Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91789194
Identifier: 91789194
GI number: 91789194
Start: 3534402
End: 3535262
Strand: Direct
Name: 91789194
Synonym: Bpro_3338
Alternate gene names: NA
Gene position: 3534402-3535262 (Clockwise)
Preceding gene: 91789193
Following gene: 91789195
Centisome position: 67.97
GC content: 58.19
Gene sequence:
>861_bases ATGCGAAATAGCAAACCCCATTACCGAACTGCCATGACTTATTGCACTGCCATCAAACTGAATGCCGGTCTGGTCTTTTT GTCGGATTCCCGCACCAATGCCGGACTCGACCACATCAGCACCTTCCGCAAGATGATCGTCTACGAAAAGGCCGGCGACC GTTTCATGGTGCTGCTGACCGCCGGCAACCTCTCCATCTCGCAGTCGGTGCGCGAGATTCTCCAGATCGAGCACCTGAAG GACCCGGAAACCGGCGAATCCATCACCATCTGGAACGCCAAGAGCATGTTCGATGCCGCCCGCGTGCTGGGCTCGGCGAT ACGCCGCGTCTATGACCGCGATGCCGACGCGCTGCGAAAGGCGGATGTCGATTTCAATGTCTCGCTGATCTTCGGCGGCC AGATTCGCGGTGAAGGCATGCGCCTGTTCCAGATGTACTCGGCCGGCAACTTCATTGAAGCGACGGGTGAAACGCCCTAC TTCCAGGTGGGCGAATCGAAATACGGCAAGCCCGTGCTCGACCGCGTCATCACCCCCGAGACGCCGCTGGCCGAAGCCGC CAAATGCGCGCTGGTGTCGATGGACTCGACCATGAAATCCAATCTCTCGGTGGGCATGCCACTGGACCTGGTGGTGTACG AGGTGGACACCTTCCAGAGCGACAAGGTGGTGTGCATCGACAGCAGCAACCCCTATTACTCGATGCTGCACAACAATTGG GGCAGACGGTTGCGCGAGGTGTTCGACAGCATTGAAGACCCAGTATGGGACGACGCGCACACCGACATCCCGCTGAAAAT GCCGGCAAACCGCCACGAACCGCTCAAGAAAATCAGCAGTCCCAGCGAAAAGCTGATTTAA
Upstream 100 bases:
>100_bases GCTTGACAGGGCATTGGATACGATAGACCCTGACACCCTGAGCCCCCGTGAGGCGCTGGATGCGCTCTACCAGCTGAAAA AGCTGTCGGCGCTGGCTTGA
Downstream 100 bases:
>100_bases ATCCGTGCCGTCTTCTACCTCCTCGACCTCGTCTACCTTCCCTGCCAAACCCCTGGTCATCTTCTCGCACGGCAACAGCT TTCCCGCCAGCACCTACAGC
Product: 20S proteasome subunits A/B
Products: NA
Alternate protein names: Proteasome-Type Protease; 20S Proteasome A/B Subunit; Peptidase T1 Family; 20S Proteasome A And Subunit Bs; Peptidase T1A Family; T1 Family Peptidase; 20S Proteasome Subunits A/B; A And B-Type Proteasome Family Protein; Proteasome-Type Protease-Like Protein; Proteasome Protease; T1A Family Peptidase; Proteasome A-Type And B-Type Family Protein; Proteasome Alpha-1 Subunit; 20S Proteasome A And B Subunit
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MRNSKPHYRTAMTYCTAIKLNAGLVFLSDSRTNAGLDHISTFRKMIVYEKAGDRFMVLLTAGNLSISQSVREILQIEHLK DPETGESITIWNAKSMFDAARVLGSAIRRVYDRDADALRKADVDFNVSLIFGGQIRGEGMRLFQMYSAGNFIEATGETPY FQVGESKYGKPVLDRVITPETPLAEAAKCALVSMDSTMKSNLSVGMPLDLVVYEVDTFQSDKVVCIDSSNPYYSMLHNNW GRRLREVFDSIEDPVWDDAHTDIPLKMPANRHEPLKKISSPSEKLI
Sequences:
>Translated_286_residues MRNSKPHYRTAMTYCTAIKLNAGLVFLSDSRTNAGLDHISTFRKMIVYEKAGDRFMVLLTAGNLSISQSVREILQIEHLK DPETGESITIWNAKSMFDAARVLGSAIRRVYDRDADALRKADVDFNVSLIFGGQIRGEGMRLFQMYSAGNFIEATGETPY FQVGESKYGKPVLDRVITPETPLAEAAKCALVSMDSTMKSNLSVGMPLDLVVYEVDTFQSDKVVCIDSSNPYYSMLHNNW GRRLREVFDSIEDPVWDDAHTDIPLKMPANRHEPLKKISSPSEKLI >Mature_286_residues MRNSKPHYRTAMTYCTAIKLNAGLVFLSDSRTNAGLDHISTFRKMIVYEKAGDRFMVLLTAGNLSISQSVREILQIEHLK DPETGESITIWNAKSMFDAARVLGSAIRRVYDRDADALRKADVDFNVSLIFGGQIRGEGMRLFQMYSAGNFIEATGETPY FQVGESKYGKPVLDRVITPETPLAEAAKCALVSMDSTMKSNLSVGMPLDLVVYEVDTFQSDKVVCIDSSNPYYSMLHNNW GRRLREVFDSIEDPVWDDAHTDIPLKMPANRHEPLKKISSPSEKLI
Specific function: Unknown
COG id: COG3484
COG function: function code O; Predicted proteasome-type protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32114; Mature: 32114
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNSKPHYRTAMTYCTAIKLNAGLVFLSDSRTNAGLDHISTFRKMIVYEKAGDRFMVLLT CCCCCCCHHHHHHHHEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHEECCCEEEEEEE AGNLSISQSVREILQIEHLKDPETGESITIWNAKSMFDAARVLGSAIRRVYDRDADALRK ECCCCHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHH ADVDFNVSLIFGGQIRGEGMRLFQMYSAGNFIEATGETPYFQVGESKYGKPVLDRVITPE CCCCEEEEEEECCEECCCCEEEEEEECCCCEEEECCCCCEEEECCCCCCCHHHHHHCCCC TPLAEAAKCALVSMDSTMKSNLSVGMPLDLVVYEVDTFQSDKVVCIDSSNPYYSMLHNNW CCHHHHHHEEEEECCHHHHCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCHHHHHHHH GRRLREVFDSIEDPVWDDAHTDIPLKMPANRHEPLKKISSPSEKLI HHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCHHHHHHCCCHHHCC >Mature Secondary Structure MRNSKPHYRTAMTYCTAIKLNAGLVFLSDSRTNAGLDHISTFRKMIVYEKAGDRFMVLLT CCCCCCCHHHHHHHHEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHEECCCEEEEEEE AGNLSISQSVREILQIEHLKDPETGESITIWNAKSMFDAARVLGSAIRRVYDRDADALRK ECCCCHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHH ADVDFNVSLIFGGQIRGEGMRLFQMYSAGNFIEATGETPYFQVGESKYGKPVLDRVITPE CCCCEEEEEEECCEECCCCEEEEEEECCCCEEEECCCCCEEEECCCCCCCHHHHHHCCCC TPLAEAAKCALVSMDSTMKSNLSVGMPLDLVVYEVDTFQSDKVVCIDSSNPYYSMLHNNW CCHHHHHHEEEEECCHHHHCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCHHHHHHHH GRRLREVFDSIEDPVWDDAHTDIPLKMPANRHEPLKKISSPSEKLI HHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCHHHHHHCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA