Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789054

Identifier: 91789054

GI number: 91789054

Start: 3378407

End: 3379363

Strand: Reverse

Name: 91789054

Synonym: Bpro_3194

Alternate gene names: NA

Gene position: 3379363-3378407 (Counterclockwise)

Preceding gene: 91789057

Following gene: 91789053

Centisome position: 64.98

GC content: 60.82

Gene sequence:

>957_bases
TTGTCTGCTGTTTATGCGCTTACCCTGGCCGTCACGGCAGGTCCCGCATGGTCGCAGGCGTATCCCAACAAGGTCATCAA
GCTGCAGGTGCCGTTTGCACCTGGCGGCACGACCGACATCGTGGGGCGCGTGATTGCCGAGCCACTGGGCAAGGCGCTGG
GCCAGACCGTCATCATCGAGAACAAGGCAGGCGGAGGCGGCGTGATCGGCGCCACTGAAACAGCCCGTGCCGTGCCTGAT
GGCTATTCGCTCGGCATGGCCACGGTGTCCACTACCGCAGCCAACCCGGCCATCAACCCCAAGGTTCCGTACAACCCGCT
GACGGACTTCACGCCCATCATCAACATTGCAGCGACCCCCAACATCATTGCGGTGCACCCCAGCTTTCCCGCGAGGACCT
ACAAGGAGTTTGTCGCGGAACTCAAGAAGAACCCCGGTAAATACTCGTATGCGTCATCAGGCACGGGCGGCATTGGCCAC
CTGCAGATGGAGCTGTACAAAAACCTGAGCGGCACCTTTGTGACGCACATTCCGTACCGCGGCGCGGGGCCGGCCTTGAA
CGATACGGTGGCGGGCCAGGTGCCCATCATTTTTGACAACATTCCTTCGGCCTTGCCGTTCATCCAGCAAAAGCGCCTGA
TTCCGATTGTGGTGGCCGCACCGCAGCGCCTGGCGGCGCTGCCCGATGTACCAACTTTCAAGGAGGTGGGCCTGGAGCCG
GTGAACCGCATGGCGTATTACGGCATTCTGGGCCCCAAGGGCCTGCCGAAAGAAGTGGTTGACAAGGTCAGCGCGGGGGT
GAAGAAGGCGCTGGAAGATCCGGCCGTGCGCAAGCGCATTGAAGACACCGGCTCACTGGTCATTGCCAACACACCCGAGC
AGTTTGCGGTGCAAATCAAGGCCGAGTACGAGGTGTATAAAAAGGTGGTCGATACGGCCAAGCTCAAGCTGGAGTGA

Upstream 100 bases:

>100_bases
TATGCGTAATCCACAGCAGGCAGGCATGTGGCTTGCGTATACCATTCCATCTGTTTTGATTTTGAAGGACTTCACCATGC
AACGTCGTTATCTGTTTGCC

Downstream 100 bases:

>100_bases
GCCGGGGCTTCGGGCCATCAACCGCAAGCCGCCTTCGGGCGGCTTGTTGCGTTTTTGGCATGTTGACGCCCGGCAGCCCG
CAGGAAATCCATTTCCAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MSAVYALTLAVTAGPAWSQAYPNKVIKLQVPFAPGGTTDIVGRVIAEPLGKALGQTVIIENKAGGGGVIGATETARAVPD
GYSLGMATVSTTAANPAINPKVPYNPLTDFTPIINIAATPNIIAVHPSFPARTYKEFVAELKKNPGKYSYASSGTGGIGH
LQMELYKNLSGTFVTHIPYRGAGPALNDTVAGQVPIIFDNIPSALPFIQQKRLIPIVVAAPQRLAALPDVPTFKEVGLEP
VNRMAYYGILGPKGLPKEVVDKVSAGVKKALEDPAVRKRIEDTGSLVIANTPEQFAVQIKAEYEVYKKVVDTAKLKLE

Sequences:

>Translated_318_residues
MSAVYALTLAVTAGPAWSQAYPNKVIKLQVPFAPGGTTDIVGRVIAEPLGKALGQTVIIENKAGGGGVIGATETARAVPD
GYSLGMATVSTTAANPAINPKVPYNPLTDFTPIINIAATPNIIAVHPSFPARTYKEFVAELKKNPGKYSYASSGTGGIGH
LQMELYKNLSGTFVTHIPYRGAGPALNDTVAGQVPIIFDNIPSALPFIQQKRLIPIVVAAPQRLAALPDVPTFKEVGLEP
VNRMAYYGILGPKGLPKEVVDKVSAGVKKALEDPAVRKRIEDTGSLVIANTPEQFAVQIKAEYEVYKKVVDTAKLKLE
>Mature_317_residues
SAVYALTLAVTAGPAWSQAYPNKVIKLQVPFAPGGTTDIVGRVIAEPLGKALGQTVIIENKAGGGGVIGATETARAVPDG
YSLGMATVSTTAANPAINPKVPYNPLTDFTPIINIAATPNIIAVHPSFPARTYKEFVAELKKNPGKYSYASSGTGGIGHL
QMELYKNLSGTFVTHIPYRGAGPALNDTVAGQVPIIFDNIPSALPFIQQKRLIPIVVAAPQRLAALPDVPTFKEVGLEPV
NRMAYYGILGPKGLPKEVVDKVSAGVKKALEDPAVRKRIEDTGSLVIANTPEQFAVQIKAEYEVYKKVVDTAKLKLE

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 33639; Mature: 33508

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAVYALTLAVTAGPAWSQAYPNKVIKLQVPFAPGGTTDIVGRVIAEPLGKALGQTVIIE
CCCEEEEEEEEECCCCHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEEE
NKAGGGGVIGATETARAVPDGYSLGMATVSTTAANPAINPKVPYNPLTDFTPIINIAATP
ECCCCCCEECCCHHHHCCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCC
NIIAVHPSFPARTYKEFVAELKKNPGKYSYASSGTGGIGHLQMELYKNLSGTFVTHIPYR
CEEEECCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHCCCCCEEEECCCC
GAGPALNDTVAGQVPIIFDNIPSALPFIQQKRLIPIVVAAPQRLAALPDVPTFKEVGLEP
CCCCCCCCCCCCCCCEEECCCCCHHHHHHHCCCEEEEEECCHHHHCCCCCCCHHHHCCCH
VNRMAYYGILGPKGLPKEVVDKVSAGVKKALEDPAVRKRIEDTGSLVIANTPEQFAVQIK
HHHHEEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCHHEEEEEE
AEYEVYKKVVDTAKLKLE
HHHHHHHHHHHHHHEECC
>Mature Secondary Structure 
SAVYALTLAVTAGPAWSQAYPNKVIKLQVPFAPGGTTDIVGRVIAEPLGKALGQTVIIE
CCEEEEEEEEECCCCHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEEE
NKAGGGGVIGATETARAVPDGYSLGMATVSTTAANPAINPKVPYNPLTDFTPIINIAATP
ECCCCCCEECCCHHHHCCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCC
NIIAVHPSFPARTYKEFVAELKKNPGKYSYASSGTGGIGHLQMELYKNLSGTFVTHIPYR
CEEEECCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHCCCCCEEEECCCC
GAGPALNDTVAGQVPIIFDNIPSALPFIQQKRLIPIVVAAPQRLAALPDVPTFKEVGLEP
CCCCCCCCCCCCCCCEEECCCCCHHHHHHHCCCEEEEEECCHHHHCCCCCCCHHHHCCCH
VNRMAYYGILGPKGLPKEVVDKVSAGVKKALEDPAVRKRIEDTGSLVIANTPEQFAVQIK
HHHHEEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCHHEEEEEE
AEYEVYKKVVDTAKLKLE
HHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2013566 [H]