Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is nasE [H]
Identifier: 91789138
GI number: 91789138
Start: 3472802
End: 3473188
Strand: Direct
Name: nasE [H]
Synonym: Bpro_3278
Alternate gene names: 91789138
Gene position: 3472802-3473188 (Clockwise)
Preceding gene: 91789137
Following gene: 91789139
Centisome position: 66.78
GC content: 64.08
Gene sequence:
>387_bases ATGAGTGAATGGAAAAAAATCTGTCTGGTCAATGACATCCCGGTGCTGGGCTCGCGTCGCGTGGCGCGTGCAAAAGGCAT GGATGTGGCCGTGTTTCGCAATGACGAAGACGTCGTGTTCGCCCTGCTGGACCGTTGCCCGCACAAGGGCGGCCCGTTGA GCCAGGGCATCGTGTTCGGCACCAGCGTGGCCTGCCCGCTGCACAACTGGACGATCGGCCTGGCCGACGGCTGCGCCAGG GCACCGGATGTCGGCTGCACCCAGAAATTCAGCGTCCATGTCGCGGATGGTGTGGTGCACCTGGACGCCACCGAACTGGC AACATTGGCCCTGGAGCAGCAGGCCGTCGTGGCCGGTCCCGCCAGCAAAGTGCTTGCCGGCGCATGA
Upstream 100 bases:
>100_bases ACTGATGTCTGATGTGTTTGTGACCAGCGAAAATCTGCTGAGCGTCATGGACCGCGTCACCAGCCTGTACACCAACCTCA AAACATAAAGAGTGGTCGCC
Downstream 100 bases:
>100_bases TTGTTGATGTGAATGCCAAAGAAGCCCGGTCGACCTGCCCCTGCCGCGATAGTGCCGCTGCCGTGGCCGATCGCCTGGCG ACAAGCTTGAAACACCTCCG
Product: assimilatory nitrite reductase (NAD(P)H) small subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MSEWKKICLVNDIPVLGSRRVARAKGMDVAVFRNDEDVVFALLDRCPHKGGPLSQGIVFGTSVACPLHNWTIGLADGCAR APDVGCTQKFSVHVADGVVHLDATELATLALEQQAVVAGPASKVLAGA
Sequences:
>Translated_128_residues MSEWKKICLVNDIPVLGSRRVARAKGMDVAVFRNDEDVVFALLDRCPHKGGPLSQGIVFGTSVACPLHNWTIGLADGCAR APDVGCTQKFSVHVADGVVHLDATELATLALEQQAVVAGPASKVLAGA >Mature_127_residues SEWKKICLVNDIPVLGSRRVARAKGMDVAVFRNDEDVVFALLDRCPHKGGPLSQGIVFGTSVACPLHNWTIGLADGCARA PDVGCTQKFSVHVADGVVHLDATELATLALEQQAVVAGPASKVLAGA
Specific function: Required for nitrite assimilation. Required for activity of the reductase [H]
COG id: COG2146
COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Rieske domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012748 - InterPro: IPR017941 [H]
Pfam domain/function: PF00355 Rieske [H]
EC number: =1.7.1.4 [H]
Molecular weight: Translated: 13419; Mature: 13287
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEWKKICLVNDIPVLGSRRVARAKGMDVAVFRNDEDVVFALLDRCPHKGGPLSQGIVFG CCCCCEEEEECCCCCCCCCCCHHHCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCEEEC TSVACPLHNWTIGLADGCARAPDVGCTQKFSVHVADGVVHLDATELATLALEQQAVVAGP CEEECCCCCCEEECCCCCCCCCCCCCCCEEEEEEECCEEEECHHHHHHHHHHCCEEEECC ASKVLAGA CHHHCCCC >Mature Secondary Structure SEWKKICLVNDIPVLGSRRVARAKGMDVAVFRNDEDVVFALLDRCPHKGGPLSQGIVFG CCCCEEEEECCCCCCCCCCCHHHCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCEEEC TSVACPLHNWTIGLADGCARAPDVGCTQKFSVHVADGVVHLDATELATLALEQQAVVAGP CEEECCCCCCEEECCCCCCCCCCCCCCCEEEEEEECCEEEECHHHHHHHHHHCCEEEECC ASKVLAGA CHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7868621; 8969502; 9384377 [H]