Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is bugT [H]

Identifier: 91788881

GI number: 91788881

Start: 3187456

End: 3188439

Strand: Reverse

Name: bugT [H]

Synonym: Bpro_3021

Alternate gene names: 91788881

Gene position: 3188439-3187456 (Counterclockwise)

Preceding gene: 91788882

Following gene: 91788880

Centisome position: 61.31

GC content: 67.48

Gene sequence:

>984_bases
ATGAAAAAAGCAAACCTCATCGTGGCCCTGGTCCTCTGCAGCTTCGGCCTGGGTCTGAGCCCAGGCGCCGTGGCCCAGGC
GCCGGCATATCCCACCAAGCCGATCCGCATGCTGGTTGGCTTCGCGCCGGGCGGTGCGGCGGACTATGTGGCGCGGGCCA
TGGGTGATGCGCTGGGCAAGACCATGGGCCAGCCCATCGTGGTTGAAAACCGCGCCGGCGCCGGGTCCAGCATAGCGGCG
GAGGCCGCGGCCAAGTCCGCACCGGACGGCTACACCGTGCTGATCGCCAGCCCGAGCAGCATCTCCGTCAATCCGGCGCT
CAATCCCAAGCTGGGCTACACCGCCCGCGACCTCACGCCCGTCACCAAGGTGAGCAGCTCGCCACTGGTGATTGCGGCGA
ATCCGGCCCTCGGCATCAACTCGGTGCAAGACCTGATTGCCCGGGCCAAAGCGGCCCCCGGCACGCTCAACTACGCCACC
TCCGGCAACGGCTCGGCGCCCCACCTGGGCGCCGCGCTGTTCCTTCAGCTCACCGGCGTGCAGATGACGCACATTCCGTT
TCGCGGCGGCGGCCCGGCGATTCAATCGGTGATCGCGGGCGACACGCAGCTGACTTTTGGCACGCCGCCGTCGGTGCTGC
CCATGGTGCAGGCGGGCCGTCTGCGCGGGCTGGCGGTCAGCACCCGTGAGCGCACGGCGCTGGTTCCCGGCATCGCGGGC
ATGGCAGAGGCGGGCCTGCCTGAATACAGCATCGAGTTCTGGTATGGCCTTTTTGTGCCGGCGGGTACGCCTCCAGCCAT
CGTGAAGAAAATATTTGACGCCGCCACCGTTGCGATGCAGCAACCCTCGGTCAGGGCCGCGCTGGCGCGCGAGGGTACTG
ACGTGTCGCTGTCCCAGTCGCCCGAGCAGTTTGCCGCGTTCCTGAACGACGACGCGAAGTTCTGGGTCAAGCTGGTCAAG
GACGCGGGCGTCAAGCTCGAGTGA

Upstream 100 bases:

>100_bases
ACCAGCACCTGGGCAAGATCGTGCTGTCCATGCCAGTTACACCCTGAACCGCGAACGCATACACGCACAGACGTATACAC
AAATCAAGGAGACATTCAGC

Downstream 100 bases:

>100_bases
AACTCGAAGAAACTCGAAGAAACCCGAAGAAGGTCGAGTGGTTGAATGGCGGGCGAGGCGCGATGCCCGCGGCCAGCCAG
CATGCAGCCGGTGGCCAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MKKANLIVALVLCSFGLGLSPGAVAQAPAYPTKPIRMLVGFAPGGAADYVARAMGDALGKTMGQPIVVENRAGAGSSIAA
EAAAKSAPDGYTVLIASPSSISVNPALNPKLGYTARDLTPVTKVSSSPLVIAANPALGINSVQDLIARAKAAPGTLNYAT
SGNGSAPHLGAALFLQLTGVQMTHIPFRGGGPAIQSVIAGDTQLTFGTPPSVLPMVQAGRLRGLAVSTRERTALVPGIAG
MAEAGLPEYSIEFWYGLFVPAGTPPAIVKKIFDAATVAMQQPSVRAALAREGTDVSLSQSPEQFAAFLNDDAKFWVKLVK
DAGVKLE

Sequences:

>Translated_327_residues
MKKANLIVALVLCSFGLGLSPGAVAQAPAYPTKPIRMLVGFAPGGAADYVARAMGDALGKTMGQPIVVENRAGAGSSIAA
EAAAKSAPDGYTVLIASPSSISVNPALNPKLGYTARDLTPVTKVSSSPLVIAANPALGINSVQDLIARAKAAPGTLNYAT
SGNGSAPHLGAALFLQLTGVQMTHIPFRGGGPAIQSVIAGDTQLTFGTPPSVLPMVQAGRLRGLAVSTRERTALVPGIAG
MAEAGLPEYSIEFWYGLFVPAGTPPAIVKKIFDAATVAMQQPSVRAALAREGTDVSLSQSPEQFAAFLNDDAKFWVKLVK
DAGVKLE
>Mature_327_residues
MKKANLIVALVLCSFGLGLSPGAVAQAPAYPTKPIRMLVGFAPGGAADYVARAMGDALGKTMGQPIVVENRAGAGSSIAA
EAAAKSAPDGYTVLIASPSSISVNPALNPKLGYTARDLTPVTKVSSSPLVIAANPALGINSVQDLIARAKAAPGTLNYAT
SGNGSAPHLGAALFLQLTGVQMTHIPFRGGGPAIQSVIAGDTQLTFGTPPSVLPMVQAGRLRGLAVSTRERTALVPGIAG
MAEAGLPEYSIEFWYGLFVPAGTPPAIVKKIFDAATVAMQQPSVRAALAREGTDVSLSQSPEQFAAFLNDDAKFWVKLVK
DAGVKLE

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 33401; Mature: 33401

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKANLIVALVLCSFGLGLSPGAVAQAPAYPTKPIRMLVGFAPGGAADYVARAMGDALGK
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHH
TMGQPIVVENRAGAGSSIAAEAAAKSAPDGYTVLIASPSSISVNPALNPKLGYTARDLTP
HCCCCEEEECCCCCCCCHHHHHHHCCCCCCEEEEEECCCCEEECCCCCCCCCCCHHCCCH
VTKVSSSPLVIAANPALGINSVQDLIARAKAAPGTLNYATSGNGSAPHLGAALFLQLTGV
HHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHEEEEEEECC
QMTHIPFRGGGPAIQSVIAGDTQLTFGTPPSVLPMVQAGRLRGLAVSTRERTALVPGIAG
EEEEEECCCCCHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCCEEECCCCCEEECCCCHH
MAEAGLPEYSIEFWYGLFVPAGTPPAIVKKIFDAATVAMQQPSVRAALAREGTDVSLSQS
HHHCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCC
PEQFAAFLNDDAKFWVKLVKDAGVKLE
HHHHHHHHCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKKANLIVALVLCSFGLGLSPGAVAQAPAYPTKPIRMLVGFAPGGAADYVARAMGDALGK
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHH
TMGQPIVVENRAGAGSSIAAEAAAKSAPDGYTVLIASPSSISVNPALNPKLGYTARDLTP
HCCCCEEEECCCCCCCCHHHHHHHCCCCCCEEEEEECCCCEEECCCCCCCCCCCHHCCCH
VTKVSSSPLVIAANPALGINSVQDLIARAKAAPGTLNYATSGNGSAPHLGAALFLQLTGV
HHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHEEEEEEECC
QMTHIPFRGGGPAIQSVIAGDTQLTFGTPPSVLPMVQAGRLRGLAVSTRERTALVPGIAG
EEEEEECCCCCHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCCEEECCCCCEEECCCCHH
MAEAGLPEYSIEFWYGLFVPAGTPPAIVKKIFDAATVAMQQPSVRAALAREGTDVSLSQS
HHHCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCC
PEQFAAFLNDDAKFWVKLVKDAGVKLE
HHHHHHHHCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11111902; 12910271; 2873570 [H]