Definition Nitrobacter hamburgensis X14 plasmid 3, complete sequence.
Accession NC_007961
Length 121,408

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The map label for this gene is 92109770

Identifier: 92109770

GI number: 92109770

Start: 117712

End: 117969

Strand: Reverse

Name: 92109770

Synonym: Nham_4670

Alternate gene names: NA

Gene position: 117969-117712 (Counterclockwise)

Preceding gene: 92109771

Following gene: 92109768

Centisome position: 97.17

GC content: 67.44

Gene sequence:

>258_bases
ATGCCTGAGTTTGAGCGTCACCCGCTTCACCTTCGCCGCATCGATCCGGCCCGCAACATGCGGCGGTTCTACCTGCTCTC
GATCCAGCCGACCCTGTTCGGCGGAGTGTCGTTGATCCGCAACTGGGGCCGGATCGGCACCAACGGCCAGACGATGATGC
AAACCTTCGACGACAGCACGGATGCCGGCGACGCGCTCGGCCGGCTGGAGCGCGCGAAGCGCCGGCGCGGCTACGGCGAT
GCCAGCGCCGAGCGTTAG

Upstream 100 bases:

>100_bases
ATCCGTGGTGCAATTGACCATCGGGAAAATGAATCATTCGTGGCGGGTCGATTCATTATTCTAATTGGACACCGATTCCT
GAAGACGCGAGAATCGGTGC

Downstream 100 bases:

>100_bases
CCGAACGTTCCCGGCGATGCACCCGAGAGTCAATGACAAGCAGAAGGCCCGGCGGCTTACGCCGGGCCCTTGCCATCTCG
CTCAAAATGGGATTTCGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 84

Protein sequence:

>85_residues
MPEFERHPLHLRRIDPARNMRRFYLLSIQPTLFGGVSLIRNWGRIGTNGQTMMQTFDDSTDAGDALGRLERAKRRRGYGD
ASAER

Sequences:

>Translated_85_residues
MPEFERHPLHLRRIDPARNMRRFYLLSIQPTLFGGVSLIRNWGRIGTNGQTMMQTFDDSTDAGDALGRLERAKRRRGYGD
ASAER
>Mature_84_residues
PEFERHPLHLRRIDPARNMRRFYLLSIQPTLFGGVSLIRNWGRIGTNGQTMMQTFDDSTDAGDALGRLERAKRRRGYGDA
SAER

Specific function: Unknown

COG id: COG3831

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008893 [H]

Pfam domain/function: PF05406 WGR [H]

EC number: NA

Molecular weight: Translated: 9806; Mature: 9675

Theoretical pI: Translated: 11.49; Mature: 11.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEFERHPLHLRRIDPARNMRRFYLLSIQPTLFGGVSLIRNWGRIGTNGQTMMQTFDDST
CCCCCCCCCEEEECCCHHCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCC
DAGDALGRLERAKRRRGYGDASAER
CCHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PEFERHPLHLRRIDPARNMRRFYLLSIQPTLFGGVSLIRNWGRIGTNGQTMMQTFDDST
CCCCCCCCEEEECCCHHCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCC
DAGDALGRLERAKRRRGYGDASAER
CCHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]