Definition | Nitrobacter hamburgensis X14 plasmid 3, complete sequence. |
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Accession | NC_007961 |
Length | 121,408 |
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The map label for this gene is 92109718
Identifier: 92109718
GI number: 92109718
Start: 61332
End: 61805
Strand: Reverse
Name: 92109718
Synonym: Nham_4606
Alternate gene names: NA
Gene position: 61805-61332 (Counterclockwise)
Preceding gene: 92109720
Following gene: 92109717
Centisome position: 50.91
GC content: 54.22
Gene sequence:
>474_bases GTGCGCCTCCATCGGCCGGCTCGCAGCTCGACCGTCGATGGCGCATTAAATCCTGTGGTGACTCTGATTCGGCCGCGACA AATCGACTCGCATCCCGACCACGGCGCACCTCAACAAGCGATCGCCTACGGCGTGGACGCTCGATGCACACCGACCATTC GAAACCAAACTTGGCAATATTGTACGGCGGACTACGATCCATCGCTTCGGCAACACGACGAACTTCTTCGCTGTATCGGA GCGCTTGACGACCTCAACTTTCTGCATAGTTTCCTCCATAAGACGTCGGAAGGGCTTGCTCCGGCTTGGCGTCATCAACA TCTCGCGCCTGCCGCTGGTATCTGGAGTTTGTTGATCGACCAAAGCAATAAGGATTCTCACTGTGTTCCGATCAAGATTG TCGCGTTACAAAATCCCCCAATTCTCAATGGTGCTGACGGGGAACACAACCTGATATCGACACTTATTGTGTGA
Upstream 100 bases:
>100_bases CAAGATGGGCGTAGGCCTCGATCAGAAGTTGGGGGCCGGTTCTTGTCGCTTCGAACGACACGTGCATGCGCAGCACAGGG CTATCCATGCGCCGGACCAT
Downstream 100 bases:
>100_bases GTGTTGTGTGAGCCGCGCAGGCGGAGGTACAGGGTCGGAAGAAAAATCCGTCCTGCACACCGGGAGTAAGCTATTGCTGC CTCAAGAACTGCACGGAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MRLHRPARSSTVDGALNPVVTLIRPRQIDSHPDHGAPQQAIAYGVDARCTPTIRNQTWQYCTADYDPSLRQHDELLRCIG ALDDLNFLHSFLHKTSEGLAPAWRHQHLAPAAGIWSLLIDQSNKDSHCVPIKIVALQNPPILNGADGEHNLISTLIV
Sequences:
>Translated_157_residues MRLHRPARSSTVDGALNPVVTLIRPRQIDSHPDHGAPQQAIAYGVDARCTPTIRNQTWQYCTADYDPSLRQHDELLRCIG ALDDLNFLHSFLHKTSEGLAPAWRHQHLAPAAGIWSLLIDQSNKDSHCVPIKIVALQNPPILNGADGEHNLISTLIV >Mature_157_residues MRLHRPARSSTVDGALNPVVTLIRPRQIDSHPDHGAPQQAIAYGVDARCTPTIRNQTWQYCTADYDPSLRQHDELLRCIG ALDDLNFLHSFLHKTSEGLAPAWRHQHLAPAAGIWSLLIDQSNKDSHCVPIKIVALQNPPILNGADGEHNLISTLIV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17399; Mature: 17399
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLHRPARSSTVDGALNPVVTLIRPRQIDSHPDHGAPQQAIAYGVDARCTPTIRNQTWQY CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHCCCCCCE CTADYDPSLRQHDELLRCIGALDDLNFLHSFLHKTSEGLAPAWRHQHLAPAAGIWSLLID EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHC QSNKDSHCVPIKIVALQNPPILNGADGEHNLISTLIV CCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHCC >Mature Secondary Structure MRLHRPARSSTVDGALNPVVTLIRPRQIDSHPDHGAPQQAIAYGVDARCTPTIRNQTWQY CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHCCCCCCE CTADYDPSLRQHDELLRCIGALDDLNFLHSFLHKTSEGLAPAWRHQHLAPAAGIWSLLID EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHC QSNKDSHCVPIKIVALQNPPILNGADGEHNLISTLIV CCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA