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The map label for this gene is 92112228

Identifier: 92112228

GI number: 92112228

Start: 116845

End: 118059

Strand: Direct

Name: 92112228

Synonym: Csal_0093

Alternate gene names: NA

Gene position: 116845-118059 (Clockwise)

Preceding gene: 92112218

Following gene: 92112229

Centisome position: 3.16

GC content: 67.0

Gene sequence:

>1215_bases
ATGGTCGCACCCGGGAACTGGGAAATGGAGAAGGGCATGCCGCCGTCGCGTCCGGCGCACCTGCTGCATGATGTGCCGCT
GCCGGCGGCGGCGGTCTTCGAGGCGCCGCTGACCCACAACCTGGCGTGGATGCAGCGCTTCGCCGAGGGGCATGGCGCCA
AGCTGGCGCCGCACGGGAAGACCACCATGGCCCCGGCATTGTTCAGGCGACAGCTCGAGGCGGGCGCCTGGGGAATCACG
CTGGCGACGGCGGTGCAGACGGTGACGGCGCATGCCCATGGCGTCGACCGTGTGCTGATGGCCAACCAGCTGGTCGGCCG
GCCGAACATGACGCTGGTGGCGGATGCCATCGAGGCGGGGCTGGAGTACTACTGCGTGGTGGACGGCGTCGATAACGTGC
GCGATCTAGGGGCGTTCTTCGCCGACAGGGAGCTCACGCTGAACGTGCTGATCGAGCTGGGCGTCGATGGCGGACGCTGC
GGCTGCCGCAACGCCGCGCAGGTCGATGCGCTGGTGGCAGAGATCGCCAGGCAGCCCGCGCTGGCCCTCGTCGGCATCGA
AGGTTACGAGGGGATGATCGCCGGCGGCGATGAAGCCGCTGCCGTGCGTGCCTACGGCGAGCGGTTGGTCGAGACCGTCC
GCACGTTGCAGGCCAGTGATGTTCTGCAACGCGAGGCGCCGATCGTCACCGCTTCCGGCTCCAAGTGGTTCGACCTGATC
GCGGAGACGTTCGACAGGGCGGAGCTGCGCGAGCACTACACGCCGGTGCTGAGGCCGGGCTGCTACGTGGTGCACGATCA
CAAGCTCTATGCCGGTGCGATGGAGGCGATCAAGGCGCGCGATCCCGGCCTGGAGGGCGAGCTGCGCCCGGCGCTGGAAG
TCTTTGCTCATGTGCAGTCGCTGCCCGAACCGGGCCTGGCGATCATTGCGCTGGGCAAGCGCGATATCGGGCACGAGCCT
GATCTGCCGTTGCCGCTACGCCGCTATCCACGGGAGGCGGGAGGTACGGTGAGTGTGGACGTCAGCGGCTGGCGAACGAC
GCACATCATGGATCAGCATGCGTTTCTCGAGATTCCCGAGCACGCCGATATCGCGGTAGGCGATGTGCTGGCCTTCGGCA
CGTCCCATCCCTGCCTGACGTTCGACAAGTGGCGGCGCGTACTATGCGTCGATGAAGCGCTGGCAGTGAAGGAAGTGATG
ACGACGCATTTCTGA

Upstream 100 bases:

>100_bases
GATCCATATTCGGTGACTGATGGGCTTGTTACCCGCTAACATATTTTTATTTTTTGTGTTAGTAAATACCCGGAAGGCAT
GACGAGGCGAGGAGAAAATG

Downstream 100 bases:

>100_bases
GTGATGCAAGGCATGCCGTAAAATGGCGATGAGACGTAAGGCGGGGGTACATGCGATATGCTAATATTCACCCCCGCTTA
ATGAATTCGTCCACCGGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MVAPGNWEMEKGMPPSRPAHLLHDVPLPAAAVFEAPLTHNLAWMQRFAEGHGAKLAPHGKTTMAPALFRRQLEAGAWGIT
LATAVQTVTAHAHGVDRVLMANQLVGRPNMTLVADAIEAGLEYYCVVDGVDNVRDLGAFFADRELTLNVLIELGVDGGRC
GCRNAAQVDALVAEIARQPALALVGIEGYEGMIAGGDEAAAVRAYGERLVETVRTLQASDVLQREAPIVTASGSKWFDLI
AETFDRAELREHYTPVLRPGCYVVHDHKLYAGAMEAIKARDPGLEGELRPALEVFAHVQSLPEPGLAIIALGKRDIGHEP
DLPLPLRRYPREAGGTVSVDVSGWRTTHIMDQHAFLEIPEHADIAVGDVLAFGTSHPCLTFDKWRRVLCVDEALAVKEVM
TTHF

Sequences:

>Translated_404_residues
MVAPGNWEMEKGMPPSRPAHLLHDVPLPAAAVFEAPLTHNLAWMQRFAEGHGAKLAPHGKTTMAPALFRRQLEAGAWGIT
LATAVQTVTAHAHGVDRVLMANQLVGRPNMTLVADAIEAGLEYYCVVDGVDNVRDLGAFFADRELTLNVLIELGVDGGRC
GCRNAAQVDALVAEIARQPALALVGIEGYEGMIAGGDEAAAVRAYGERLVETVRTLQASDVLQREAPIVTASGSKWFDLI
AETFDRAELREHYTPVLRPGCYVVHDHKLYAGAMEAIKARDPGLEGELRPALEVFAHVQSLPEPGLAIIALGKRDIGHEP
DLPLPLRRYPREAGGTVSVDVSGWRTTHIMDQHAFLEIPEHADIAVGDVLAFGTSHPCLTFDKWRRVLCVDEALAVKEVM
TTHF
>Mature_404_residues
MVAPGNWEMEKGMPPSRPAHLLHDVPLPAAAVFEAPLTHNLAWMQRFAEGHGAKLAPHGKTTMAPALFRRQLEAGAWGIT
LATAVQTVTAHAHGVDRVLMANQLVGRPNMTLVADAIEAGLEYYCVVDGVDNVRDLGAFFADRELTLNVLIELGVDGGRC
GCRNAAQVDALVAEIARQPALALVGIEGYEGMIAGGDEAAAVRAYGERLVETVRTLQASDVLQREAPIVTASGSKWFDLI
AETFDRAELREHYTPVLRPGCYVVHDHKLYAGAMEAIKARDPGLEGELRPALEVFAHVQSLPEPGLAIIALGKRDIGHEP
DLPLPLRRYPREAGGTVSVDVSGWRTTHIMDQHAFLEIPEHADIAVGDVLAFGTSHPCLTFDKWRRVLCVDEALAVKEVM
TTHF

Specific function: Catalyzes the reversible cleavage of D-theronine or D- allothreonine into glycine and acetaldehyde. Can also cleave D- beta-phenylserine, D-beta-hydroxy-alpha-aminovaleric acid, D-beta- 3,4-dihydroxyphenylserine and D-beta-3,4- methylenedioxyphenylserine

COG id: COG3616

COG function: function code E; Predicted amino acid aldolase or racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DSD1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001608 [H]

Pfam domain/function: PF01168 Ala_racemase_N [H]

EC number: =4.1.2.42 [H]

Molecular weight: Translated: 43818; Mature: 43818

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAPGNWEMEKGMPPSRPAHLLHDVPLPAAAVFEAPLTHNLAWMQRFAEGHGAKLAPHGK
CCCCCCCCHHCCCCCCCCHHHHHCCCCCHHHHHHCCHHCCHHHHHHHHHCCCCEECCCCC
TTMAPALFRRQLEAGAWGITLATAVQTVTAHAHGVDRVLMANQLVGRPNMTLVADAIEAG
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEHHHHHCC
LEYYCVVDGVDNVRDLGAFFADRELTLNVLIELGVDGGRCGCRNAAQVDALVAEIARQPA
CEEEEEECCCCHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCC
LALVGIEGYEGMIAGGDEAAAVRAYGERLVETVRTLQASDVLQREAPIVTASGSKWFDLI
EEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHH
AETFDRAELREHYTPVLRPGCYVVHDHKLYAGAMEAIKARDPGLEGELRPALEVFAHVQS
HHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
LPEPGLAIIALGKRDIGHEPDLPLPLRRYPREAGGTVSVDVSGWRTTHIMDQHAFLEIPE
CCCCCEEEEEECCCCCCCCCCCCCCHHHCCHHCCCEEEEEECCCEEEEEECCHHEEECCC
HADIAVGDVLAFGTSHPCLTFDKWRRVLCVDEALAVKEVMTTHF
CCCEEHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVAPGNWEMEKGMPPSRPAHLLHDVPLPAAAVFEAPLTHNLAWMQRFAEGHGAKLAPHGK
CCCCCCCCHHCCCCCCCCHHHHHCCCCCHHHHHHCCHHCCHHHHHHHHHCCCCEECCCCC
TTMAPALFRRQLEAGAWGITLATAVQTVTAHAHGVDRVLMANQLVGRPNMTLVADAIEAG
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEHHHHHCC
LEYYCVVDGVDNVRDLGAFFADRELTLNVLIELGVDGGRCGCRNAAQVDALVAEIARQPA
CEEEEEECCCCHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCC
LALVGIEGYEGMIAGGDEAAAVRAYGERLVETVRTLQASDVLQREAPIVTASGSKWFDLI
EEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHH
AETFDRAELREHYTPVLRPGCYVVHDHKLYAGAMEAIKARDPGLEGELRPALEVFAHVQS
HHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
LPEPGLAIIALGKRDIGHEPDLPLPLRRYPREAGGTVSVDVSGWRTTHIMDQHAFLEIPE
CCCCCEEEEEECCCCCCCCCCCCCCHHHCCHHCCCEEEEEECCCEEEEEECCHHEEECCC
HADIAVGDVLAFGTSHPCLTFDKWRRVLCVDEALAVKEVMTTHF
CCCEEHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9642221 [H]