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The map label for this gene is 92109733

Identifier: 92109733

GI number: 92109733

Start: 79517

End: 80317

Strand: Reverse

Name: 92109733

Synonym: Nham_4626

Alternate gene names: NA

Gene position: 80317-79517 (Counterclockwise)

Preceding gene: 92109735

Following gene: 92109731

Centisome position: 66.15

GC content: 59.05

Gene sequence:

>801_bases
ATGGACTATTATGCGGGGATCGACGTGTCTTTGAAAGAGAGCAGCATCTGCGTTGTTGACAGGACTGGCAACGTCGTCCG
CGAGGTCAAGGTTGCCAGCGAGGCTGAGGTGCTTATTGGCTATTTCGACGAGCTGGAATTACCTGTCAGCCGCATTGGGC
TCGAGGCTGGGCCGTTGTCGCAGTGGCTGCATGCTGCGCTTTTGGCCGCCGGGCGCGATGCAGTTTTGCTCGAGACACGG
CATGTGAAAGCAGCACTCTCGGCCATGACCGTCAAGACCGACCGGAAGGATGCGCGCGGGATCGCTCAGTTGCTGCGGAT
GGGCTGGTACCGTCCGGTTCACGCGAAATCGGTGCCCTGCAAGGATACTCGGGCTCTGCTTGTTGGACGAAAACTTCTGC
AGGGCAAGCTTCTCGACGTCGAACTGAGCATCCGCGGCATCCTGCGTGGCTACGGGCTGAAGGTCGGCGAAGTGAGCCGT
GGACGGTTTGAAGCGCGCATTCGGGAATTGACAGCGGAGCATGTGACCCTGGAAATGGTGATTGGCGCGATGCTCGCTGC
GAGGACGGCGTTGTGGAACGAGTTCACCAGGTTGCATCGTGAGATGTTGAAGATCGCGCGGGCCGACAAGGTTTGTCGGC
GATTGATGAGCACCCCTGGCGTCGGCCGCGCCTACTTCGGGCTCACGCCGAAAAAATATCAGTCGGGTGAGACCGATCGG
GACGGAGGCGTCAGCACCCTCATGCAGTTGCGCTTCACTTCGCTCGTTGTGATTAACTCACGATGGGACTTGCACCTATA
A

Upstream 100 bases:

>100_bases
GCCTTCGCGAGCCTAGCCAGGTCAGGTGGCTGTCCCTCAGAATGATGATGTTGAAACGGAGTCCGAGTGATCGGCTCCAG
GCATCAAGTGAGGAACAGCC

Downstream 100 bases:

>100_bases
GAATGCGCCCATGCTGAGCGCGCACAGAAAAGGCCGCCGATTGGGCGGCCTTCGTGTAAGGGGAGCGCGGCTGCGCGTCT
CAATCAGGTACCGCCGCTGA

Product: transposase IS116/IS110/IS902

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MDYYAGIDVSLKESSICVVDRTGNVVREVKVASEAEVLIGYFDELELPVSRIGLEAGPLSQWLHAALLAAGRDAVLLETR
HVKAALSAMTVKTDRKDARGIAQLLRMGWYRPVHAKSVPCKDTRALLVGRKLLQGKLLDVELSIRGILRGYGLKVGEVSR
GRFEARIRELTAEHVTLEMVIGAMLAARTALWNEFTRLHREMLKIARADKVCRRLMSTPGVGRAYFGLTPKKYQSGETDR
DGGVSTLMQLRFTSLVVINSRWDLHL

Sequences:

>Translated_266_residues
MDYYAGIDVSLKESSICVVDRTGNVVREVKVASEAEVLIGYFDELELPVSRIGLEAGPLSQWLHAALLAAGRDAVLLETR
HVKAALSAMTVKTDRKDARGIAQLLRMGWYRPVHAKSVPCKDTRALLVGRKLLQGKLLDVELSIRGILRGYGLKVGEVSR
GRFEARIRELTAEHVTLEMVIGAMLAARTALWNEFTRLHREMLKIARADKVCRRLMSTPGVGRAYFGLTPKKYQSGETDR
DGGVSTLMQLRFTSLVVINSRWDLHL
>Mature_266_residues
MDYYAGIDVSLKESSICVVDRTGNVVREVKVASEAEVLIGYFDELELPVSRIGLEAGPLSQWLHAALLAAGRDAVLLETR
HVKAALSAMTVKTDRKDARGIAQLLRMGWYRPVHAKSVPCKDTRALLVGRKLLQGKLLDVELSIRGILRGYGLKVGEVSR
GRFEARIRELTAEHVTLEMVIGAMLAARTALWNEFTRLHREMLKIARADKVCRRLMSTPGVGRAYFGLTPKKYQSGETDR
DGGVSTLMQLRFTSLVVINSRWDLHL

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 29642; Mature: 29642

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYYAGIDVSLKESSICVVDRTGNVVREVKVASEAEVLIGYFDELELPVSRIGLEAGPLS
CCCCCCCEEEECCCCEEEEECCCCHHHHHHHHCCHHHEEEEHHHCCCCHHHHCCCCCHHH
QWLHAALLAAGRDAVLLETRHVKAALSAMTVKTDRKDARGIAQLLRMGWYRPVHAKSVPC
HHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
KDTRALLVGRKLLQGKLLDVELSIRGILRGYGLKVGEVSRGRFEARIRELTAEHVTLEMV
CHHHHHHHHHHHHCCEEEEEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
IGAMLAARTALWNEFTRLHREMLKIARADKVCRRLMSTPGVGRAYFGLTPKKYQSGETDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHCCCCCCC
DGGVSTLMQLRFTSLVVINSRWDLHL
CCHHHHHHHHHHHEEEEEECCCCCCC
>Mature Secondary Structure
MDYYAGIDVSLKESSICVVDRTGNVVREVKVASEAEVLIGYFDELELPVSRIGLEAGPLS
CCCCCCCEEEECCCCEEEEECCCCHHHHHHHHCCHHHEEEEHHHCCCCHHHHCCCCCHHH
QWLHAALLAAGRDAVLLETRHVKAALSAMTVKTDRKDARGIAQLLRMGWYRPVHAKSVPC
HHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
KDTRALLVGRKLLQGKLLDVELSIRGILRGYGLKVGEVSRGRFEARIRELTAEHVTLEMV
CHHHHHHHHHHHHCCEEEEEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
IGAMLAARTALWNEFTRLHREMLKIARADKVCRRLMSTPGVGRAYFGLTPKKYQSGETDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHCCCCCCC
DGGVSTLMQLRFTSLVVINSRWDLHL
CCHHHHHHHHHHHEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1324903; 12704232 [H]