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The map label for this gene is ytfA [H]

Identifier: 91790334

GI number: 91790334

Start: 4757632

End: 4758357

Strand: Reverse

Name: ytfA [H]

Synonym: Bpro_4502

Alternate gene names: 91790334

Gene position: 4758357-4757632 (Counterclockwise)

Preceding gene: 91790335

Following gene: 91790333

Centisome position: 91.5

GC content: 62.12

Gene sequence:

>726_bases
ATGAACGAGTTAGTACATTCCGTCCCCAAGGCCAAAACAGCAATCAAAACAGCAACCAGGCCGGCGGGCAAGGCTGCGAC
CAGAACGGCGGCGAAGACCTCGCCCGTCCCCCGCACCAACGACCCGGCCCGCACCATGGCGGGCATTCTGGAGGTGGCGA
CCGCGGAATTCGCCAACAAGGGCCTGAGCGGCGCGCGCATCGACGAAATTGCGGCGGCCACGCGCACCAGCAAGCGCATG
ATTTACTACTACTTCGGCAGCAAGGAAGGCTTGTACGTCGCGGTACTGGAAGAGTCCTACCGCCGCATGCGCAGCATCGA
GGCCGGCTTGCACCTCGAGGACCTGCCGCCCGAACAGGCCCTGCGCCGGCTGGTGGAGTTCACCTTCGATCACCATCTGG
GCAATCCGGACTACATCCGTCTGGTAATGACCGAGAACATGGAGCGCGGCGCCTACCTGGCGCAAAGCAAGAGCATCCAG
GAGCTCAACGTCCCGGCGATCCAGGCCATCCGCAACCTGTACGAACGCGGCGTGGCTTCCGGCGTGTTCCGGCCCGGGCT
GGATCCGGTGGACATTCATGCGTCCATCTCTGCGCTGACATTTTTCAATGTGTCCAACCAGCACACCTTCGGGCTGATCT
TCAAGCACGACATGCATGCCCCGCAGACGATTGCCACGCGTCGCCAGAACATCGTCGAAATGATTGTGCGATTCGTCCGC
GCCTAG

Upstream 100 bases:

>100_bases
GCTGACGGTTCCGCTGGTGTAAATAACCGGCTGTCGTGCGCTGTCCAACCCTTCCGGATGACCCCTTCCATGTGCTGCAC
CGGCCCTCTATACTTCGGGA

Downstream 100 bases:

>100_bases
CGAGCGACTCCCGGGCAACTGATCGCCGGAATGGCGAACGGTTCAATATCGACTCCCGCGGCCATCCGGGGGCAAGGTGG
CGTTATGTCAAGGAGGACCT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MNELVHSVPKAKTAIKTATRPAGKAATRTAAKTSPVPRTNDPARTMAGILEVATAEFANKGLSGARIDEIAAATRTSKRM
IYYYFGSKEGLYVAVLEESYRRMRSIEAGLHLEDLPPEQALRRLVEFTFDHHLGNPDYIRLVMTENMERGAYLAQSKSIQ
ELNVPAIQAIRNLYERGVASGVFRPGLDPVDIHASISALTFFNVSNQHTFGLIFKHDMHAPQTIATRRQNIVEMIVRFVR
A

Sequences:

>Translated_241_residues
MNELVHSVPKAKTAIKTATRPAGKAATRTAAKTSPVPRTNDPARTMAGILEVATAEFANKGLSGARIDEIAAATRTSKRM
IYYYFGSKEGLYVAVLEESYRRMRSIEAGLHLEDLPPEQALRRLVEFTFDHHLGNPDYIRLVMTENMERGAYLAQSKSIQ
ELNVPAIQAIRNLYERGVASGVFRPGLDPVDIHASISALTFFNVSNQHTFGLIFKHDMHAPQTIATRRQNIVEMIVRFVR
A
>Mature_241_residues
MNELVHSVPKAKTAIKTATRPAGKAATRTAAKTSPVPRTNDPARTMAGILEVATAEFANKGLSGARIDEIAAATRTSKRM
IYYYFGSKEGLYVAVLEESYRRMRSIEAGLHLEDLPPEQALRRLVEFTFDHHLGNPDYIRLVMTENMERGAYLAQSKSIQ
ELNVPAIQAIRNLYERGVASGVFRPGLDPVDIHASISALTFFNVSNQHTFGLIFKHDMHAPQTIATRRQNIVEMIVRFVR
A

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015893
- InterPro:   IPR011075 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26852; Mature: 26852

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNELVHSVPKAKTAIKTATRPAGKAATRTAAKTSPVPRTNDPARTMAGILEVATAEFANK
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
GLSGARIDEIAAATRTSKRMIYYYFGSKEGLYVAVLEESYRRMRSIEAGLHLEDLPPEQA
CCCCCHHHHHHHHHHCCCEEEEEEECCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCHHHH
LRRLVEFTFDHHLGNPDYIRLVMTENMERGAYLAQSKSIQELNVPAIQAIRNLYERGVAS
HHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHCCCHHHCCCHHHHHHHHHHHHHHHH
GVFRPGLDPVDIHASISALTFFNVSNQHTFGLIFKHDMHAPQTIATRRQNIVEMIVRFVR
CCCCCCCCCEEHHHHEEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
A
C
>Mature Secondary Structure
MNELVHSVPKAKTAIKTATRPAGKAATRTAAKTSPVPRTNDPARTMAGILEVATAEFANK
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
GLSGARIDEIAAATRTSKRMIYYYFGSKEGLYVAVLEESYRRMRSIEAGLHLEDLPPEQA
CCCCCHHHHHHHHHHCCCEEEEEEECCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCHHHH
LRRLVEFTFDHHLGNPDYIRLVMTENMERGAYLAQSKSIQELNVPAIQAIRNLYERGVAS
HHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHCCCHHHCCCHHHHHHHHHHHHHHHH
GVFRPGLDPVDIHASISALTFFNVSNQHTFGLIFKHDMHAPQTIATRRQNIVEMIVRFVR
CCCCCCCCCEEHHHHEEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]