Definition | Nitrobacter hamburgensis X14 plasmid 3, complete sequence. |
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Accession | NC_007961 |
Length | 121,408 |
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The map label for this gene is 92109770
Identifier: 92109770
GI number: 92109770
Start: 117712
End: 117969
Strand: Reverse
Name: 92109770
Synonym: Nham_4670
Alternate gene names: NA
Gene position: 117969-117712 (Counterclockwise)
Preceding gene: 92109771
Following gene: 92109768
Centisome position: 97.17
GC content: 67.44
Gene sequence:
>258_bases ATGCCTGAGTTTGAGCGTCACCCGCTTCACCTTCGCCGCATCGATCCGGCCCGCAACATGCGGCGGTTCTACCTGCTCTC GATCCAGCCGACCCTGTTCGGCGGAGTGTCGTTGATCCGCAACTGGGGCCGGATCGGCACCAACGGCCAGACGATGATGC AAACCTTCGACGACAGCACGGATGCCGGCGACGCGCTCGGCCGGCTGGAGCGCGCGAAGCGCCGGCGCGGCTACGGCGAT GCCAGCGCCGAGCGTTAG
Upstream 100 bases:
>100_bases ATCCGTGGTGCAATTGACCATCGGGAAAATGAATCATTCGTGGCGGGTCGATTCATTATTCTAATTGGACACCGATTCCT GAAGACGCGAGAATCGGTGC
Downstream 100 bases:
>100_bases CCGAACGTTCCCGGCGATGCACCCGAGAGTCAATGACAAGCAGAAGGCCCGGCGGCTTACGCCGGGCCCTTGCCATCTCG CTCAAAATGGGATTTCGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 85; Mature: 84
Protein sequence:
>85_residues MPEFERHPLHLRRIDPARNMRRFYLLSIQPTLFGGVSLIRNWGRIGTNGQTMMQTFDDSTDAGDALGRLERAKRRRGYGD ASAER
Sequences:
>Translated_85_residues MPEFERHPLHLRRIDPARNMRRFYLLSIQPTLFGGVSLIRNWGRIGTNGQTMMQTFDDSTDAGDALGRLERAKRRRGYGD ASAER >Mature_84_residues PEFERHPLHLRRIDPARNMRRFYLLSIQPTLFGGVSLIRNWGRIGTNGQTMMQTFDDSTDAGDALGRLERAKRRRGYGDA SAER
Specific function: Unknown
COG id: COG3831
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008893 [H]
Pfam domain/function: PF05406 WGR [H]
EC number: NA
Molecular weight: Translated: 9806; Mature: 9675
Theoretical pI: Translated: 11.49; Mature: 11.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEFERHPLHLRRIDPARNMRRFYLLSIQPTLFGGVSLIRNWGRIGTNGQTMMQTFDDST CCCCCCCCCEEEECCCHHCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCC DAGDALGRLERAKRRRGYGDASAER CCHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure PEFERHPLHLRRIDPARNMRRFYLLSIQPTLFGGVSLIRNWGRIGTNGQTMMQTFDDST CCCCCCCCEEEECCCHHCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCC DAGDALGRLERAKRRRGYGDASAER CCHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]