Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is mdtP [H]

Identifier: 91789096

GI number: 91789096

Start: 3424927

End: 3426369

Strand: Reverse

Name: mdtP [H]

Synonym: Bpro_3236

Alternate gene names: 91789096

Gene position: 3426369-3424927 (Counterclockwise)

Preceding gene: 91789097

Following gene: 91789095

Centisome position: 65.89

GC content: 67.64

Gene sequence:

>1443_bases
ATGGCCCTGGTAACGGCGGCCGGCCTGGTGGCTGCAAGCCTGATGGCCACGGGCCTCACCGGCTGCGCCGACATGTCCGG
CATCGCGCCGCAGTCCAGCCTGCGCGATGCGCCTTCGCTGGGCCTGAACGCCGATGCGGCAGCAGGGCAGGCAGGCGTTG
CCGCCGAGTGGTGGCGCGACTTTGGCGACGAGCAGCTCAATGGCCTGATTGCCCAGGCGCTGCAAAGCAGCCCCAGCCTG
AAGCTTGCACAGGCCCGCCTGGCACGGGCCCGGGCCGTGATGGAAGTGGCGGATGCCGCCACTTTGCCGCAGCTCAATGG
CCAGATCGACCTGACACGGCAGCGCTACACCGCTAACGGCGCGGTGCCCCCACCGCTGGCGGGCGCCATCCGCGACAGCG
GCACGGTTCAGCTCAACGCCAGCTGGGAACTTGATTTCTTTGGAAAAAACCGAGCCGCACTGGATGCCGCCCTGGGCAGC
GCCCATGCGGCCGAGGCCGACGCACAGGCCGCGCGCGTGCTGCTTGCCAGCAATGTAGCCCGCAGCTACTTTCAGCTGGC
TCGCCTCCACGAGCAGGCCTTTGTTGCGCGCCGCACGCTGGCGCAGCGGGAAGAAACCCTCAAGCTGGTGCAGGACCGCG
TGGCCGCCGGGCTCGACACCCGGCTCGAGTTGCGCCAGAGCGAGGGCGGCCTGCCGGAGGCGCGCCTGCAACTGGAGACG
GTGCAGGAGCAGATCGCGCTGACGCGCAACGCACTGGCTGCCCTGGTTGGGCAAGCCGGCAGCAGCGCCCTGGCCCAGAA
TCCACCCGCATTGGCAGCAATCAAAAACGTTGCGTTAACGTCCAGCATTCCGGCCGACCTGCTGGGCCGCCGGGCCGACA
TTGCCGCCGCGCGCTGGCGTGTCGAAGCTGCGTCCAAAGATGTGGTGAATGCGAAGACACAGTTCTATCCCAATATCAAC
CTGGTTGCCTTCGCCGGTTTTTCCAGCATTGGCCTGGGCCGTCTGCTTGACGCCGGCAGCCAGCAGTGGGGCGTAGGCCC
GGCGCTGCGCCTGCCGATTTTTGATGCGGGCCGGCTGCGCGCCAACCTGCGCGGCAAGACCGCCGACCTTGATGCCGCCG
TCGAAAGCTACAACGCCGCCGTGATTGATGCGGTGCGTGACGTGGCCGACCAGGTAGCCTCATCGCAGGCCATTGGTCGT
CAGCAGGCCGAGCAGCGGTCCGCGCAGGAGGCCGCAGAGGGCGCTTACGAGATTGCCGTGCAGCGTTACAGGGCTGGCCT
GGGCAACTACCTCAATGTGCTGACGGCCGAAACCAGTGTGCTGACCCAGCGCCGCCTGGCGGTTGACCTGGCCGCCCGCG
CGCTGGACACGCAGGTAGCGCTGATGCGCGCACTGGGTGGTGGTTACACGCCAACGTCGGCAACCGCTTCCCAAACGCTA
TAA

Upstream 100 bases:

>100_bases
GAGAAGTGAAACAAACGCCTCTTTACCTTCAATAACCGGCCCGGTGACTGCGCCCGCGGGCAGGTCGAAGCGTTTGCCGC
TCTGGCATGCGTCCGTACGC

Downstream 100 bases:

>100_bases
AAACCCGTAGCTTCTTTCGCCCGTGTTTGTTGGGCCAGAGGCCTGGTAGACCTAATTGACCTAATTGACTTAATTGATCA
GGAACATCATGACAACTCCA

Product: RND efflux system outer membrane lipoprotein NodT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 480; Mature: 479

Protein sequence:

>480_residues
MALVTAAGLVAASLMATGLTGCADMSGIAPQSSLRDAPSLGLNADAAAGQAGVAAEWWRDFGDEQLNGLIAQALQSSPSL
KLAQARLARARAVMEVADAATLPQLNGQIDLTRQRYTANGAVPPPLAGAIRDSGTVQLNASWELDFFGKNRAALDAALGS
AHAAEADAQAARVLLASNVARSYFQLARLHEQAFVARRTLAQREETLKLVQDRVAAGLDTRLELRQSEGGLPEARLQLET
VQEQIALTRNALAALVGQAGSSALAQNPPALAAIKNVALTSSIPADLLGRRADIAAARWRVEAASKDVVNAKTQFYPNIN
LVAFAGFSSIGLGRLLDAGSQQWGVGPALRLPIFDAGRLRANLRGKTADLDAAVESYNAAVIDAVRDVADQVASSQAIGR
QQAEQRSAQEAAEGAYEIAVQRYRAGLGNYLNVLTAETSVLTQRRLAVDLAARALDTQVALMRALGGGYTPTSATASQTL

Sequences:

>Translated_480_residues
MALVTAAGLVAASLMATGLTGCADMSGIAPQSSLRDAPSLGLNADAAAGQAGVAAEWWRDFGDEQLNGLIAQALQSSPSL
KLAQARLARARAVMEVADAATLPQLNGQIDLTRQRYTANGAVPPPLAGAIRDSGTVQLNASWELDFFGKNRAALDAALGS
AHAAEADAQAARVLLASNVARSYFQLARLHEQAFVARRTLAQREETLKLVQDRVAAGLDTRLELRQSEGGLPEARLQLET
VQEQIALTRNALAALVGQAGSSALAQNPPALAAIKNVALTSSIPADLLGRRADIAAARWRVEAASKDVVNAKTQFYPNIN
LVAFAGFSSIGLGRLLDAGSQQWGVGPALRLPIFDAGRLRANLRGKTADLDAAVESYNAAVIDAVRDVADQVASSQAIGR
QQAEQRSAQEAAEGAYEIAVQRYRAGLGNYLNVLTAETSVLTQRRLAVDLAARALDTQVALMRALGGGYTPTSATASQTL
>Mature_479_residues
ALVTAAGLVAASLMATGLTGCADMSGIAPQSSLRDAPSLGLNADAAAGQAGVAAEWWRDFGDEQLNGLIAQALQSSPSLK
LAQARLARARAVMEVADAATLPQLNGQIDLTRQRYTANGAVPPPLAGAIRDSGTVQLNASWELDFFGKNRAALDAALGSA
HAAEADAQAARVLLASNVARSYFQLARLHEQAFVARRTLAQREETLKLVQDRVAAGLDTRLELRQSEGGLPEARLQLETV
QEQIALTRNALAALVGQAGSSALAQNPPALAAIKNVALTSSIPADLLGRRADIAAARWRVEAASKDVVNAKTQFYPNINL
VAFAGFSSIGLGRLLDAGSQQWGVGPALRLPIFDAGRLRANLRGKTADLDAAVESYNAAVIDAVRDVADQVASSQAIGRQ
QAEQRSAQEAAEGAYEIAVQRYRAGLGNYLNVLTAETSVLTQRRLAVDLAARALDTQVALMRALGGGYTPTSATASQTL

Specific function: Could be involved in resistance to puromycin, acriflavine and tetraphenylarsonium chloride [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI2367348, Length=466, Percent_Identity=32.4034334763949, Blast_Score=190, Evalue=2e-49,
Organism=Escherichia coli, GI1786785, Length=467, Percent_Identity=31.0492505353319, Blast_Score=174, Evalue=1e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010131 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 50202; Mature: 50071

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALVTAAGLVAASLMATGLTGCADMSGIAPQSSLRDAPSLGLNADAAAGQAGVAAEWWRD
CCCHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHC
FGDEQLNGLIAQALQSSPSLKLAQARLARARAVMEVADAATLPQLNGQIDLTRQRYTANG
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHEEECCC
AVPPPLAGAIRDSGTVQLNASWELDFFGKNRAALDAALGSAHAAEADAQAARVLLASNVA
CCCCCCHHHHCCCCEEEEECEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
RSYFQLARLHEQAFVARRTLAQREETLKLVQDRVAAGLDTRLELRQSEGGLPEARLQLET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHH
VQEQIALTRNALAALVGQAGSSALAQNPPALAAIKNVALTSSIPADLLGRRADIAAARWR
HHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHH
VEAASKDVVNAKTQFYPNINLVAFAGFSSIGLGRLLDAGSQQWGVGPALRLPIFDAGRLR
HHHHCCHHHCCHHHCCCCCCEEEECCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCHHH
ANLRGKTADLDAAVESYNAAVIDAVRDVADQVASSQAIGRQQAEQRSAQEAAEGAYEIAV
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRYRAGLGNYLNVLTAETSVLTQRRLAVDLAARALDTQVALMRALGGGYTPTSATASQTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ALVTAAGLVAASLMATGLTGCADMSGIAPQSSLRDAPSLGLNADAAAGQAGVAAEWWRD
CCHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHC
FGDEQLNGLIAQALQSSPSLKLAQARLARARAVMEVADAATLPQLNGQIDLTRQRYTANG
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHEEECCC
AVPPPLAGAIRDSGTVQLNASWELDFFGKNRAALDAALGSAHAAEADAQAARVLLASNVA
CCCCCCHHHHCCCCEEEEECEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
RSYFQLARLHEQAFVARRTLAQREETLKLVQDRVAAGLDTRLELRQSEGGLPEARLQLET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHH
VQEQIALTRNALAALVGQAGSSALAQNPPALAAIKNVALTSSIPADLLGRRADIAAARWR
HHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHH
VEAASKDVVNAKTQFYPNINLVAFAGFSSIGLGRLLDAGSQQWGVGPALRLPIFDAGRLR
HHHHCCHHHCCHHHCCCCCCEEEECCCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCHHH
ANLRGKTADLDAAVESYNAAVIDAVRDVADQVASSQAIGRQQAEQRSAQEAAEGAYEIAV
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRYRAGLGNYLNVLTAETSVLTQRRLAVDLAARALDTQVALMRALGGGYTPTSATASQTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]