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The map label for this gene is sohA [C]

Identifier: 92109745

GI number: 92109745

Start: 90904

End: 91245

Strand: Reverse

Name: sohA [C]

Synonym: Nham_4640

Alternate gene names: 92109745

Gene position: 91245-90904 (Counterclockwise)

Preceding gene: 92109746

Following gene: 92109744

Centisome position: 75.16

GC content: 62.87

Gene sequence:

>342_bases
ATGGCAAAGACAGCTGAAATCCTTGAAATCCCCGCGACGATAACGGACCGCGGCCAGACGACCGTGCCCGCCGCCATCCG
CAAGATGCTTGCACTTGGCAAACGCGACCAAGTGGTGTTTCGCGGGCTGGCTGACGGCACCGTCATGATCTCGAAAATGG
AGGCGCGCGCGGACCAGAACGATCCCGTGATCGGCAAGTTCCTCGACTTCCTGGCGCGCGACATGGCGAAAGAACCTGCA
CGGATTCGGCCGATGTCGAAGTCGCTGCTCACGCGCGGCAAGGCGCTGGTCAAGGGCGTCAAGGTCGACCTCGACGCAGC
TCTCCCGGTCGACGAGGCGTGA

Upstream 100 bases:

>100_bases
CAGGCTTGGAAACATTACTTTCTCGCCAAACGAATAGGCGATCTTGACTTACAATGCAAATGCATTACATGGGTTGGCAT
GACGACGCAAGGAGCCGATT

Downstream 100 bases:

>100_bases
GCGACGACATCGTTAAGATCAACGGTTGGACGATCTACGCGCATCCCCTCTTTCTCGATCAGCTCGAGGCGATGATCGAG
ACCGTCGAGAAGACACGGAA

Product: putative regulator PrlF

Products: NA

Alternate protein names: AbrB Family Transcriptional Regulator; HtaR Suppressor Protein; HtrA Suppressor Protein

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MAKTAEILEIPATITDRGQTTVPAAIRKMLALGKRDQVVFRGLADGTVMISKMEARADQNDPVIGKFLDFLARDMAKEPA
RIRPMSKSLLTRGKALVKGVKVDLDAALPVDEA

Sequences:

>Translated_113_residues
MAKTAEILEIPATITDRGQTTVPAAIRKMLALGKRDQVVFRGLADGTVMISKMEARADQNDPVIGKFLDFLARDMAKEPA
RIRPMSKSLLTRGKALVKGVKVDLDAALPVDEA
>Mature_112_residues
AKTAEILEIPATITDRGQTTVPAAIRKMLALGKRDQVVFRGLADGTVMISKMEARADQNDPVIGKFLDFLARDMAKEPAR
IRPMSKSLLTRGKALVKGVKVDLDAALPVDEA

Specific function: Prlf Appears To Be A Bifunctional Protein, With The Ability To Regulate Its Own Expression As Well As Relieve The Export Block Imposed By High-Level Synthesis Of The Lamb-Lacz Hybrid Protein. [C]

COG id: COG2002

COG function: function code K; Regulators of stationary/sporulation gene expression

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12247; Mature: 12115

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKTAEILEIPATITDRGQTTVPAAIRKMLALGKRDQVVFRGLADGTVMISKMEARADQN
CCCCCCCEECCCCCCCCCCCCHHHHHHHHHHCCCCCHHEEECCCCCEEEEHHHHHCCCCC
DPVIGKFLDFLARDMAKEPARIRPMSKSLLTRGKALVKGVKVDLDAALPVDEA
CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
AKTAEILEIPATITDRGQTTVPAAIRKMLALGKRDQVVFRGLADGTVMISKMEARADQN
CCCCCCEECCCCCCCCCCCCHHHHHHHHHHCCCCCHHEEECCCCCEEEEHHHHHCCCCC
DPVIGKFLDFLARDMAKEPARIRPMSKSLLTRGKALVKGVKVDLDAALPVDEA
CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA