Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91789087
Identifier: 91789087
GI number: 91789087
Start: 3417282
End: 3417719
Strand: Reverse
Name: 91789087
Synonym: Bpro_3227
Alternate gene names: NA
Gene position: 3417719-3417282 (Counterclockwise)
Preceding gene: 91789089
Following gene: 91789085
Centisome position: 65.72
GC content: 59.13
Gene sequence:
>438_bases ATGTACAAGCGGATTTTGCTGGCGTACGACGGCTCCAAGTCCGGGCAAAAAGCGTTGCTCGACTGCCGGGACATTGCGCA GTGGAGCCAGGCGTCAGTGAACCTGATTGCCGTCACGCCGCTCTACATGCAGGTGATGGGCGTCGAAGGCGGCATTTACG ACAGCGGCCTTGCCGAGCAGGAGAAAGAAAAGTACCAGGGCATTCTGGATGAAGGTTTGCGCCAGTTGGTCAGCGCCGGC TACCAGGCCCGTGGGGAGGTTCTGCTGGGTGAAACCGTCGATGAAATCACCAAATATGCCAAGAAGATCGAGGCCGATCT GATCGTGGTGGGCCACAAGCATCTGGATGGGTGGGCTGCCCGCTGGTGGCGGGGCTCGGTTTCCAAATCGCTGATCGAGC ACGCACCCTGCAGTGTGCTCGTGGTCATCGTTCACTGA
Upstream 100 bases:
>100_bases GTGCGCCTGGCGTGGCAGCGACCGGGCGGTGTAGTTGCATGGCGCCACCGGAAGGTCTATGCTTGAAACTGCACGAGTCA CTCTAGTCAGGAGGTGCACC
Downstream 100 bases:
>100_bases CCCGCTGAGTCTGCAGCTCTGCGCTGGTCTTAGCGTCCCCGCGCCTGGTGAGGCACCACGGTGTGCCGCTGGCCGGTCTG CGGCCTCGTCGGCTGGTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: UspA Domain Protein; Universal Stress Family Protein; Universal Stress Protein
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MYKRILLAYDGSKSGQKALLDCRDIAQWSQASVNLIAVTPLYMQVMGVEGGIYDSGLAEQEKEKYQGILDEGLRQLVSAG YQARGEVLLGETVDEITKYAKKIEADLIVVGHKHLDGWAARWWRGSVSKSLIEHAPCSVLVVIVH
Sequences:
>Translated_145_residues MYKRILLAYDGSKSGQKALLDCRDIAQWSQASVNLIAVTPLYMQVMGVEGGIYDSGLAEQEKEKYQGILDEGLRQLVSAG YQARGEVLLGETVDEITKYAKKIEADLIVVGHKHLDGWAARWWRGSVSKSLIEHAPCSVLVVIVH >Mature_145_residues MYKRILLAYDGSKSGQKALLDCRDIAQWSQASVNLIAVTPLYMQVMGVEGGIYDSGLAEQEKEKYQGILDEGLRQLVSAG YQARGEVLLGETVDEITKYAKKIEADLIVVGHKHLDGWAARWWRGSVSKSLIEHAPCSVLVVIVH
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16045; Mature: 16045
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKRILLAYDGSKSGQKALLDCRDIAQWSQASVNLIAVTPLYMQVMGVEGGIYDSGLAEQ CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCCCCCCHH EKEKYQGILDEGLRQLVSAGYQARGEVLLGETVDEITKYAKKIEADLIVVGHKHLDGWAA HHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHCCCEEEEECCCCCHHHH RWWRGSVSKSLIEHAPCSVLVVIVH HHHCCHHHHHHHHHCCCEEEEEEEC >Mature Secondary Structure MYKRILLAYDGSKSGQKALLDCRDIAQWSQASVNLIAVTPLYMQVMGVEGGIYDSGLAEQ CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCCCCCCHH EKEKYQGILDEGLRQLVSAGYQARGEVLLGETVDEITKYAKKIEADLIVVGHKHLDGWAA HHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHCCCEEEEECCCCCHHHH RWWRGSVSKSLIEHAPCSVLVVIVH HHHCCHHHHHHHHHCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA