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The map label for this gene is mqsR [H]

Identifier: 92109759

GI number: 92109759

Start: 108752

End: 109057

Strand: Reverse

Name: mqsR [H]

Synonym: Nham_4658

Alternate gene names: 92109759

Gene position: 109057-108752 (Counterclockwise)

Preceding gene: 92109768

Following gene: 92109758

Centisome position: 89.83

GC content: 62.42

Gene sequence:

>306_bases
ATGGAGAAGAGGCGTCCGACGTACGATCTTGAAGCGATCAAGACGGCGCTCGGGTCGGCCGAGAGGCTTGCGATCACCTC
ATCCGCGCTGCGCGACGCCGTCGCTTTGGGCTTCGATCGCGCGCGGGTGGTCCAGACGATCGCAGGAATCGAGCGGCGGA
TGTTCTACAAGTCGATGACGACCTTCGCCGATCATCGCGTCTGGCAGGACGTCTACCACGTCCCGGCGCGCGGCGTGACG
ATCTACGTGAAGATCCAGGCGGACGTCGTGACCGAGTTCACGGTCATGTCGTTCAAGGAGCAATGA

Upstream 100 bases:

>100_bases
TCCCCCTCTCTTCTTTCCTCCCCCTGCACATCCGTGGGGCGTCAAAGGTCGATCCGACCCCGCCTTTGCTTGATTTGCCC
CCATTATGGTGGCATATGGT

Downstream 100 bases:

>100_bases
CCATGGCGGCATCGAAGATGGACGTGCCCAACACAATGGTCTCTCCGGAGACAGGAGAGACGCTGCGCCGCGGCGTTCGT
CCCTTAATCGTGACCTACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MEKRRPTYDLEAIKTALGSAERLAITSSALRDAVALGFDRARVVQTIAGIERRMFYKSMTTFADHRVWQDVYHVPARGVT
IYVKIQADVVTEFTVMSFKEQ

Sequences:

>Translated_101_residues
MEKRRPTYDLEAIKTALGSAERLAITSSALRDAVALGFDRARVVQTIAGIERRMFYKSMTTFADHRVWQDVYHVPARGVT
IYVKIQADVVTEFTVMSFKEQ
>Mature_101_residues
MEKRRPTYDLEAIKTALGSAERLAITSSALRDAVALGFDRARVVQTIAGIERRMFYKSMTTFADHRVWQDVYHVPARGVT
IYVKIQADVVTEFTVMSFKEQ

Specific function: AI-2 controlled regulator that controls biofilm formation. Controls biofilm formation by inducing motility through the activation of qseBC and csrA. This leads to the activation of the master flagellum regulon flhDC, of fliA, motA and crl [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789399, Length=101, Percent_Identity=41.5841584158416, Blast_Score=71, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11528; Mature: 11528

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKRRPTYDLEAIKTALGSAERLAITSSALRDAVALGFDRARVVQTIAGIERRMFYKSMT
CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
TFADHRVWQDVYHVPARGVTIYVKIQADVVTEFTVMSFKEQ
HHHHHHHHHHHHHCCCCCEEEEEEEEECHHHHHHHHHCCCC
>Mature Secondary Structure
MEKRRPTYDLEAIKTALGSAERLAITSSALRDAVALGFDRARVVQTIAGIERRMFYKSMT
CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
TFADHRVWQDVYHVPARGVTIYVKIQADVVTEFTVMSFKEQ
HHHHHHHHHHHHHCCCCCEEEEEEEEECHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]