Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91789163
Identifier: 91789163
GI number: 91789163
Start: 3502843
End: 3503349
Strand: Direct
Name: 91789163
Synonym: Bpro_3306
Alternate gene names: NA
Gene position: 3502843-3503349 (Clockwise)
Preceding gene: 91789162
Following gene: 91789164
Centisome position: 67.36
GC content: 71.79
Gene sequence:
>507_bases ATGAACAGACCGCAGACCCTGAACCGGGACGACATCGCCCGCCGCATTCCGCATCAAGGCAGCATGTGCCTGCTCGACAC CGTCACGGCCTGGGACGACAGCCACATCCGTTGCCAGGCCAGCAGCCACCGCGCGCCCGACCACCCGCTGCGGGCCCATG GCCGGCTGGGAGCGGCCTGCGGGGTGGAATATGCGGCGCAAGCCATGGCGGTGCACGGCACCCTGATGGCCGAGGCGGCT GCGGGCACTGCCGGCGGCAGCACAGCACCGCGCGCCGGCTACCTGGCCAGCATGCGCAGCGTGAACCTGTACGTCGACCG GCTGGACACGGTGCCCGGCCCCCTGACGGTCAGCGCGGAGCGGATGACCGGGGACGCCAACACCGTGCTGTACAGCTTCA CGGTTCAGGCCGGCGCCCAGACCCTGCTCAGCGGGCGCGCGGTTGTCGTGCTCGATGCGGCCCTGCTGCCGAGTCCCGTC AACAGCAGCGGCGGCAGCGCGGGCTGA
Upstream 100 bases:
>100_bases GCGCCTTGCCCCTGCTGCAGGCTCTTGCCCAGCAGCAGGCGGCGGCGCTGGTTCTGGATTACCTGGACGGCACGCAACTG GCGCTGGAAGTCGCGCCGCC
Downstream 100 bases:
>100_bases ACCAGCCGGCCCTTCAAGGACACCTTCATGACCCCTCCCCTCAAACGCGCACTTGTCACCGGCGGCAGCGGCGGCATCGG CTCGGCCATCTGCCGGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Potential 3-Hydroxydecyl-(Acyl Carrier Protein) Dehydratase; Beta-Hydroxyacyl-Acyl Carrier Protein-Dehydratase; 3-Oxoacyl-[Acyl-Carrier-Protein] Reductase; XanthomoNADin Biosynthesis Protein; -Hydroxymyristoyl-Acyl-Carrier-Protein Dehydratase; 3-Oxoacyl-[Acyl-Carrier Protein] Reductase; 3-Hydroxylacyl-(Acyl Carrier Protein) Dehydratase-Like
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MNRPQTLNRDDIARRIPHQGSMCLLDTVTAWDDSHIRCQASSHRAPDHPLRAHGRLGAACGVEYAAQAMAVHGTLMAEAA AGTAGGSTAPRAGYLASMRSVNLYVDRLDTVPGPLTVSAERMTGDANTVLYSFTVQAGAQTLLSGRAVVVLDAALLPSPV NSSGGSAG
Sequences:
>Translated_168_residues MNRPQTLNRDDIARRIPHQGSMCLLDTVTAWDDSHIRCQASSHRAPDHPLRAHGRLGAACGVEYAAQAMAVHGTLMAEAA AGTAGGSTAPRAGYLASMRSVNLYVDRLDTVPGPLTVSAERMTGDANTVLYSFTVQAGAQTLLSGRAVVVLDAALLPSPV NSSGGSAG >Mature_168_residues MNRPQTLNRDDIARRIPHQGSMCLLDTVTAWDDSHIRCQASSHRAPDHPLRAHGRLGAACGVEYAAQAMAVHGTLMAEAA AGTAGGSTAPRAGYLASMRSVNLYVDRLDTVPGPLTVSAERMTGDANTVLYSFTVQAGAQTLLSGRAVVVLDAALLPSPV NSSGGSAG
Specific function: Unknown
COG id: COG4706
COG function: function code I; Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17409; Mature: 17409
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRPQTLNRDDIARRIPHQGSMCLLDTVTAWDDSHIRCQASSHRAPDHPLRAHGRLGAAC CCCCCCCCHHHHHHHCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCHH GVEYAAQAMAVHGTLMAEAAAGTAGGSTAPRAGYLASMRSVNLYVDRLDTVPGPLTVSAE HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHEEEEEECCCCCCCEEEEHH RMTGDANTVLYSFTVQAGAQTLLSGRAVVVLDAALLPSPVNSSGGSAG HCCCCCCEEEEEEEEHHHHHHHHCCCEEEEEEHHHCCCCCCCCCCCCC >Mature Secondary Structure MNRPQTLNRDDIARRIPHQGSMCLLDTVTAWDDSHIRCQASSHRAPDHPLRAHGRLGAAC CCCCCCCCHHHHHHHCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCHH GVEYAAQAMAVHGTLMAEAAAGTAGGSTAPRAGYLASMRSVNLYVDRLDTVPGPLTVSAE HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHEEEEEECCCCCCCEEEEHH RMTGDANTVLYSFTVQAGAQTLLSGRAVVVLDAALLPSPVNSSGGSAG HCCCCCCEEEEEEEEHHHHHHHHCCCEEEEEEHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA