Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is pntAA [H]
Identifier: 91790377
GI number: 91790377
Start: 4807912
End: 4809027
Strand: Reverse
Name: pntAA [H]
Synonym: Bpro_4546
Alternate gene names: 91790377
Gene position: 4809027-4807912 (Counterclockwise)
Preceding gene: 91790378
Following gene: 91790376
Centisome position: 92.48
GC content: 66.85
Gene sequence:
>1116_bases ATGCTGATTGGGGTACCTGCCGAAATCACGGCCGGAGAGACTCGCGTTGCCATCACGCCGGAAACGGCCAAAAAGCTCAA GGCTCAGGGGCACACCGTTCGCGTCCAGTCCGGCGCCGGCGTCGCCGCCAGCGTTCCAGACGATGCCTACACCGCGGTGG GGGTCGAGATCACCGACGCCGCGGGTGCCTATGCGGCGGACATCGTGCTCAAGGTGCGCTGCCCGGTGGACGGCGAAATG GCGCATGCCAAGGCCGGCGGCGTGTTGGTCGGCATGCTCAACCCCTTTGATGCGACCGGCCTGCAGCGGCTGGCCGCCGC GGGGCTGACCTCCTTTGCCCTGGAAGCGGCGCCGCGCACCAGCCGGGCCCAAAGCATGGACGTGCTGTCTTCGCAGGCCA ACATTGCCGGCTACAAGGCCGTGATGATGGCGGCTGAACAGTACCAGCGGTTTTTTCCCATGCTGATGACCGCGGCCGGC ACGGTCAAGGCGGCTCGCGTGGTGATCCTGGGCGTCGGTGTCGCCGGGCTGCAGGCGATTGCCACGGCCAAGCGCCTGGG CGCCGTGATCGAGGCCAGCGACGTGCGCCCCAGCGTGAAAGAACAGGTCGAGTCACTCGGCGCCAAATTCATCGACGTTC CCTATGAAACCGACGAGGAACGCGAGGCCGCCGTCGGCGTGGGCGGCTATGCCAAACCCATGCCGCCCAGCTGGCTGGAG CGGCAAAAGGCCGAAGTGGCCAAACGCGTGGCCCAGGCCGACGTGGTCATCACCACCGCCCTGATTCCAGGCCGCCCCGC CCCCGTGCTGGTGACCGAAGAGATGGTCAAAGCCATGAAGCCCGGCAGCGTGATCGTCGATCTGGCAGCGCCGCAGGGCG GCAACTGCCCGCTGACCGAGCCCGGCCAGACCGTCATCAAGCACGGCGTCACGCTGGTTGGCCAGACCAATGTGCCGGCA CTCGTGGCGGCCGACGCCAGCGCGCTCTACGCCCGCAACCTGATCGACTTCCTCAAGCTCATCATCACGAAAGAGGGCGC CCTGAATGTCGACCTGGAAGACGACATCGTGGCGGCCTGCCTGATGACGCAGGGCGGTGAAGTCAAGCGCAAGTAG
Upstream 100 bases:
>100_bases TCATGTAAGCTTGCCGACAGGTTTAAATTCCCTGTCAGGCTCCTGGGTGAGCTGAAGTAAATAATCGCGCCAAAAAAACT AATCCACTGAGGAGAGACCC
Downstream 100 bases:
>100_bases GCTCTGGCGGCAACGCCAGCAAGAAACAAAACCATTTCGGAATCAATCGGGCCAGCCGGGCCACACCAGTCTCAAGCCCG CTACCGCTACCGCCACCTCA
Product: NAD(P)(+) transhydrogenase
Products: NA
Alternate protein names: Nicotinamide nucleotide transhydrogenase subunit alpha 1; Proton-translocating transhydrogenase component 1; Pyridine nucleotide transhydrogenase subunit alpha 1; dI [H]
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MLIGVPAEITAGETRVAITPETAKKLKAQGHTVRVQSGAGVAASVPDDAYTAVGVEITDAAGAYAADIVLKVRCPVDGEM AHAKAGGVLVGMLNPFDATGLQRLAAAGLTSFALEAAPRTSRAQSMDVLSSQANIAGYKAVMMAAEQYQRFFPMLMTAAG TVKAARVVILGVGVAGLQAIATAKRLGAVIEASDVRPSVKEQVESLGAKFIDVPYETDEEREAAVGVGGYAKPMPPSWLE RQKAEVAKRVAQADVVITTALIPGRPAPVLVTEEMVKAMKPGSVIVDLAAPQGGNCPLTEPGQTVIKHGVTLVGQTNVPA LVAADASALYARNLIDFLKLIITKEGALNVDLEDDIVAACLMTQGGEVKRK
Sequences:
>Translated_371_residues MLIGVPAEITAGETRVAITPETAKKLKAQGHTVRVQSGAGVAASVPDDAYTAVGVEITDAAGAYAADIVLKVRCPVDGEM AHAKAGGVLVGMLNPFDATGLQRLAAAGLTSFALEAAPRTSRAQSMDVLSSQANIAGYKAVMMAAEQYQRFFPMLMTAAG TVKAARVVILGVGVAGLQAIATAKRLGAVIEASDVRPSVKEQVESLGAKFIDVPYETDEEREAAVGVGGYAKPMPPSWLE RQKAEVAKRVAQADVVITTALIPGRPAPVLVTEEMVKAMKPGSVIVDLAAPQGGNCPLTEPGQTVIKHGVTLVGQTNVPA LVAADASALYARNLIDFLKLIITKEGALNVDLEDDIVAACLMTQGGEVKRK >Mature_371_residues MLIGVPAEITAGETRVAITPETAKKLKAQGHTVRVQSGAGVAASVPDDAYTAVGVEITDAAGAYAADIVLKVRCPVDGEM AHAKAGGVLVGMLNPFDATGLQRLAAAGLTSFALEAAPRTSRAQSMDVLSSQANIAGYKAVMMAAEQYQRFFPMLMTAAG TVKAARVVILGVGVAGLQAIATAKRLGAVIEASDVRPSVKEQVESLGAKFIDVPYETDEEREAAVGVGGYAKPMPPSWLE RQKAEVAKRVAQADVVITTALIPGRPAPVLVTEEMVKAMKPGSVIVDLAAPQGGNCPLTEPGQTVIKHGVTLVGQTNVPA LVAADASALYARNLIDFLKLIITKEGALNVDLEDDIVAACLMTQGGEVKRK
