Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91789054
Identifier: 91789054
GI number: 91789054
Start: 3378407
End: 3379363
Strand: Reverse
Name: 91789054
Synonym: Bpro_3194
Alternate gene names: NA
Gene position: 3379363-3378407 (Counterclockwise)
Preceding gene: 91789057
Following gene: 91789053
Centisome position: 64.98
GC content: 60.82
Gene sequence:
>957_bases TTGTCTGCTGTTTATGCGCTTACCCTGGCCGTCACGGCAGGTCCCGCATGGTCGCAGGCGTATCCCAACAAGGTCATCAA GCTGCAGGTGCCGTTTGCACCTGGCGGCACGACCGACATCGTGGGGCGCGTGATTGCCGAGCCACTGGGCAAGGCGCTGG GCCAGACCGTCATCATCGAGAACAAGGCAGGCGGAGGCGGCGTGATCGGCGCCACTGAAACAGCCCGTGCCGTGCCTGAT GGCTATTCGCTCGGCATGGCCACGGTGTCCACTACCGCAGCCAACCCGGCCATCAACCCCAAGGTTCCGTACAACCCGCT GACGGACTTCACGCCCATCATCAACATTGCAGCGACCCCCAACATCATTGCGGTGCACCCCAGCTTTCCCGCGAGGACCT ACAAGGAGTTTGTCGCGGAACTCAAGAAGAACCCCGGTAAATACTCGTATGCGTCATCAGGCACGGGCGGCATTGGCCAC CTGCAGATGGAGCTGTACAAAAACCTGAGCGGCACCTTTGTGACGCACATTCCGTACCGCGGCGCGGGGCCGGCCTTGAA CGATACGGTGGCGGGCCAGGTGCCCATCATTTTTGACAACATTCCTTCGGCCTTGCCGTTCATCCAGCAAAAGCGCCTGA TTCCGATTGTGGTGGCCGCACCGCAGCGCCTGGCGGCGCTGCCCGATGTACCAACTTTCAAGGAGGTGGGCCTGGAGCCG GTGAACCGCATGGCGTATTACGGCATTCTGGGCCCCAAGGGCCTGCCGAAAGAAGTGGTTGACAAGGTCAGCGCGGGGGT GAAGAAGGCGCTGGAAGATCCGGCCGTGCGCAAGCGCATTGAAGACACCGGCTCACTGGTCATTGCCAACACACCCGAGC AGTTTGCGGTGCAAATCAAGGCCGAGTACGAGGTGTATAAAAAGGTGGTCGATACGGCCAAGCTCAAGCTGGAGTGA
Upstream 100 bases:
>100_bases TATGCGTAATCCACAGCAGGCAGGCATGTGGCTTGCGTATACCATTCCATCTGTTTTGATTTTGAAGGACTTCACCATGC AACGTCGTTATCTGTTTGCC
Downstream 100 bases:
>100_bases GCCGGGGCTTCGGGCCATCAACCGCAAGCCGCCTTCGGGCGGCTTGTTGCGTTTTTGGCATGTTGACGCCCGGCAGCCCG CAGGAAATCCATTTCCAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MSAVYALTLAVTAGPAWSQAYPNKVIKLQVPFAPGGTTDIVGRVIAEPLGKALGQTVIIENKAGGGGVIGATETARAVPD GYSLGMATVSTTAANPAINPKVPYNPLTDFTPIINIAATPNIIAVHPSFPARTYKEFVAELKKNPGKYSYASSGTGGIGH LQMELYKNLSGTFVTHIPYRGAGPALNDTVAGQVPIIFDNIPSALPFIQQKRLIPIVVAAPQRLAALPDVPTFKEVGLEP VNRMAYYGILGPKGLPKEVVDKVSAGVKKALEDPAVRKRIEDTGSLVIANTPEQFAVQIKAEYEVYKKVVDTAKLKLE
Sequences:
>Translated_318_residues MSAVYALTLAVTAGPAWSQAYPNKVIKLQVPFAPGGTTDIVGRVIAEPLGKALGQTVIIENKAGGGGVIGATETARAVPD GYSLGMATVSTTAANPAINPKVPYNPLTDFTPIINIAATPNIIAVHPSFPARTYKEFVAELKKNPGKYSYASSGTGGIGH LQMELYKNLSGTFVTHIPYRGAGPALNDTVAGQVPIIFDNIPSALPFIQQKRLIPIVVAAPQRLAALPDVPTFKEVGLEP VNRMAYYGILGPKGLPKEVVDKVSAGVKKALEDPAVRKRIEDTGSLVIANTPEQFAVQIKAEYEVYKKVVDTAKLKLE >Mature_317_residues SAVYALTLAVTAGPAWSQAYPNKVIKLQVPFAPGGTTDIVGRVIAEPLGKALGQTVIIENKAGGGGVIGATETARAVPDG YSLGMATVSTTAANPAINPKVPYNPLTDFTPIINIAATPNIIAVHPSFPARTYKEFVAELKKNPGKYSYASSGTGGIGHL QMELYKNLSGTFVTHIPYRGAGPALNDTVAGQVPIIFDNIPSALPFIQQKRLIPIVVAAPQRLAALPDVPTFKEVGLEPV NRMAYYGILGPKGLPKEVVDKVSAGVKKALEDPAVRKRIEDTGSLVIANTPEQFAVQIKAEYEVYKKVVDTAKLKLE
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 33639; Mature: 33508
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVYALTLAVTAGPAWSQAYPNKVIKLQVPFAPGGTTDIVGRVIAEPLGKALGQTVIIE CCCEEEEEEEEECCCCHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEEE NKAGGGGVIGATETARAVPDGYSLGMATVSTTAANPAINPKVPYNPLTDFTPIINIAATP ECCCCCCEECCCHHHHCCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCC NIIAVHPSFPARTYKEFVAELKKNPGKYSYASSGTGGIGHLQMELYKNLSGTFVTHIPYR CEEEECCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHCCCCCEEEECCCC GAGPALNDTVAGQVPIIFDNIPSALPFIQQKRLIPIVVAAPQRLAALPDVPTFKEVGLEP CCCCCCCCCCCCCCCEEECCCCCHHHHHHHCCCEEEEEECCHHHHCCCCCCCHHHHCCCH VNRMAYYGILGPKGLPKEVVDKVSAGVKKALEDPAVRKRIEDTGSLVIANTPEQFAVQIK HHHHEEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCHHEEEEEE AEYEVYKKVVDTAKLKLE HHHHHHHHHHHHHHEECC >Mature Secondary Structure SAVYALTLAVTAGPAWSQAYPNKVIKLQVPFAPGGTTDIVGRVIAEPLGKALGQTVIIE CCEEEEEEEEECCCCHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEEE NKAGGGGVIGATETARAVPDGYSLGMATVSTTAANPAINPKVPYNPLTDFTPIINIAATP ECCCCCCEECCCHHHHCCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCC NIIAVHPSFPARTYKEFVAELKKNPGKYSYASSGTGGIGHLQMELYKNLSGTFVTHIPYR CEEEECCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHCCCCCEEEECCCC GAGPALNDTVAGQVPIIFDNIPSALPFIQQKRLIPIVVAAPQRLAALPDVPTFKEVGLEP CCCCCCCCCCCCCCCEEECCCCCHHHHHHHCCCEEEEEECCHHHHCCCCCCCHHHHCCCH VNRMAYYGILGPKGLPKEVVDKVSAGVKKALEDPAVRKRIEDTGSLVIANTPEQFAVQIK HHHHEEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCHHEEEEEE AEYEVYKKVVDTAKLKLE HHHHHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]