRVPFATLAPLITVLIMFAAFQATRSTGDLIALGAVGI HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH LGVLFKQANWSRPAFLIGFVLAPGAEGYFYQAVQFQGVNAFARPGVLIIGALILAALFIP HHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHEECCCCHHHCCHHHHHHHHHHHHHHHH LLRSLWIKRRQAASVGAAATARTEPPTLGGIDVVLFAALLGTAAIAWIDVADLTLIGGIM HHHHHHHHHHHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PRLAIAILAVSCLLEIARCLMHRPQWQPQAIGQQGLWLAGFFALVGAMQLLGFITAATLF HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH CLVFLLVIARLKPWVAVIMALGVTAFLAGMAEFLTLTYPSGLVDPWLFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MLDILLSSLGQLFTLSHLLFMVLGVLVGLVVGIIPGLGGIAGMSLLLPFLYGMEPAVALG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHH MLMGLVAVIPTGDTFASVLLGIPGSSASQATVIDGFSLAKRGQAARALSSAFLSSMIGGI HHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHH VGAVILTGFILIARPLVLSFSSSELFMLTLLGLSMVAVLSGRDLFKGLAACGLGLLVGAI HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH GMAPATGEFRMNFGLDYLYDGLPLVVVGLGIFALPEIVDLLVKRGSIAEEPCELGEGWRA HCCCCCCCEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHH GIRNVREQRGLVARCAAIGSLIGTIPGLAGSVVDWLTYGHAVQSAKDKSEFGKGDIRGVI HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE APESANNACACGAMVPTLLFGVPGSGTAAVFLGGLLLLGLQPGVGMIETHLDLTYTIIWS CCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH LALANILGAALCLVLARPVASLTRVPFATLAPLITVLIMFAAFQATRSTGDLIALGAVGI HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH LGVLFKQANWSRPAFLIGFVLAPGAEGYFYQAVQFQGVNAFARPGVLIIGALILAALFIP HHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHEECCCCHHHCCHHHHHHHHHHHHHHHH LLRSLWIKRRQAASVGAAATARTEPPTLGGIDVVLFAALLGTAAIAWIDVADLTLIGGIM HHHHHHHHHHHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PRLAIAILAVSCLLEIARCLMHRPQWQPQAIGQQGLWLAGFFALVGAMQLLGFITAATLF HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH CLVFLLVIARLKPWVAVIMALGVTAFLAGMAEFLTLTYPSGLVDPWLFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8672817 [H]