Specific function: The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane [H]
COG id: COG3288
COG function: function code C; NAD/NADP transhydrogenase alpha subunit
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AlaDH/PNT family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=363, Percent_Identity=41.3223140495868, Blast_Score=261, Evalue=6e-70, Organism=Homo sapiens, GI122939153, Length=363, Percent_Identity=41.3223140495868, Blast_Score=261, Evalue=6e-70, Organism=Escherichia coli, GI1787887, Length=371, Percent_Identity=45.0134770889488, Blast_Score=304, Evalue=6e-84, Organism=Caenorhabditis elegans, GI17550456, Length=368, Percent_Identity=42.6630434782609, Blast_Score=293, Evalue=9e-80,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007698 - InterPro: IPR008142 - InterPro: IPR008143 - InterPro: IPR007886 [H]
Pfam domain/function: PF01262 AlaDh_PNT_C; PF05222 AlaDh_PNT_N [H]
EC number: =1.6.1.2 [H]
Molecular weight: Translated: 38432; Mature: 38432
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIGVPAEITAGETRVAITPETAKKLKAQGHTVRVQSGAGVAASVPDDAYTAVGVEITDA CEEECCCCCCCCCEEEEECHHHHHHHHCCCCEEEEECCCCEEECCCCCCEEEEEEEEECC AGAYAADIVLKVRCPVDGEMAHAKAGGVLVGMLNPFDATGLQRLAAAGLTSFALEAAPRT CCCEEEEEEEEEECCCCCCCHHCCCCCEEEEECCCCCHHHHHHHHHHCHHHHHHHCCCCC SRAQSMDVLSSQANIAGYKAVMMAAEQYQRFFPMLMTAAGTVKAARVVILGVGVAGLQAI HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEEEECCHHHHHHH ATAKRLGAVIEASDVRPSVKEQVESLGAKFIDVPYETDEEREAAVGVGGYAKPMPPSWLE HHHHHHHHEEECCCCCHHHHHHHHHCCCEEEECCCCCCCCHHHHCCCCCCCCCCCHHHHH RQKAEVAKRVAQADVVITTALIPGRPAPVLVTEEMVKAMKPGSVIVDLAAPQGGNCPLTE HHHHHHHHHHHHCCEEEEEEECCCCCCCEEEHHHHHHHCCCCCEEEEEECCCCCCCCCCC PGQTVIKHGVTLVGQTNVPALVAADASALYARNLIDFLKLIITKEGALNVDLEDDIVAAC CCHHHHHCCCEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHH LMTQGGEVKRK HHCCCCCCCCC >Mature Secondary Structure MLIGVPAEITAGETRVAITPETAKKLKAQGHTVRVQSGAGVAASVPDDAYTAVGVEITDA CEEECCCCCCCCCEEEEECHHHHHHHHCCCCEEEEECCCCEEECCCCCCEEEEEEEEECC AGAYAADIVLKVRCPVDGEMAHAKAGGVLVGMLNPFDATGLQRLAAAGLTSFALEAAPRT CCCEEEEEEEEEECCCCCCCHHCCCCCEEEEECCCCCHHHHHHHHHHCHHHHHHHCCCCC SRAQSMDVLSSQANIAGYKAVMMAAEQYQRFFPMLMTAAGTVKAARVVILGVGVAGLQAI HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEEEECCHHHHHHH ATAKRLGAVIEASDVRPSVKEQVESLGAKFIDVPYETDEEREAAVGVGGYAKPMPPSWLE HHHHHHHHEEECCCCCHHHHHHHHHCCCEEEECCCCCCCCHHHHCCCCCCCCCCCHHHHH RQKAEVAKRVAQADVVITTALIPGRPAPVLVTEEMVKAMKPGSVIVDLAAPQGGNCPLTE HHHHHHHHHHHHCCEEEEEEECCCCCCCEEEHHHHHHHCCCCCEEEEEECCCCCCCCCCC PGQTVIKHGVTLVGQTNVPALVAADASALYARNLIDFLKLIITKEGALNVDLEDDIVAAC CCHHHHHCCCEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHH LMTQGGEVKRK HHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8075801 [H]