Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91790363

Identifier: 91790363

GI number: 91790363

Start: 4792491

End: 4793762

Strand: Reverse

Name: 91790363

Synonym: Bpro_4531

Alternate gene names: NA

Gene position: 4793762-4792491 (Counterclockwise)

Preceding gene: 91790365

Following gene: 91790362

Centisome position: 92.18

GC content: 64.07

Gene sequence:

>1272_bases
ATGTCCTTGTCATTCAATACGTTTTCAAACACTGCGGATCAACCCCTGCCCCTGCGGGCCGGGCGTAACTACCGCTGTCA
ATGTGGCCAGCCGGTCTTTTTCCGCAACAGCAAATGCCTGGCTTGCGGGACCCCGCTGGGCTATGACCCTGAGCGCGGCA
TGTTGCTGCCCCTCATGCCGGGGCCCTGGGAAGGCAGCTGGCGGGAGTGGCAGGCGCAGGCCGCGCCGGTAGCGCCGCCG
CCCGACGACGCGCACCCGCCGTTGCTGCAGGACATCCCGGGGCAGGAATCCGCCAGACCCGAAACGGTGGCGCCTGGGCA
ACGCATTCCCAGGACCGTGTCGGATGGAACGGGTTCGCCGGTGTACAAGCGCTGTCTGAATCTCTCGACACCGGCTTCCT
GCAACTGGCTGATCGCCGTCGAAGACCCGCACAACATGTGCAGGGCCTGCAGGCTGAACCGCACCATCCCTGACCTCACC
GATCCGGCCCTGCCGGACAACGGCTATCTGTGGGGCCAGGTGGAGCTGGCCAAGCGCCGCCTGGTGTCGTCGCTGATCCT
CCTGAAGCTGCCCGTGGCGTCGCGCATGAGCGAGGACCCCGCGCACGGCCTGATGTTTGATTTTTTGCGCTCACCCATGA
ACGGCCCGCACATCGTGACCGGCCACGACACCGGCCTCATCACGCTCAACATTGACGAAGCCGATGATGCCCAACGGGAG
GCGGTGCGCAAAGCCCTGCGCGAACCCTACCGGACGCTGCTGGGGCACTTGCGCCATGAGGTCGGCCACTACTACTGGGG
CCGCCTGATCGCCGGCACGCATTGGCATGAGGGCTTTTGCCGGCTCTTTGGCGATGAGTCCCTGGATTACCTGGCCAGCC
TGCAGCGCAACTACGACGAAGGTCCGCCGCCGGATTGGCCCATGCATTTCGTGAGCGCCTATGCCAGCGCCCACCCGTGG
GAAGACTGGGCCGAATGCTGGGCTCACTACCTGCACATGCGCGATGCGATTGACACCGCACTGAGCTTTGGCCTGAGCGT
GGACCGCTTCGACCTGGAGTTCACGCCCTTCACCCTTGACGCCCTGTATCAGCCGGAGCATCCCGAGGCGGGGCAGTTCC
TGGCATTCCTGAACCACTGGACGCGGCTCACCACCATGCTCAACGAAATGTCGCGCAGCATGGGTCAGCCCGACTTCTAT
CCATTTGCGTTGCCCCTTAATGTGGTGGGAAAACTGCATTTCATCCACCTGGTGGTGACCTCGGGCAGCTGA

Upstream 100 bases:

>100_bases
CCTCGGCCTCAGGCCGCCGCAAGCAAACGTGGGACACTGGATGCGGTTGAAGCGCAGGGCCCTGTACTTCCCTGCACCTC
CCCATTCTCGTTAGCGGGCA

Downstream 100 bases:

>100_bases
CGGGACGGCCGCAGCATGCGTTACAGTGTGCCCACACTGTTTCCATCTTCCATGCCCGGCAAGCCACGTGGCCACCATTA
CAGCGTGTATGTGATCGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 422

Protein sequence:

>423_residues
MSLSFNTFSNTADQPLPLRAGRNYRCQCGQPVFFRNSKCLACGTPLGYDPERGMLLPLMPGPWEGSWREWQAQAAPVAPP
PDDAHPPLLQDIPGQESARPETVAPGQRIPRTVSDGTGSPVYKRCLNLSTPASCNWLIAVEDPHNMCRACRLNRTIPDLT
DPALPDNGYLWGQVELAKRRLVSSLILLKLPVASRMSEDPAHGLMFDFLRSPMNGPHIVTGHDTGLITLNIDEADDAQRE
AVRKALREPYRTLLGHLRHEVGHYYWGRLIAGTHWHEGFCRLFGDESLDYLASLQRNYDEGPPPDWPMHFVSAYASAHPW
EDWAECWAHYLHMRDAIDTALSFGLSVDRFDLEFTPFTLDALYQPEHPEAGQFLAFLNHWTRLTTMLNEMSRSMGQPDFY
PFALPLNVVGKLHFIHLVVTSGS

Sequences:

>Translated_423_residues
MSLSFNTFSNTADQPLPLRAGRNYRCQCGQPVFFRNSKCLACGTPLGYDPERGMLLPLMPGPWEGSWREWQAQAAPVAPP
PDDAHPPLLQDIPGQESARPETVAPGQRIPRTVSDGTGSPVYKRCLNLSTPASCNWLIAVEDPHNMCRACRLNRTIPDLT
DPALPDNGYLWGQVELAKRRLVSSLILLKLPVASRMSEDPAHGLMFDFLRSPMNGPHIVTGHDTGLITLNIDEADDAQRE
AVRKALREPYRTLLGHLRHEVGHYYWGRLIAGTHWHEGFCRLFGDESLDYLASLQRNYDEGPPPDWPMHFVSAYASAHPW
EDWAECWAHYLHMRDAIDTALSFGLSVDRFDLEFTPFTLDALYQPEHPEAGQFLAFLNHWTRLTTMLNEMSRSMGQPDFY
PFALPLNVVGKLHFIHLVVTSGS
>Mature_422_residues
SLSFNTFSNTADQPLPLRAGRNYRCQCGQPVFFRNSKCLACGTPLGYDPERGMLLPLMPGPWEGSWREWQAQAAPVAPPP
DDAHPPLLQDIPGQESARPETVAPGQRIPRTVSDGTGSPVYKRCLNLSTPASCNWLIAVEDPHNMCRACRLNRTIPDLTD
PALPDNGYLWGQVELAKRRLVSSLILLKLPVASRMSEDPAHGLMFDFLRSPMNGPHIVTGHDTGLITLNIDEADDAQREA
VRKALREPYRTLLGHLRHEVGHYYWGRLIAGTHWHEGFCRLFGDESLDYLASLQRNYDEGPPPDWPMHFVSAYASAHPWE
DWAECWAHYLHMRDAIDTALSFGLSVDRFDLEFTPFTLDALYQPEHPEAGQFLAFLNHWTRLTTMLNEMSRSMGQPDFYP
FALPLNVVGKLHFIHLVVTSGS

Specific function: Unknown

COG id: COG4307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011201 [H]

Pfam domain/function: PF10005 DUF2248 [H]

EC number: NA

Molecular weight: Translated: 47664; Mature: 47532

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSFNTFSNTADQPLPLRAGRNYRCQCGQPVFFRNSKCLACGTPLGYDPERGMLLPLMP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEECCCCCCCCCCCEEEECCC
GPWEGSWREWQAQAAPVAPPPDDAHPPLLQDIPGQESARPETVAPGQRIPRTVSDGTGSP
CCCCCCHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
VYKRCLNLSTPASCNWLIAVEDPHNMCRACRLNRTIPDLTDPALPDNGYLWGQVELAKRR
HHHHHHCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEHHHHHHHH
LVSSLILLKLPVASRMSEDPAHGLMFDFLRSPMNGPHIVTGHDTGLITLNIDEADDAQRE
HHHHHHHHHCCHHHHCCCCCCHHHHHHHHHCCCCCCEEEECCCCEEEEEECCCCCHHHHH
AVRKALREPYRTLLGHLRHEVGHYYWGRLIAGTHWHEGFCRLFGDESLDYLASLQRNYDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHCCCC
GPPPDWPMHFVSAYASAHPWEDWAECWAHYLHMRDAIDTALSFGLSVDRFDLEFTPFTLD
CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCEEHH
ALYQPEHPEAGQFLAFLNHWTRLTTMLNEMSRSMGQPDFYPFALPLNVVGKLHFIHLVVT
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHCEEEEEEEEE
SGS
CCC
>Mature Secondary Structure 
SLSFNTFSNTADQPLPLRAGRNYRCQCGQPVFFRNSKCLACGTPLGYDPERGMLLPLMP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEECCCCCCCCCCCEEEECCC
GPWEGSWREWQAQAAPVAPPPDDAHPPLLQDIPGQESARPETVAPGQRIPRTVSDGTGSP
CCCCCCHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
VYKRCLNLSTPASCNWLIAVEDPHNMCRACRLNRTIPDLTDPALPDNGYLWGQVELAKRR
HHHHHHCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEHHHHHHHH
LVSSLILLKLPVASRMSEDPAHGLMFDFLRSPMNGPHIVTGHDTGLITLNIDEADDAQRE
HHHHHHHHHCCHHHHCCCCCCHHHHHHHHHCCCCCCEEEECCCCEEEEEECCCCCHHHHH
AVRKALREPYRTLLGHLRHEVGHYYWGRLIAGTHWHEGFCRLFGDESLDYLASLQRNYDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHCCCC
GPPPDWPMHFVSAYASAHPWEDWAECWAHYLHMRDAIDTALSFGLSVDRFDLEFTPFTLD
CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCEEHH
ALYQPEHPEAGQFLAFLNHWTRLTTMLNEMSRSMGQPDFYPFALPLNVVGKLHFIHLVVT
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHCEEEEEEEEE
SGS
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]